Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08-
07] 28,081 sequences; 99,189,222 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq23972 93.3 3e-14
>seq23972
Length=267833
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| ||||| || || || || || ||||| || | | || | | | || ||
Sbjct 225503 ACCAAATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCCTCA 225444
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || || || |||| |||||||||||||| |||||||| || || |||||
Sbjct 225443 AGCTGCTTGCCAGCGAAAATCAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCTTGG 225384
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || ||| | || | ||||| || | ||| ||||| | |||| || ||
Sbjct 225383 ATCTTGGACTTCACATTGTCGATCGTGTCGGATGATTCGACTTCCAATGTGATAGTCTTA 225324
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| | || || || || || |||||
Sbjct 225323 CCGGTGAGCGTCTTGACGAAGATTTGCAT 225295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396142778794917
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |