Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08- 07] 28,081 sequences; 99,189,222 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq24749 452 7e-122 seq27938 268 2e-66 seq18890 178 2e-39 seq11514 156 8e-33 seq28027 111 3e-19 seq17 84.2 4e-11 >seq24749 Length=740841 Score = 452 bits (500), Expect = 7e-122 Identities = 1222/1852 (66%), Gaps = 67/1852 (4%) Strand=Plus/Minus Query 243761 GCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGG 243820 || |||| ||| | |||||||||||||||||||||||| ||| |||| || || | Sbjct 417414 GCAGCCTGGGTGCGCAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAGCCGGCGAAG 417355 Query 243821 TGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTG 243880 |||||| ||| | ||| ||| | ||||| | | | ||| | || Sbjct 417354 TGCATGCTCGTGATCTTGCCCATGGTA------GGGTCCTTCATGT---GAATG---TTC 417307 Query 243881 AGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGA-GGTCCTT 243939 | ||||||| |||||||| ||||| | || || || ||||| | | ||| | Sbjct 417306 AAGGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACAACGGTGCG- 417248 Query 243940 CTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGAT 243999 |||||| ||||| | | |||||||| | || ||||| || |||| | ||| Sbjct 417247 CTGAGAAATCTCCCAGACAGTCTTGTACAGGGACTTGACGTCGGCGGGAATGTTGGGGAT 417188 Query 244000 GTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCC 244059 |||||| | || || || | | | |||| | | |||| |||| ||| || || Sbjct 417187 GTTCTGGATGGAACCATTCTCGGCAATGATGCGATTCTTCATGCTATCAGACCAAAGACC 417128 Query 244060 CAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCAC 244119 || | | || ||| || ||| ||| || ||||| ||||| || | ||||| Sbjct 417127 CATGTCAACAAGATCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCGGCGAGCAC 417068 Query 244120 GCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTG 244179 ||||||||||||| |||| || ||||||| || ||| ||||||| || ||||| Sbjct 417067 ACGGCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATCTG 417008 Query 244180 CGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTG 244239 || || || || || |||||||||| ||| || |||||||| | ||||| || || Sbjct 417007 CGAGGTACTGGCCGTGGGCATGGGCGCCACGAGAAGACTGTTACGGACGCCATGTTGCTT 416948 Query 244240 GATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCC 244299 ||| || |||| ||| ||||||||| | | | | ||| |||| | Sbjct 416947 GATCTGGCTCTTGAGGTCGGCCCAGTCCCAAAGGTCAGT-AGGC--------TTGACGTT 416897 Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359 ||||||||| | || || | |||| | |||||| |||||| ||||| | |||||| Sbjct 416896 CCACATGTCGTATTGAAGGATACCCTGGGAGACGGGCGAGCCCTCATAGGTGGAGTAGGG 416837 Query 244360 ACCGTCGCGCTGGGCCAGCTTACAGCTC-TCGTCGAGGGCGGCGTAGTAGATGGTCTCGA 244418 || || ||| || ||||| || | | ||| ||||| |||| |||||||||||| | Sbjct 416836 GCCTTCCTCCTGAGCGAGCTTGCATGACATGGTC-AGGGCAGCGTGGTAGATGGTCTCAA 416778 Query 244419 AGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGA-----AGGGGATGCCCATCAT 244473 ||||| |||||| | || ||||| |||| || |||| |||| | Sbjct 416777 AGATCTGCTTGTTGAGCTCCTTGGCCT-----CAGGCGACTCAAAGGGCATGCGGAGAGC 416723 Query 244474 CATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA 244533 | ||| | || |||| ||||| || || | ||| ||||| | || ||| ||||| Sbjct 416722 AAGGAAAGCATCAGCCAAGCCCTGGACACCAAGGCCAATGGGCCGATGGCGCATGTTGCT 416663 Query 244534 GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGT 244593 | || ||| ||||||||| ||| ||||||| | | |||||||||| | Sbjct 416662 GTTGCGAGCCTCGATGACGGGGTAATGGTTCACGTCGATGATCCTGTTGAGGTTCC---- 416607 Query 244594 GATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGAT 244653 || |||||| | | | | | || | | || | || || | || || | Sbjct 416606 -----TGACGACGACCTGAGTGACCTGGTGGAGCTT---CTTGAAGTCATACACGCCGTT 416555 Query 244654 GGTGATCCTCA-CAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCT 244712 | || | ||| | | || ||||| | |||||||||||||||||| ||||| | Sbjct 416554 GTTG-TAATCAACGTAGGCGGGCAGGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCAT 416496 Query 244713 CCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGT 244772 | | | ||||| ||||||||| ||||| ||||| || ||||| || |||| Sbjct 416495 CGGGTGCCGAGTACTCGACAATCTCTGTGCACAGGTTGGAGCTGCGAATGGTACCAAGGT 416436 Query 244773 GCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCT 244832 || || ||| |||| ||||||| |||||||||||||||||||| ||||||| Sbjct 416435 TCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCT 416376 Query 244833 CGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT 244892 || ||| || |||||||| || ||| || | | ||||||| ||| |||| ||| Sbjct 416375 CGGTCTGAGCCTCGAGGACGGCGTACCAAAGCTTCTGCGCCTTGATGGTCTTGCGGCCCT 416316 Query 244893 TGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTA 244952 |||| | |||||| ||||| |||||| |||||| || || || | | Sbjct 416315 TGCCAGCCTTCTCGTACTTCTCGTACAAGGCCTCAAACTCGTCACCGTAGCAGTCAGCAA 416256 Query 244953 GGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCA 245012 |||| |||||| |||||||||||| |||| |||||| | || ||| | || || Sbjct 416255 GGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCA 416196 Query 245013 TGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGC 245072 ||||||| ||||||||||| |||||| |||| || || | | | || ||| || Sbjct 416195 TGAAGAGATCGGGGATCCACAGGGCCAGGAAAAGATCGCGAGCGCGAACTTCCTCCTTGC 416136 Query 245073 CAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGA 245132 | |||||| | || || | || || ||||| || ||||||| ||||| | ||||| Sbjct 416135 CGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGA 416076 Query 245133 CAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGA 245192 || | |||||||| ||||||||||| |||||||| || | | | ||||| Sbjct 416075 TGGCAAAAGCGCCGGGACGCTTGTTGCCGCCCTGGTCAACGTAGCGCGCCGTGTTGTTGA 416016 Query 245193 AGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGC 245252 ||| ||| || | ||| |||||||| || |||||||||||| ||||| | || Sbjct 416015 AGACGCGAAGCATGGGCGTGATGCCGTTTGAAGTGCCGTTGGTGCCGGCAATGTAAGAGC 415956 Query 245253 CCTTGCCCCTGAGGTTGCTGATGGA----CATGCCTAGTCCGCCGGCGTGCTTGGAGATG 245308 | || | | || ||| |||||| || || | || || || ||||||||| Sbjct 415955 CAGTGGCAC---GGATGC-GATGGACGTTCAGACCAATACCACCAGCCATCTTGGAGATC 415900 Query 245309 AGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGC 245368 | ||| ||| |||||| |||||| || || || |||||||| |||||||| | | Sbjct 415899 ATGGCACAGGTCTTGAGGGTGTCGTAGATACCTTCAATGCTGTCATCCTTCATGTCAACC 415840 Query 245369 AGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCG 245428 || |||||||| |||||||| | || || ||| | |||||| || || || ||| Sbjct 415839 AGGAAGCAGGACGACAGCTGAGCCTGAGGCGTGCCAGCGTTGAAGAGGGTAGGAGATGCG 415780 Query 245429 TGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCG 245488 || || ||| | ||| || | || |||||||| | | | || | |||||| Sbjct 415779 TGTGTGAAGAATTTGCTGGACATGAGGTTGTACGTCTCAATGACACGCTCAACGTTGTCT 415720 Query 245489 CCGTGGAT-CTGCAGGGCGCACCTCATGAGGGTGTGCTG-GGGCGTCTCG---ATGGGTC 245543 || ||| | | || || | ||| | ||||||| ||||| |||| || | Sbjct 415719 CCCCAGATACCGACGGAAACA-CGCATAATCATGTGCTGCGGGCG-CTCGGCAATCTTGC 415662 Query 245544 CCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTA 245595 | || | |||||| | ||||| ||||| || |||||||| |||||||| Sbjct 415661 CGTCAAG---CTTGAGGAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTA 415613 Score = 199 bits (220), Expect = 7e-46 Identities = 564/859 (66%), Gaps = 37/859 (4%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| |||| |||| || || | || |||| ||| | |||||||||||||||||||||| Sbjct 446566 ACGGTGAATTGGATAGGGGCCGCAGCAGCCTGGGTGCGCAGGTAGTACATGCCGGTCTTG 446625 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || ||| |||| || || ||||||| ||| | ||| ||| | ||| Sbjct 446626 AGGCCAAGCTTCCAGCCGGCGAAGTGCATGCTCGTGATCTTGCCCATGGTA------GGG 446679 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 || | | | ||| | || | |||||| |||||||| ||||| | || || Sbjct 446680 TCCTTCATGT---GAATG---TTCAAGGACTGAGACTGGTCGATGAAGGCACCACGATCG 446733 Query 243917 GCGGCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 || ||||| | || ||| | |||||| ||||| | | |||||||| | || ||| Sbjct 446734 GCAGCCATCTGAACGACGGTGCG-CTGAGAAATCTCCCAGACAGTCTTGTACAGGGACTT 446792 Query 243976 GAGGTGCTCGGGGAACCCTTCGA-TGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGG 244034 || || |||| || | || ||||||| | || || || | | |||| || Sbjct 446793 GATGTCGGCGGG-AATGTTGGGAATGTTCTGGATGGAACCATTTTCTGCAATGATGCGGT 446851 Query 244035 TGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCA 244094 | |||| |||| ||| || |||| | | || ||| || ||| ||| | Sbjct 446852 TCTTCATGCTATCAGACCAAAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGA 446911 Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154 | ||||| ||||| || | ||||| ||||||||||||| |||| || ||||||| Sbjct 446912 CGACCTGGAACTCGCCGGCGAGCACACGGCGCTGGTAGATGTTGGACGTGTAAGGCTCGA 446971 Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214 || ||| ||||||| || ||||||| || || || || |||||||||| ||| || | Sbjct 446972 AGCACTCGTTGTTGCCAAGGATCTGCGAGGTACTGGCCGTGGGCATGGGCGCCACGAGAA 447031 Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274 ||||||| | ||||| || || ||| || |||| ||| |||||||| Sbjct 447032 GACTGTTACGGACGCCATGTTGCTTGATCTGGCTCTTGAGGTCGGCCCAGTCCC------ 447085 Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334 | ||||| | |||| | ||||||||| | || || | |||| | ||||| Sbjct 447086 ---AAAGGTCAGTAGGCTTGACGTTCCACATGTCGTATTGAAGGATACCCTGGGAGACGG 447142 Query 244335 GGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACA-GCTCTCGTCG 244393 | |||||| ||||| | |||||| || || ||| || ||||| || | | ||| Sbjct 447143 GCGAGCCCTCATAGGTGGAGTAGGGGCCTTCCTCCTGAGCGAGCTTGCATGACATGGTC- 447201 Query 244394 AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG 244453 ||||| |||| |||||||||||| |||||| |||||| | || | | ||| ||| Sbjct 447202 AGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTC-----CTTGGCCTCAG 447256 Query 244454 GTG-----AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 | | ||||| |||| | | ||| | || |||| ||||| || || | || Sbjct 447257 GCGACTCAAAGGGCATGCGGAGAGCAAGGAAAGCATCAGCCAAGCCCTGGACACCAAGGC 447316 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 | ||||| | || ||| ||||| | || ||| |||||||| ||| ||| Sbjct 447317 CAATGGGCCGATGGCGCATGTTGCTGTTGCGAGCCTCGATGACGGGGTAGTGGTTCACGT 447376 Query 244569 CGATCACCTTGTTGAGGTT 244587 |||| | | |||||||||| Sbjct 447377 CGATGATCCTGTTGAGGTT 447395 >seq27938 Length=10276 Score = 268 bits (296), Expect = 2e-66 Identities = 461/667 (69%), Gaps = 8/667 (1%) Strand=Plus/Plus Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 |||||||||||||||||| ||||| || | | ||||| ||||||||| ||||| || Sbjct 9614 GGCCAGGTTGCAGACGGCAACCTCATCGGGTGCCGAGTACTCGACAATCTCTGTGCACAG 9673 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 ||| || ||||| || |||| || || ||| |||| ||||||| ||||| Sbjct 9674 GTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTT 9733 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 ||||||||||||||| ||||||||| ||| || |||||||| || ||| || | Sbjct 9734 GTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGACGGCGTACCAAAGCTT 9793 Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926 | ||||||| ||| |||| ||||||| | |||||| ||||| |||||| Sbjct 9794 CTGCGCCTTGATGGTCTTGCGGCCCTTGCCAGCCTTCTCGTACTTCTCGTACAAGGCCTC 9853 Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCA 244986 |||||| || || || | ||||| |||||| |||||||||||| |||| Sbjct 9854 AAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCA 9913 Query 244987 CTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAG 245046 |||||| | || ||| | || ||||||||| ||||||||||| |||||| |||| || Sbjct 9914 GTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCACAGGGCCAGGAAAAG 9973 Query 245047 GTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGAC 245106 || | | | || ||| ||| |||||| | || || | || || ||||| Sbjct 9974 ATCGCGAGCGCGAACTTCCTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGAC 10033 Query 245107 GTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTG 245166 || ||||||| ||||| | ||||| || | |||||||| ||||||||||| ||||| Sbjct 10034 ATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGCGCCGGGACGCTTGTTGCCGCCCTG 10093 Query 245167 GTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTG 245226 ||| || | | | |||||||| ||| || | ||| |||||||| || Sbjct 10094 GTCAACGTAGCGCGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTTGAAGT 10153 Query 245227 GCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGA----CATGC 245282 |||||||||||| ||||| | ||| || | | || ||| |||||| || | Sbjct 10154 GCCGTTGGTGCCGGCAATGTAAGAGCCAGTGGCAC---GGATGC-GATGGACGTTCAGAC 10209 Query 245283 CTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCT 245342 | | || || || ||||||||| | ||| ||| |||||| |||||| || || | Sbjct 10210 CAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCTT 10269 Query 245343 CCATGCT 245349 | ||||| Sbjct 10270 CAATGCT 10276 >seq18890 Length=446397 Score = 178 bits (196), Expect = 2e-39 Identities = 310/433 (72%), Gaps = 21/433 (5%) Strand=Plus/Minus Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGG 42780 ||| ||||| ||||||||| || ||||||||||||||||||||||||||| || ||| Sbjct 160472 CGTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGG 160413 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 || ||||| || || || ||||| ||||| |||||| | |||||||| || || | Sbjct 160412 CCTC-ATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACA 160354 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCTCG-AAGGAGC 42897 ||||| || || || |||||||| ||| | | |||| |||| | ||| || Sbjct 160353 CCGACTTCGCTTGTCTGCTGTTCTC---TCACTT---GAACAACCGCCCCAGCAAGCAGA 160300 Query 42898 GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGC 42957 |||| | ||| |||| || || || | || ||| | |||||||| || || | | Sbjct 160299 CTGTCCAAGACATTGTCACCGATGCTGTCAATATTGAGCAAGAGTTCCTGACTGAGGCTC 160240 Query 42958 TGCCC-GTGTCCCTGGTCGGCATGAACCACGAC-CTCATGTGCAAGTACATCCAGTACGT 43015 | ||| ||| |||| |||||||||| | | || |||||| ||||||| ||| ||| Sbjct 160239 TCCCCTGTG-GCCTGCTCGGCATGAA-CGCTACTCTCATGAAGCAGTACATTGAGTTCGT 160182 Query 43016 CGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGCCGTGCCC 43072 || |||| ||||| || ||| | || | || | | ||||| | | ||| Sbjct 160181 TGCAGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTTTACAAGGCTACCAACCC 160125 Query 43073 CTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGT 43132 |||||||| ||||||||||| || | | |||||||||||||| ||||||||||| || Sbjct 160124 ATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGT 160065 Query 43133 CGCCGACTACCAG 43145 ||| || |||||| Sbjct 160064 CGCTGATTACCAG 160052 Score = 140 bits (154), Expect = 6e-28 Identities = 287/409 (70%), Gaps = 21/409 (5%) Strand=Plus/Plus Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGG 42780 ||| ||||| ||||||||| || ||||||||||||||||||||||||||| || ||| Sbjct 409158 CGTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGG 409217 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 || ||||| || || || ||||| ||||| |||||| | |||||||| || || | Sbjct 409218 CCTC-ATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACA 409276 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCTCG-AAGGAGC 42897 ||||| || || || |||||||| ||| | | |||| |||| | ||| || Sbjct 409277 CCGACTTCGCTTGTCTGCTGTTCTC---TCACTT---GAACAACCGCCCCAGCAAGCAGA 409330 Query 42898 GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGC 42957 |||| | || |||| || || || |||||| |||||||||| || || | | Sbjct 409331 CTGTCCAAGATATTGTCACCGATGCTGTCACTATCGAGCAGGAGTTCCTGACTGAGGCTC 409390 Query 42958 TGCCC-GTGTCCCTGGTCGGCATGAACCACGAC-CTCATGTGCAAGTACATCCAGTACGT 43015 | ||| ||| ||| | |||||||| | | || |||||| ||||||| ||| ||| Sbjct 409391 TTCCCTGTG-GTCTGCTTGGCATGAA-CGCTACTCTCATGAAGCAGTACATTGAGTTCGT 409448 Query 43016 CGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGCCGTGCCC 43072 || |||| ||||| || ||| | || | || | | ||||| | | ||| Sbjct 409449 TGCAGACCGCCTCCTCGTCGCC--CTCGGCAACGAGAAG-GTTTACAAGGCTACCAACCC 409505 Query 43073 CTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTC 43121 |||||||| ||||||||||| || | | |||||||||||||| ||| Sbjct 409506 ATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTCTTC 409554 Score = 122 bits (134), Expect = 2e-22 Identities = 227/327 (69%), Gaps = 11/327 (3%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA 42367 |||||||||||||| | || | || |||||||||||| |||||||| ||| ||||||| Sbjct 160946 ATGTACAAGAAGGCAGAAGCT-TCTTTCTGGACCGCCGAAGAGATTGATCTGTCCAAGGA 160888 Query 42368 CACGGCCGGCTGGGAGT-CACTGTC--TGAGAACGAAAAGTTTTTCCTCAAAAACATACT 42424 || |||| | || || ||| | ||||||| ||| || | |||| || Sbjct 160887 TCTCCACGACTGGAACAACAAGATCAATGACGATGAAAAGTACTTCATCTCACACATCCT 160828 Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484 |||||||| ||||| || || ||||| ||||| |||||||| | | |||| Sbjct 160827 TGCCTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTCGTTGAGCGCTTCAGTGC 160768 Query 42485 AGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544 ||||| ||| ||||| || |||||||||||||||||||| || |||||| | Sbjct 160767 CGAGGTCCAGGTTCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATGATGGAGAACAT 160708 Query 42545 GCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGCG 42601 ||||||||| ||| | ||||||| |||| |||||| ||| || | | || | Sbjct 160707 CCACTCTGAGACTTACTC---GCTGCTCATTGACACCTACATCAAGGAGCCTGCCCAGAG 160651 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGAC 42628 | | || ||||| ||||| || || Sbjct 160650 GACCTATCTCTTCAATGCCATCGATAC 160624 Score = 114 bits (126), Expect = 2e-20 Identities = 223/326 (68%), Gaps = 9/326 (3%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||||| || ||| |||||||||||| |||||||| || | ||||| Sbjct 408685 ATGTACAAGAAGGCAGAGGCTTCCTTCTGGACCGCCGAAGAGATTGATCTATCTAAGGAT 408744 Query 42369 ACGGCCGGCTGGGAGT-CACTGTC--TGAGAACGAAAAGTTTTTCCTCAAAAACATACTG 42425 || |||| | || || ||| | ||||||| ||| || | |||| || Sbjct 408745 CTCCACGACTGGAACAACAAGATCAATGATGATGAAAAGTACTTCATCTCACACATCCTT 408804 Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485 |||||||| ||||| || || ||||| ||||| |||||||| | | |||| Sbjct 408805 GCCTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTCGTTGAGCGCTTCAGTGCC 408864 Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545 ||||| ||| |||||| || |||||||||||||||||||| || |||||| | Sbjct 408865 GAGGTCCAGGTTCCTGAGGCTCGATGCTTCTACGGCTTCCAGATTATGATGGAGAACATC 408924 Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGCGT 42602 ||||| ||| ||| | ||||||| |||| |||||| || || | | || | Sbjct 408925 CACTCCGAGACTTACTC---GCTGCTCATTGACACCTACATCAAAGAGCCTGCCCAGAGG 408981 Query 42603 AACGGGCTGTTCAAGGCCATGGAGAC 42628 | | || ||||| ||||| || || Sbjct 408982 ACCTATCTCTTCAATGCCATCGATAC 409007 >seq11514 Length=5315 Score = 156 bits (172), Expect = 8e-33 Identities = 241/343 (70%), Gaps = 11/343 (3%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | ||||| ||||||||||||| |||| || || Sbjct 18 GTTGACGACCTGGAACTCGCCGGCGAGCACACGGCGCTGGTAGATGTTGGACGTGTAAGG 77 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| ||||||| || ||||||| || || || || |||||||||| ||| Sbjct 78 CTCGAAGCACTCGTTGTTGCCAAGGATCTGCGAGGTACTGGCCGTGGGCATGGGCGCCAC 137 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 || |||||||| | ||||| || || ||| || |||| ||| |||||||| Sbjct 138 GAGAAGACTGTTACGGACGCCATGTTGCTTGATCTGGCTCTTGAGGTCGGCCCAGTCCC- 196 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 | ||||| | |||| | ||||||||| | || || | |||| | Sbjct 197 --------AAAGGTCAGTAGGCTTGACGTTCCACATGTCGTATTGAAGGATACCCTGGGA 248 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACA-GCTCT 244388 |||||| |||||| ||||| | |||||| || || ||| || ||||| || | | Sbjct 249 GACGGGCGAGCCCTCATAGGTGGAGTAGGGGCCTTCCTCCTGAGCGAGCTTGCATGACAT 308 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTT 244431 ||| ||||| |||| |||||||||||| |||||| |||||| Sbjct 309 GGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTT 350 >seq28027 Length=10271 Score = 111 bits (122), Expect = 3e-19 Identities = 113/145 (78%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGG 42780 ||| ||||| ||||||||| || ||||||||||||||||||||||||||| || ||| Sbjct 5241 CGTTGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGG 5182 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 || ||||| || || || ||||| ||||| |||||| | |||||||| || || | Sbjct 5181 CCTC-ATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACA 5123 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTC 42865 ||||| || || || |||||||| Sbjct 5122 CCGACTTCGCTTGTCTGCTGTTCTC 5098 >seq17 Length=218 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 ||| |||||||| ||||||||||| || | | |||||||||||||| ||||||||||| Sbjct 123 CCCATTCGACTTCATGGAGAACATTTCTCTTGGCGGCAAGACCAACTTCTTCGAGAAGCG 64 Query 43130 CGTCGCCGACTACCAG 43145 ||||| || |||||| Sbjct 63 TGTCGCTGATTACCAG 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944007725136560