Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08-
07] 28,081 sequences; 99,189,222 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq24749 452 7e-122
seq27938 268 2e-66
seq18890 178 2e-39
seq11514 156 8e-33
seq28027 111 3e-19
seq17 84.2 4e-11
>seq24749
Length=740841
Score = 452 bits (500), Expect = 7e-122
Identities = 1222/1852 (66%), Gaps = 67/1852 (4%)
Strand=Plus/Minus
Query 243761 GCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGG 243820
|| |||| ||| | |||||||||||||||||||||||| ||| |||| || || |
Sbjct 417414 GCAGCCTGGGTGCGCAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAGCCGGCGAAG 417355
Query 243821 TGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTG 243880
|||||| ||| | ||| ||| | ||||| | | | ||| | ||
Sbjct 417354 TGCATGCTCGTGATCTTGCCCATGGTA------GGGTCCTTCATGT---GAATG---TTC 417307
Query 243881 AGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGA-GGTCCTT 243939
| ||||||| |||||||| ||||| | || || || ||||| | | ||| |
Sbjct 417306 AAGGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACAACGGTGCG- 417248
Query 243940 CTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGAT 243999
|||||| ||||| | | |||||||| | || ||||| || |||| | |||
Sbjct 417247 CTGAGAAATCTCCCAGACAGTCTTGTACAGGGACTTGACGTCGGCGGGAATGTTGGGGAT 417188
Query 244000 GTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCC 244059
|||||| | || || || | | | |||| | | |||| |||| ||| || ||
Sbjct 417187 GTTCTGGATGGAACCATTCTCGGCAATGATGCGATTCTTCATGCTATCAGACCAAAGACC 417128
Query 244060 CAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCAC 244119
|| | | || ||| || ||| ||| || ||||| ||||| || | |||||
Sbjct 417127 CATGTCAACAAGATCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCGGCGAGCAC 417068
Query 244120 GCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTG 244179
||||||||||||| |||| || ||||||| || ||| ||||||| || |||||
Sbjct 417067 ACGGCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATCTG 417008
Query 244180 CGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTG 244239
|| || || || || |||||||||| ||| || |||||||| | ||||| || ||
Sbjct 417007 CGAGGTACTGGCCGTGGGCATGGGCGCCACGAGAAGACTGTTACGGACGCCATGTTGCTT 416948
Query 244240 GATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCC 244299
||| || |||| ||| ||||||||| | | | | ||| |||| |
Sbjct 416947 GATCTGGCTCTTGAGGTCGGCCCAGTCCCAAAGGTCAGT-AGGC--------TTGACGTT 416897
Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359
||||||||| | || || | |||| | |||||| |||||| ||||| | ||||||
Sbjct 416896 CCACATGTCGTATTGAAGGATACCCTGGGAGACGGGCGAGCCCTCATAGGTGGAGTAGGG 416837
Query 244360 ACCGTCGCGCTGGGCCAGCTTACAGCTC-TCGTCGAGGGCGGCGTAGTAGATGGTCTCGA 244418
|| || ||| || ||||| || | | ||| ||||| |||| |||||||||||| |
Sbjct 416836 GCCTTCCTCCTGAGCGAGCTTGCATGACATGGTC-AGGGCAGCGTGGTAGATGGTCTCAA 416778
Query 244419 AGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGA-----AGGGGATGCCCATCAT 244473
||||| |||||| | || ||||| |||| || |||| |||| |
Sbjct 416777 AGATCTGCTTGTTGAGCTCCTTGGCCT-----CAGGCGACTCAAAGGGCATGCGGAGAGC 416723
Query 244474 CATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA 244533
| ||| | || |||| ||||| || || | ||| ||||| | || ||| |||||
Sbjct 416722 AAGGAAAGCATCAGCCAAGCCCTGGACACCAAGGCCAATGGGCCGATGGCGCATGTTGCT 416663
Query 244534 GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGT 244593
| || ||| ||||||||| ||| ||||||| | | |||||||||| |
Sbjct 416662 GTTGCGAGCCTCGATGACGGGGTAATGGTTCACGTCGATGATCCTGTTGAGGTTCC---- 416607
Query 244594 GATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGAT 244653
|| |||||| | | | | | || | | || | || || | || || |
Sbjct 416606 -----TGACGACGACCTGAGTGACCTGGTGGAGCTT---CTTGAAGTCATACACGCCGTT 416555
Query 244654 GGTGATCCTCA-CAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCT 244712
| || | ||| | | || ||||| | |||||||||||||||||| ||||| |
Sbjct 416554 GTTG-TAATCAACGTAGGCGGGCAGGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCAT 416496
Query 244713 CCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGT 244772
| | | ||||| ||||||||| ||||| ||||| || ||||| || ||||
Sbjct 416495 CGGGTGCCGAGTACTCGACAATCTCTGTGCACAGGTTGGAGCTGCGAATGGTACCAAGGT 416436
Query 244773 GCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCT 244832
|| || ||| |||| ||||||| |||||||||||||||||||| |||||||
Sbjct 416435 TCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCT 416376
Query 244833 CGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT 244892
|| ||| || |||||||| || ||| || | | ||||||| ||| |||| |||
Sbjct 416375 CGGTCTGAGCCTCGAGGACGGCGTACCAAAGCTTCTGCGCCTTGATGGTCTTGCGGCCCT 416316
Query 244893 TGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTA 244952
|||| | |||||| ||||| |||||| |||||| || || || | |
Sbjct 416315 TGCCAGCCTTCTCGTACTTCTCGTACAAGGCCTCAAACTCGTCACCGTAGCAGTCAGCAA 416256
Query 244953 GGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCA 245012
|||| |||||| |||||||||||| |||| |||||| | || ||| | || ||
Sbjct 416255 GGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCA 416196
Query 245013 TGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGC 245072
||||||| ||||||||||| |||||| |||| || || | | | || ||| ||
Sbjct 416195 TGAAGAGATCGGGGATCCACAGGGCCAGGAAAAGATCGCGAGCGCGAACTTCCTCCTTGC 416136
Query 245073 CAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGA 245132
| |||||| | || || | || || ||||| || ||||||| ||||| | |||||
Sbjct 416135 CGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGA 416076
Query 245133 CAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGA 245192
|| | |||||||| ||||||||||| |||||||| || | | | |||||
Sbjct 416075 TGGCAAAAGCGCCGGGACGCTTGTTGCCGCCCTGGTCAACGTAGCGCGCCGTGTTGTTGA 416016
Query 245193 AGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGC 245252
||| ||| || | ||| |||||||| || |||||||||||| ||||| | ||
Sbjct 416015 AGACGCGAAGCATGGGCGTGATGCCGTTTGAAGTGCCGTTGGTGCCGGCAATGTAAGAGC 415956
Query 245253 CCTTGCCCCTGAGGTTGCTGATGGA----CATGCCTAGTCCGCCGGCGTGCTTGGAGATG 245308
| || | | || ||| |||||| || || | || || || |||||||||
Sbjct 415955 CAGTGGCAC---GGATGC-GATGGACGTTCAGACCAATACCACCAGCCATCTTGGAGATC 415900
Query 245309 AGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGC 245368
| ||| ||| |||||| |||||| || || || |||||||| |||||||| | |
Sbjct 415899 ATGGCACAGGTCTTGAGGGTGTCGTAGATACCTTCAATGCTGTCATCCTTCATGTCAACC 415840
Query 245369 AGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCG 245428
|| |||||||| |||||||| | || || ||| | |||||| || || || |||
Sbjct 415839 AGGAAGCAGGACGACAGCTGAGCCTGAGGCGTGCCAGCGTTGAAGAGGGTAGGAGATGCG 415780
Query 245429 TGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCG 245488
|| || ||| | ||| || | || |||||||| | | | || | ||||||
Sbjct 415779 TGTGTGAAGAATTTGCTGGACATGAGGTTGTACGTCTCAATGACACGCTCAACGTTGTCT 415720
Query 245489 CCGTGGAT-CTGCAGGGCGCACCTCATGAGGGTGTGCTG-GGGCGTCTCG---ATGGGTC 245543
|| ||| | | || || | ||| | ||||||| ||||| |||| || |
Sbjct 415719 CCCCAGATACCGACGGAAACA-CGCATAATCATGTGCTGCGGGCG-CTCGGCAATCTTGC 415662
Query 245544 CCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTA 245595
| || | |||||| | ||||| ||||| || |||||||| ||||||||
Sbjct 415661 CGTCAAG---CTTGAGGAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTA 415613
Score = 199 bits (220), Expect = 7e-46
Identities = 564/859 (66%), Gaps = 37/859 (4%)
Strand=Plus/Plus
Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796
||| |||| |||| || || | || |||| ||| | ||||||||||||||||||||||
Sbjct 446566 ACGGTGAATTGGATAGGGGCCGCAGCAGCCTGGGTGCGCAGGTAGTACATGCCGGTCTTG 446625
Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856
|| ||| |||| || || ||||||| ||| | ||| ||| | |||
Sbjct 446626 AGGCCAAGCTTCCAGCCGGCGAAGTGCATGCTCGTGATCTTGCCCATGGTA------GGG 446679
Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916
|| | | | ||| | || | |||||| |||||||| ||||| | || ||
Sbjct 446680 TCCTTCATGT---GAATG---TTCAAGGACTGAGACTGGTCGATGAAGGCACCACGATCG 446733
Query 243917 GCGGCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975
|| ||||| | || ||| | |||||| ||||| | | |||||||| | || |||
Sbjct 446734 GCAGCCATCTGAACGACGGTGCG-CTGAGAAATCTCCCAGACAGTCTTGTACAGGGACTT 446792
Query 243976 GAGGTGCTCGGGGAACCCTTCGA-TGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGG 244034
|| || |||| || | || ||||||| | || || || | | |||| ||
Sbjct 446793 GATGTCGGCGGG-AATGTTGGGAATGTTCTGGATGGAACCATTTTCTGCAATGATGCGGT 446851
Query 244035 TGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCA 244094
| |||| |||| ||| || |||| | | || ||| || ||| ||| |
Sbjct 446852 TCTTCATGCTATCAGACCAAAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGA 446911
Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154
| ||||| ||||| || | ||||| ||||||||||||| |||| || |||||||
Sbjct 446912 CGACCTGGAACTCGCCGGCGAGCACACGGCGCTGGTAGATGTTGGACGTGTAAGGCTCGA 446971
Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214
|| ||| ||||||| || ||||||| || || || || |||||||||| ||| || |
Sbjct 446972 AGCACTCGTTGTTGCCAAGGATCTGCGAGGTACTGGCCGTGGGCATGGGCGCCACGAGAA 447031
Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274
||||||| | ||||| || || ||| || |||| ||| ||||||||
Sbjct 447032 GACTGTTACGGACGCCATGTTGCTTGATCTGGCTCTTGAGGTCGGCCCAGTCCC------ 447085
Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334
| ||||| | |||| | ||||||||| | || || | |||| | |||||
Sbjct 447086 ---AAAGGTCAGTAGGCTTGACGTTCCACATGTCGTATTGAAGGATACCCTGGGAGACGG 447142
Query 244335 GGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACA-GCTCTCGTCG 244393
| |||||| ||||| | |||||| || || ||| || ||||| || | | |||
Sbjct 447143 GCGAGCCCTCATAGGTGGAGTAGGGGCCTTCCTCCTGAGCGAGCTTGCATGACATGGTC- 447201
Query 244394 AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG 244453
||||| |||| |||||||||||| |||||| |||||| | || | | ||| |||
Sbjct 447202 AGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTC-----CTTGGCCTCAG 447256
Query 244454 GTG-----AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508
| | ||||| |||| | | ||| | || |||| ||||| || || | ||
Sbjct 447257 GCGACTCAAAGGGCATGCGGAGAGCAAGGAAAGCATCAGCCAAGCCCTGGACACCAAGGC 447316
Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568
| ||||| | || ||| ||||| | || ||| |||||||| ||| |||
Sbjct 447317 CAATGGGCCGATGGCGCATGTTGCTGTTGCGAGCCTCGATGACGGGGTAGTGGTTCACGT 447376
Query 244569 CGATCACCTTGTTGAGGTT 244587
|||| | | ||||||||||
Sbjct 447377 CGATGATCCTGTTGAGGTT 447395
>seq27938
Length=10276
Score = 268 bits (296), Expect = 2e-66
Identities = 461/667 (69%), Gaps = 8/667 (1%)
Strand=Plus/Plus
Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746
|||||||||||||||||| ||||| || | | ||||| ||||||||| ||||| ||
Sbjct 9614 GGCCAGGTTGCAGACGGCAACCTCATCGGGTGCCGAGTACTCGACAATCTCTGTGCACAG 9673
Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806
||| || ||||| || |||| || || ||| |||| ||||||| |||||
Sbjct 9674 GTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTT 9733
Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866
||||||||||||||| ||||||||| ||| || |||||||| || ||| || |
Sbjct 9734 GTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGACGGCGTACCAAAGCTT 9793
Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926
| ||||||| ||| |||| ||||||| | |||||| ||||| ||||||
Sbjct 9794 CTGCGCCTTGATGGTCTTGCGGCCCTTGCCAGCCTTCTCGTACTTCTCGTACAAGGCCTC 9853
Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCA 244986
|||||| || || || | ||||| |||||| |||||||||||| ||||
Sbjct 9854 AAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCA 9913
Query 244987 CTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAG 245046
|||||| | || ||| | || ||||||||| ||||||||||| |||||| |||| ||
Sbjct 9914 GTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCACAGGGCCAGGAAAAG 9973
Query 245047 GTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGAC 245106
|| | | | || ||| ||| |||||| | || || | || || |||||
Sbjct 9974 ATCGCGAGCGCGAACTTCCTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGAC 10033
Query 245107 GTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTG 245166
|| ||||||| ||||| | ||||| || | |||||||| ||||||||||| |||||
Sbjct 10034 ATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGCGCCGGGACGCTTGTTGCCGCCCTG 10093
Query 245167 GTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTG 245226
||| || | | | |||||||| ||| || | ||| |||||||| ||
Sbjct 10094 GTCAACGTAGCGCGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTTGAAGT 10153
Query 245227 GCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGA----CATGC 245282
|||||||||||| ||||| | ||| || | | || ||| |||||| || |
Sbjct 10154 GCCGTTGGTGCCGGCAATGTAAGAGCCAGTGGCAC---GGATGC-GATGGACGTTCAGAC 10209
Query 245283 CTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCT 245342
| | || || || ||||||||| | ||| ||| |||||| |||||| || || |
Sbjct 10210 CAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCTT 10269
Query 245343 CCATGCT 245349
| |||||
Sbjct 10270 CAATGCT 10276
>seq18890
Length=446397
Score = 178 bits (196), Expect = 2e-39
Identities = 310/433 (72%), Gaps = 21/433 (5%)
Strand=Plus/Minus
Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGG 42780
||| ||||| ||||||||| || ||||||||||||||||||||||||||| || |||
Sbjct 160472 CGTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGG 160413
Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840
|| ||||| || || || ||||| ||||| |||||| | |||||||| || || |
Sbjct 160412 CCTC-ATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACA 160354
Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCTCG-AAGGAGC 42897
||||| || || || |||||||| ||| | | |||| |||| | ||| ||
Sbjct 160353 CCGACTTCGCTTGTCTGCTGTTCTC---TCACTT---GAACAACCGCCCCAGCAAGCAGA 160300
Query 42898 GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGC 42957
|||| | ||| |||| || || || | || ||| | |||||||| || || | |
Sbjct 160299 CTGTCCAAGACATTGTCACCGATGCTGTCAATATTGAGCAAGAGTTCCTGACTGAGGCTC 160240
Query 42958 TGCCC-GTGTCCCTGGTCGGCATGAACCACGAC-CTCATGTGCAAGTACATCCAGTACGT 43015
| ||| ||| |||| |||||||||| | | || |||||| ||||||| ||| |||
Sbjct 160239 TCCCCTGTG-GCCTGCTCGGCATGAA-CGCTACTCTCATGAAGCAGTACATTGAGTTCGT 160182
Query 43016 CGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGCCGTGCCC 43072
|| |||| ||||| || ||| | || | || | | ||||| | | |||
Sbjct 160181 TGCAGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTTTACAAGGCTACCAACCC 160125
Query 43073 CTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGT 43132
|||||||| ||||||||||| || | | |||||||||||||| ||||||||||| ||
Sbjct 160124 ATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGT 160065
Query 43133 CGCCGACTACCAG 43145
||| || ||||||
Sbjct 160064 CGCTGATTACCAG 160052
Score = 140 bits (154), Expect = 6e-28
Identities = 287/409 (70%), Gaps = 21/409 (5%)
Strand=Plus/Plus
Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGG 42780
||| ||||| ||||||||| || ||||||||||||||||||||||||||| || |||
Sbjct 409158 CGTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGG 409217
Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840
|| ||||| || || || ||||| ||||| |||||| | |||||||| || || |
Sbjct 409218 CCTC-ATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACA 409276
Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCTCG-AAGGAGC 42897
||||| || || || |||||||| ||| | | |||| |||| | ||| ||
Sbjct 409277 CCGACTTCGCTTGTCTGCTGTTCTC---TCACTT---GAACAACCGCCCCAGCAAGCAGA 409330
Query 42898 GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGC 42957
|||| | || |||| || || || |||||| |||||||||| || || | |
Sbjct 409331 CTGTCCAAGATATTGTCACCGATGCTGTCACTATCGAGCAGGAGTTCCTGACTGAGGCTC 409390
Query 42958 TGCCC-GTGTCCCTGGTCGGCATGAACCACGAC-CTCATGTGCAAGTACATCCAGTACGT 43015
| ||| ||| ||| | |||||||| | | || |||||| ||||||| ||| |||
Sbjct 409391 TTCCCTGTG-GTCTGCTTGGCATGAA-CGCTACTCTCATGAAGCAGTACATTGAGTTCGT 409448
Query 43016 CGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGCCGTGCCC 43072
|| |||| ||||| || ||| | || | || | | ||||| | | |||
Sbjct 409449 TGCAGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTTTACAAGGCTACCAACCC 409505
Query 43073 CTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTC 43121
|||||||| ||||||||||| || | | |||||||||||||| |||
Sbjct 409506 ATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTCTTC 409554
Score = 122 bits (134), Expect = 2e-22
Identities = 227/327 (69%), Gaps = 11/327 (3%)
Strand=Plus/Minus
Query 42309 ATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA 42367
|||||||||||||| | || | || |||||||||||| |||||||| ||| |||||||
Sbjct 160946 ATGTACAAGAAGGCAGAAGCT-TCTTTCTGGACCGCCGAAGAGATTGATCTGTCCAAGGA 160888
Query 42368 CACGGCCGGCTGGGAGT-CACTGTC--TGAGAACGAAAAGTTTTTCCTCAAAAACATACT 42424
|| |||| | || || ||| | ||||||| ||| || | |||| ||
Sbjct 160887 TCTCCACGACTGGAACAACAAGATCAATGACGATGAAAAGTACTTCATCTCACACATCCT 160828
Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484
|||||||| ||||| || || ||||| ||||| |||||||| | | ||||
Sbjct 160827 TGCCTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTCGTTGAGCGCTTCAGTGC 160768
Query 42485 AGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544
||||| ||| ||||| || |||||||||||||||||||| || |||||| |
Sbjct 160767 CGAGGTCCAGGTTCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATGATGGAGAACAT 160708
Query 42545 GCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGCG 42601
||||||||| ||| | ||||||| |||| |||||| ||| || | | || |
Sbjct 160707 CCACTCTGAGACTTACTC---GCTGCTCATTGACACCTACATCAAGGAGCCTGCCCAGAG 160651
Query 42602 TAACGGGCTGTTCAAGGCCATGGAGAC 42628
| | || ||||| ||||| || ||
Sbjct 160650 GACCTATCTCTTCAATGCCATCGATAC 160624
Score = 114 bits (126), Expect = 2e-20
Identities = 223/326 (68%), Gaps = 9/326 (3%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| || ||| |||||||||||| |||||||| || | |||||
Sbjct 408685 ATGTACAAGAAGGCAGAGGCTTCCTTCTGGACCGCCGAAGAGATTGATCTATCTAAGGAT 408744
Query 42369 ACGGCCGGCTGGGAGT-CACTGTC--TGAGAACGAAAAGTTTTTCCTCAAAAACATACTG 42425
|| |||| | || || ||| | ||||||| ||| || | |||| ||
Sbjct 408745 CTCCACGACTGGAACAACAAGATCAATGATGATGAAAAGTACTTCATCTCACACATCCTT 408804
Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485
|||||||| ||||| || || ||||| ||||| |||||||| | | ||||
Sbjct 408805 GCCTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTCGTTGAGCGCTTCAGTGCC 408864
Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545
||||| ||| |||||| || |||||||||||||||||||| || |||||| |
Sbjct 408865 GAGGTCCAGGTTCCTGAGGCTCGATGCTTCTACGGCTTCCAGATTATGATGGAGAACATC 408924
Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGCGT 42602
||||| ||| ||| | ||||||| |||| |||||| || || | | || |
Sbjct 408925 CACTCCGAGACTTACTC---GCTGCTCATTGACACCTACATCAAAGAGCCTGCCCAGAGG 408981
Query 42603 AACGGGCTGTTCAAGGCCATGGAGAC 42628
| | || ||||| ||||| || ||
Sbjct 408982 ACCTATCTCTTCAATGCCATCGATAC 409007
>seq11514
Length=5315
Score = 156 bits (172), Expect = 8e-33
Identities = 241/343 (70%), Gaps = 11/343 (3%)
Strand=Plus/Plus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | ||||| ||||||||||||| |||| || ||
Sbjct 18 GTTGACGACCTGGAACTCGCCGGCGAGCACACGGCGCTGGTAGATGTTGGACGTGTAAGG 77
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||||| || ||| ||||||| || ||||||| || || || || |||||||||| |||
Sbjct 78 CTCGAAGCACTCGTTGTTGCCAAGGATCTGCGAGGTACTGGCCGTGGGCATGGGCGCCAC 137
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269
|| |||||||| | ||||| || || ||| || |||| ||| ||||||||
Sbjct 138 GAGAAGACTGTTACGGACGCCATGTTGCTTGATCTGGCTCTTGAGGTCGGCCCAGTCCC- 196
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
| ||||| | |||| | ||||||||| | || || | |||| |
Sbjct 197 --------AAAGGTCAGTAGGCTTGACGTTCCACATGTCGTATTGAAGGATACCCTGGGA 248
Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACA-GCTCT 244388
|||||| |||||| ||||| | |||||| || || ||| || ||||| || | |
Sbjct 249 GACGGGCGAGCCCTCATAGGTGGAGTAGGGGCCTTCCTCCTGAGCGAGCTTGCATGACAT 308
Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTT 244431
||| ||||| |||| |||||||||||| |||||| ||||||
Sbjct 309 GGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTT 350
>seq28027
Length=10271
Score = 111 bits (122), Expect = 3e-19
Identities = 113/145 (78%), Gaps = 2/145 (1%)
Strand=Plus/Minus
Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGG 42780
||| ||||| ||||||||| || ||||||||||||||||||||||||||| || |||
Sbjct 5241 CGTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGG 5182
Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840
|| ||||| || || || ||||| ||||| |||||| | |||||||| || || |
Sbjct 5181 CCTC-ATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACA 5123
Query 42841 GGGACTTTGCCTGCCTCCTGTTCTC 42865
||||| || || || ||||||||
Sbjct 5122 CCGACTTCGCTTGTCTGCTGTTCTC 5098
>seq17
Length=218
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129
||| |||||||| ||||||||||| || | | |||||||||||||| |||||||||||
Sbjct 123 CCCATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTCTTCGAGAAGCG 64
Query 43130 CGTCGCCGACTACCAG 43145
||||| || ||||||
Sbjct 63 TGTCGCTGATTACCAG 48
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944007725136560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |