Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08- 07] 28,081 sequences; 99,189,222 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq23861 104 2e-17 >seq23861 Length=270256 Score = 104 bits (114), Expect = 2e-17 Identities = 198/292 (68%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 || ||||||||| |||| ||| |||||||| ||||||||| | || || ||||||| Sbjct 163357 ACGTAAAATTGAGCAAACATGTGGCAGGGCGGCAGCGCCATCTTCTTCAGGTGCGCCGGG 163416 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| || | | ||||| | | ||||| |||||| | || | | ||||| Sbjct 163417 TTCCATGCGCTGAGGATGATGCGCCGATCGTACGGATTGGTCTTGAGCTTGTGGACAATC 163476 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCC 20536 | | || ||||| | || || || || ||||| | | ||| || |||||| | || Sbjct 163477 TCTGCCAGCTGGTCGACACCTTGACCCGTGTAGTCCGTCTTCGCATCAACGTACTCGGCA 163536 Query 20537 CCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCC 20596 || ||||||| ||| ||||| ||||| || || || | || || | | ||| | Sbjct 163537 CCGAAGTGCCGCCATTGGAAGCCGTAGACGGGACCGAGGTCGCCTACTTCGCGGTGTGAG 163596 Query 20597 AGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648 || || | | | |||||||| | ||||| || |||||| ||||||| Sbjct 163597 AGTCCCACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGA 163648 Score = 89.7 bits (98), Expect = 5e-13 Identities = 195/292 (67%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 || ||||| ||| |||| ||| |||||||| ||||||||| | || || ||||||| Sbjct 129636 ACGTAAAACTGAGCAAACATGTGGCAGGGCGGCAGCGCCATCTTCTTCAGGTGCGCCGGG 129695 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| || | | ||||| | | ||||| |||||| | || | | ||||| Sbjct 129696 TTCCATGCGCTGAGGATGATGCGCCGATCGTACGGATTGGTCTTGAGCTTGTGGACAATC 129755 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCC 20536 | | || ||||| | || || || || ||||| | ||| || || ||| | || Sbjct 129756 TCTGCCAGCTGGTCGACACCTTGTCCCGTGTAGTCCGTCGTCGCATCAACATACTCAGCA 129815 Query 20537 CCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCC 20596 || ||||||| ||| ||||| ||||| || || || | || || | | ||| | Sbjct 129816 CCGAAGTGCCGCCATTGGAAGCCGTAGACGGGACCGAGGTCGCCTACTTCGCGGTGTGAG 129875 Query 20597 AGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648 || || | | | |||||||| | ||||| || |||||| ||||||| Sbjct 129876 AGTCCCACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGA 129927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441217872630040