Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08- 07] 28,081 sequences; 99,189,222 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq24749 417 2e-111 seq11514 232 1e-55 seq27938 168 1e-36 seq18890 118 2e-21 seq28027 100 5e-16 >seq24749 Length=740841 Score = 417 bits (462), Expect = 2e-111 Identities = 1147/1730 (66%), Gaps = 68/1730 (4%) Strand=Plus/Minus Query 212572 CAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCCCAGC 212628 |||||||||||| |||||| || ||||||||||||||||| ||||| ||| ||||| Sbjct 417419 CAGCAGCAGCCTGGGTGCGCAGGTAGTACATGCCGGTCTTGAGGCCAAGCTT---CCAGC 417363 Query 212629 CGTGCATGTGCATTGCT-GTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCC 212687 || | |||||| ||| |||| |||| | | || |||| | || || Sbjct 417362 CGGCGAAGTGCAT-GCTCGTGA---TCTTGCCCATGGTAG---GGTCCT--TCATG---- 417316 Query 212688 AGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCT 212747 || | ||||| |||||| |||||| ||||| | | | || || ||||| | Sbjct 417315 ---TGAATGTTCAAGGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGC 417259 Query 212748 ATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGG 212807 | | | ||| || | |||||| || |||||| | | |||| ||| | || Sbjct 417258 ACAACGGTGCGCTGAGAAATCTCCCAGACAGTCTTGTACAGGGACTTGACGTCGGCGGGA 417199 Query 212808 AAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCC 212864 | | |||||||||||| | || || | | ||| | | | | |||| Sbjct 417198 ATGTTGGGGATGTTCTGGATGGAACCATTCTCGGCAATGATGCGATTCTT---CATGCTA 417142 Query 212865 TCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAG 212924 || ||| || ||| || | || ||||| ||| |||||||| | |||||| Sbjct 417141 TCAGACCAAAGACCCATGTCAACAAGATCCTTGAGCAGCCAGGGGTTGACGACCTGGAAC 417082 Query 212925 TCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTG 212984 || || | |||||| | | |||||| | ||| || ||||| ||||||| || ||||||| Sbjct 417081 TCGCCGGCGAGCACACGGCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTG 417022 Query 212985 TTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTC 213044 || || || ||||| | || ||||| ||||||||||| ||||| || |||||||| | Sbjct 417021 TTGCCAAGGATCTGCGAGGTACTGGCCGTGGGCATGGGCGCCACGAGAAGACTGTTACGG 416962 Query 213045 ACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCC 213104 || || || | ||| ||| | || || ||||||||||| | ||| ||| Sbjct 416961 ACGCCATGTTGCTTGATCTGGCTCTTGAGGTCGGCCCAGTCCCAAAGGTCAGT-AGG--- 416906 Query 213105 TCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGG 213164 ||| |||||||||||||| | || | ||| || | | ||||| ||||| Sbjct 416905 -----CTTGACGTTCCACATGTCGTATTGAAGGATACCCTGGGAGACGGGCGAGCCCTCA 416851 Query 213165 TAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAG 213224 || | |||||||||||| | ||||| || |||| ||| ||| ||||||||||| | Sbjct 416850 TAGGTGGAGTAGGGGCCTTCCTCCTGAGCGAGCTTGCATGACATGGTCAGGGCAGCGTGG 416791 Query 213225 TAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATC 213284 |||||||| ||||| |||| | ||||||||| ||||||||| || ||| |||||||| Sbjct 416790 TAGATGGTCTCAAAGATCTGCTTGTTGAGCTCCTTGGCCTCAGGCGACTCAAAGGGCATG 416731 Query 213285 ATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTC 213344 | |||| ||||||||| |||||||| || | ||| ||||| | || | | Sbjct 416730 CGGAGAGCAAGGAAAGCATCAGCCAAGCCCTGGACACCAAGGCCAATGGGCCGATGGCGC 416671 Query 213345 AGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAG 213403 | ||| ||| |||| ||| | ||||||| ||| |||||||||| ||||||| Sbjct 416670 ATGTTGCTGTTGCGAGC-CTCGATGACGGGGTAATGGTTCACGTCGATGATCCTGTTGAG 416612 Query 213404 GTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCC 213463 ||| | | | | || | ||||| ||| || | || | | ||||| | Sbjct 416611 GTTCCTGACGACGACCTGAGTGACCTGGTGGAGCTTCTTGAAGTCATACACGCCGTTGTT 416552 Query 213464 GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGA 213523 || | || | | |||||||| | |||||||||||| ||||| ||||| | | Sbjct 416551 GTAATCAACGTAGGCGGGCAGGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCATCGGG 416492 Query 213524 GTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTG 213583 | | |||||| | ||||| |||||||||||| || || ||||| || ||||||| Sbjct 416491 TGCCGAGTACTCGACAATCTCTGTGCACAGGTTGGAGCTGCGAATGGTACCAAGGTTCTT 416432 Query 213584 GTGGTTTGACTTTGCGTTGGCAG-AATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTA 213642 ||| ||| ||||| | |||| |||||||||||||||| ||||| |||||||| Sbjct 416431 CTGG-TTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGG 416373 Query 213643 GCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTC 213702 ||| | | | || | | ||| || | | ||||||| | || | || | Sbjct 416372 TCTGAGCCTCGAGGACGGCGTACCAAAGCTTCTGCGCCTTGA----TGGTCTTGCGGC-C 416318 Query 213703 CGGGCGTAGC---CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAG-ACCCTG 213758 | || ||| |||||||| ||||| | | | || |||| || || | | | Sbjct 416317 CTTGC-CAGCCTTCTCGTACTTCTCGTACAAGGCCTCAAACTCGTCACCGTAGCAGTCAG 416259 Query 213759 TCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACTCT 213817 | || || || || ||| |||||||| ||||||| ||| || |||| ||| | Sbjct 416258 -CAAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTC-GACACG 416201 Query 213818 CTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTC 213877 || |||||| || || |||| |||||| || ||| || || | | | || || Sbjct 416200 CTTCATGAAGAGATCGGGGATCCACAGGGCCAGGAAAAGATCGCGAGCGCGAACTTCCTC 416141 Query 213878 CACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCAT 213937 | || ||| ||||| || || || || || |||| || |||||||| ||||| | Sbjct 416140 CTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAG 416081 Query 213938 GTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCAT 213994 |||||||||||| ||||| | || | |||||||||||||| || | ||| | Sbjct 416080 GTAGATGGCAAAAGCGCCGGGACGCTTGTTGCCGCCCTGGTCAACGTAGCGCGCCGTGTT 416021 Query 213995 GTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATA 214054 |||||||| ||| || | ||| | ||||| || |||||||| || || || || Sbjct 416020 GTTGAAGACGCGAAGCATGGGCGTGATGCCGTTTGAAGTGCCGTTGGTGCCGGCAATGTA 415961 Query 214055 CGAGCCGGAGGCCCTCAGGTTGCTCATGGA----GAGCCCTATGCCACCGGCGTACTTGG 214110 ||||| | ||| | || ||| ||||| || || || ||||| || ||||| Sbjct 415960 AGAGCCAGTGGCAC---GGATGC-GATGGACGTTCAGACCAATACCACCAGCCATCTTGG 415905 Query 214111 AGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGT 214170 |||||||||| ||| | | | || || ||| || | ||||||||||| | | || Sbjct 415904 AGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCTTCAATGCTGTCATCCTTCATGT 415845 Query 214171 TCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTGGGG 214229 | || ||||||| ||| |||| | ||||| | || ||||| |||||| || || || Sbjct 415844 CAACCAGGAAGCAGGACGACAGCT-GAGCCTGAGGCGTGCCAGCGTTGAAGAGGGTAGGA 415786 Query 214230 CTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGAC 214279 || || | | || ||| | || | ||| |||| ||||| | ||| Sbjct 415785 GATGCGTGTGTGAAGAATTTGCTGGACATGAGGTTGTACGTCTCAATGAC 415736 Score = 264 bits (292), Expect = 2e-65 Identities = 569/841 (68%), Gaps = 40/841 (5%) Strand=Plus/Plus Query 212574 GCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCCCAGCCG 212630 |||||||||| |||||| || ||||||||||||||||| ||||| ||| ||||||| Sbjct 446587 GCAGCAGCCTGGGTGCGCAGGTAGTACATGCCGGTCTTGAGGCCAAGCTT---CCAGCCG 446643 Query 212631 TGCATGTGCATTGCT-GTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAG 212689 | |||||| ||| |||| |||| | | || |||| | || || Sbjct 446644 GCGAAGTGCAT-GCTCGTGA---TCTTGCCCATGGTAG---GGTCCT--TCATG------ 446688 Query 212690 ATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTAT 212749 || | ||||| ||||||| |||||| ||||| | | | || || ||||| | | Sbjct 446689 -TGAATGTTCAAGGACTGAGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGAAC 446747 Query 212750 GATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAA 212809 || | ||| || | |||||| || |||||| | | |||| ||| | || | Sbjct 446748 GACGGTGCGCTGAGAAATCTCCCAGACAGTCTTGTACAGGGACTTGATGTCGGCGGGAAT 446807 Query 212810 GCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCCTC 212866 | ||| |||||||| | || || | | | ||| | | | | |||| || Sbjct 446808 GTTGGGAATGTTCTGGATGGAACCATTTTCTGCAATGATGCGGTTCTT---CATGCTATC 446864 Query 212867 GTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTC 212926 ||| || ||| || | ||| ||||| ||| |||||||| | |||||| || Sbjct 446865 AGACCAAAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTC 446924 Query 212927 ACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTT 212986 || | |||||| | | |||||| | ||| || ||||| ||||||| || ||||||||| Sbjct 446925 GCCGGCGAGCACACGGCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGTT 446984 Query 212987 CCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCAC 213046 || || ||||| | || ||||| ||||||||||| ||||| || |||||||| | || Sbjct 446985 GCCAAGGATCTGCGAGGTACTGGCCGTGGGCATGGGCGCCACGAGAAGACTGTTACGGAC 447044 Query 213047 TCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTC 213106 || || | ||| ||| | || || ||||||||||| | ||| ||| Sbjct 447045 GCCATGTTGCTTGATCTGGCTCTTGAGGTCGGCCCAGTCCCAAAGGTCAGT-AGG----- 447098 Query 213107 GTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTA 213166 ||| |||||||||||||| | || | ||| || | | ||||| ||||| || Sbjct 447099 ---CTTGACGTTCCACATGTCGTATTGAAGGATACCCTGGGAGACGGGCGAGCCCTCATA 447155 Query 213167 AGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTA 213226 | |||||||||||| | ||||| || |||| ||| ||| ||||||||||| ||| Sbjct 447156 GGTGGAGTAGGGGCCTTCCTCCTGAGCGAGCTTGCATGACATGGTCAGGGCAGCGTGGTA 447215 Query 213227 GATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCAT 213286 |||||| ||||| |||| | ||||||||| ||||||||| || ||| |||||||| Sbjct 447216 GATGGTCTCAAAGATCTGCTTGTTGAGCTCCTTGGCCTCAGGCGACTCAAAGGGCATGCG 447275 Query 213287 CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAG 213346 | |||| ||||||||| |||||||| || | ||| ||||| | || | || Sbjct 447276 GAGAGCAAGGAAAGCATCAGCCAAGCCCTGGACACCAAGGCCAATGGGCCGATGGCGCAT 447335 Query 213347 GTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGT 213405 ||| ||| |||| ||| | |||||| ||| |||||||||| ||||||||| Sbjct 447336 GTTGCTGTTGCGAGC-CTCGATGACGGGGTAGTGGTTCACGTCGATGATCCTGTTGAGGT 447394 Query 213406 T 213406 | Sbjct 447395 T 447395 >seq11514 Length=5315 Score = 232 bits (256), Expect = 1e-55 Identities = 316/441 (72%), Gaps = 9/441 (2%) Strand=Plus/Plus Query 212894 CTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAA 212953 ||||| ||| |||||||| | |||||| || || | |||||| | | |||||| | Sbjct 3 CTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCGGCGAGCACACGGCGCTGGTAGAT 62 Query 212954 GTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGT 213013 ||| || ||||| ||||||| || ||||||||| || || ||||| | || ||||| || Sbjct 63 GTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGCGAGGTACTGGCCGT 122 Query 213014 GGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAG 213073 ||||||||| ||||| || |||||||| | || || || | ||| ||| | || Sbjct 123 GGGCATGGGCGCCACGAGAAGACTGTTACGGACGCCATGTTGCTTGATCTGGCTCTTGAG 182 Query 213074 CTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTG 213133 || ||||||||||| | ||| ||| ||| |||||||||||||| | || Sbjct 183 GTCGGCCCAGTCCCAAAGGTCAGT-AGG--------CTTGACGTTCCACATGTCGTATTG 233 Query 213134 CAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGC 213193 | ||| || | | ||||| ||||| || | |||||||||||| | ||||| || Sbjct 234 AAGGATACCCTGGGAGACGGGCGAGCCCTCATAGGTGGAGTAGGGGCCTTCCTCCTGAGC 293 Query 213194 CAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAG 213253 |||| ||| ||| ||||||||||| ||||||||| ||||| |||| | ||||||| Sbjct 294 GAGCTTGCATGACATGGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAG 353 Query 213254 CTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCC 213313 || ||||||||| || ||| |||||||| | |||| ||||||||| || Sbjct 354 CTCCTTGGCCTCAGGCGACTCAAAGGGCATGCGGAGAGCAAGGAAAGCATCAGCCAAGCC 413 Query 213314 CTGGACCCCGATGCCGATGGG 213334 |||||| || | ||| ||||| Sbjct 414 CTGGACACCAAGGCCAATGGG 434 >seq27938 Length=10276 Score = 168 bits (186), Expect = 1e-36 Identities = 440/658 (67%), Gaps = 26/658 (4%) Strand=Plus/Plus Query 213480 GGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATG 213539 |||||||| | |||||||||||| ||||| ||||| | | | | |||||| | Sbjct 9600 GGCAGGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCATCGGGTGCCGAGTACTCGACA 9659 Query 213540 ATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCG 213599 ||||| |||||||||||| || || ||||| || ||||||| ||||| ||| ||| Sbjct 9660 ATCTCTGTGCACAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTT-GCG 9718 Query 213600 TTGGCAGA-ATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTAT 213658 | |||| |||||||||||||||| ||||| |||||||| ||| | | | || | Sbjct 9719 GTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGAC 9778 Query 213659 CTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCT---C 213715 | ||| || | | ||||||| | || | || | | | ||||| | Sbjct 9779 GGCGTACCAAAGCTTCTGCGCCTTGATG----GTCTTGCGGCCCTTGCC--AGCCTTCTC 9832 Query 213716 GTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGG 213774 ||||| ||||| | | | || |||| || || | | | | || || || || Sbjct 9833 GTACTTCTCGTACAAGGCCTCAAACTCGTCACCGTAGCAGTCAG-CAAGGCCAGGGCACT 9891 Query 213775 ATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCC 213833 ||| |||||||| ||||||| |||| | |||| ||| | || |||||| || || Sbjct 9892 CGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTC-GACACGCTTCATGAAGAGATCG 9950 Query 213834 GGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTG 213893 |||| |||||| || ||| || || | | | || ||| || ||| ||| Sbjct 9951 GGGATCCACAGGGCCAGGAAAAGATCGCGAGCGCGAACTTCCTCCTTGCCGTGGTTCTTG 10010 Query 213894 CGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCG 213953 || || || || || || |||| || |||||||| ||||| | |||||||||||| ||| Sbjct 10011 CGGAGGTCAAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGCG 10070 Query 213954 CCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGG 214010 || | || | |||||||||||||| || | ||| ||||||||| ||| || Sbjct 10071 CCGGGACGCTTGTTGCCGCCCTGGTCAACGTAGCGCGCCGTGTTGTTGAAGACGCGAAGC 10130 Query 214011 ACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTC 214070 | ||| | ||||| || |||||||| || || || || ||||| | ||| | Sbjct 10131 ATGGGCGTGATGCCGTTTGAAGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTGGCAC-- 10188 Query 214071 AGGTTGCTCATGGA----GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAG 214124 || ||| ||||| || || || ||||| || ||||||||||||||| ||| Sbjct 10189 -GGATGC-GATGGACGTTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAG 10244 >seq18890 Length=446397 Score = 118 bits (130), Expect = 2e-21 Identities = 337/510 (66%), Gaps = 21/510 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || | || | ||||| |||||||| ||||| || | | || |||||||| Sbjct 160052 CTGGTAATCAGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAAATGTTCTC 160111 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||| ||||||| | || || ||| | || ||| | | || | Sbjct 160112 CATGAAGTCGAATGGGTTGGTAGCCTTGTAAACCT-TCTCGTTGCCGAGGGCGACGAGGA 160170 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || || ||| |||| ||||| | |||||| || ||||||||| | ||| Sbjct 160171 GGCGGTCTGCAACGAACTCAATGTACTGCTTCATGAGAGTAGCGTTCATGCCGAGCAGGC 160230 Query 48018 ACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| ||| | ||||| || || ||||| | ||| || | || || || ||||| Sbjct 160231 -CACAGGGGAGAGCCTCAGTCAGGAACTCTTGCTCAATATTGACAGCATCGGTGACAATG 160289 Query 48077 TGCTTAACGCGGGAC--TCTGA-----GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCAT 48129 | ||| |||| |||| ||| |||| || ||| | | |||| Sbjct 160290 T-CTT------GGACAGTCTGCTTGCTGGGGCGGTTGTTCAAGTGAGAGA---ACAGCAG 160339 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 || || ||||| |||| | || ||||| || ||||||| |||||||||| || Sbjct 160340 ACAAGCGAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAG 160399 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 |||||||||| || | || ||||||||||| || | ||||| | || |||||| Sbjct 160400 GCCAGGCATGAGGCCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAA 160459 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| ||||| || ||||||| ||| ||| | | || | || ||||| || | Sbjct 160460 GATACCCTCAACGACCGCGAAAGCGACGAGGCGGGTGGCAAAGGTAGACTTCTTATCGGT 160519 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 |||||| | | |||||||| |||||||| Sbjct 160520 GATCCATGTCAAGGCCCAGTCAGCCTTCTT 160549 Score = 105 bits (116), Expect = 1e-17 Identities = 319/485 (66%), Gaps = 21/485 (4%) Strand=Plus/Minus Query 47864 AAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGGTGTG 47923 |||||||| ||||| || | | || ||||||||||||||| ||| ||||||| | Sbjct 409553 AAGAAGTTGGTCTTGCCGCCAAGAGAAATGTTCTCCATGAAGTCGAATGGGTTGGTAGCC 409494 Query 47924 TTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCGATGTA 47982 || || ||| | || ||| | | || ||| | || || ||| |||| ||||| Sbjct 409493 TTGTAAACCT-TCTCGTTGCCGAGGGCGACGAGGAGGCGGTCTGCAACGAACTCAATGTA 409435 Query 47983 TTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAA-AGCCTTTGTGAGAA 48041 | |||||| || ||||||||| | || ||| || || ||||| || || | Sbjct 409434 CTGCTTCATGAGAGTAGCGTTCATGCCAAGCAGAC-CACAGGGAAGAGCCTCAGTCAGGA 409376 Query 48042 ACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGAC--TCTGA--- 48096 |||||| ||| || || || || ||||| | ||| |||| |||| Sbjct 409375 ACTCCTGCTCGATAGTGACAGCATCGGTGACAATAT-CTT------GGACAGTCTGCTTG 409323 Query 48097 --GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCT 48154 ||| |||| || ||| | | |||| || || ||||| |||| | || Sbjct 409322 CTGGGGCGGTTGTTCAAGTGAGAGA---ACAGCAGACAAGCGAAGTCGGTGTGAAGACCC 409266 Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| || ||||||| |||||||||| || |||||||||| || | || ||| Sbjct 409265 TCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGGCCAGGCATGAGGCCTCGCTTCTTG 409206 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 |||||||| || | ||||| | || ||||||||| ||||| || ||||||| ||| Sbjct 409205 AGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCAACGACCGCGAAAGCG 409146 Query 48275 GTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCC 48334 ||| | | || | || ||||| || | |||||| | | |||||||| ||| Sbjct 409145 ACGAGGCGGGTGGCAAAGGTAGACTTCTTATCGGTGATCCATGTCAAGGCCCAGTCAGCC 409086 Query 48335 TTCTT 48339 ||||| Sbjct 409085 TTCTT 409081 Score = 95.1 bits (104), Expect = 2e-14 Identities = 113/153 (74%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 48411 TGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGA 48470 |||||||| | ||| |||||||||| | ||||| || ||||||||| ||||||| Sbjct 160682 TGAGCAGC---GAGTAAGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGA 160738 Query 48471 AGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGA 48530 || | ||||| ||||| || || | ||| | ||| | || ||||| |||| Sbjct 160739 AGCATCGAGCCTCGGGAACCTGGACCTCGGCACTGAAGCGCTCAACGAGGTTCTCGTTGA 160798 Query 48531 CTATCCCATCTGAAGCAGCAAAGAAGGCAAGGA 48563 | || ||||||||||| |||||||||||||||| Sbjct 160799 CGATGCCATCTGAAGCGGCAAAGAAGGCAAGGA 160831 Score = 89.7 bits (98), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 48411 TGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGA 48470 |||||||| | ||| |||| ||||| | ||||| || |||||||| ||||||| Sbjct 408949 TGAGCAGC---GAGTAAGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGA 408893 Query 48471 AGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGA 48530 || | |||||| ||||| || || | ||| | ||| | || ||||| |||| Sbjct 408892 AGCATCGAGCCTCAGGAACCTGGACCTCGGCACTGAAGCGCTCAACGAGGTTCTCGTTGA 408833 Query 48531 CTATCCCATCTGAAGCAGCAAAGAAGGCAAGGA 48563 | || ||||||||||| |||||||||||||||| Sbjct 408832 CGATGCCATCTGAAGCGGCAAAGAAGGCAAGGA 408800 >seq28027 Length=10271 Score = 100 bits (110), Expect = 5e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48125 AGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAG 48184 |||| || || ||||| |||| | || ||||| || ||||||| |||||||||| Sbjct 5104 AGCAGACAAGCGAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAA 5163 Query 48185 CAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAG 48244 || |||||||||| || | || ||||||||||| || | ||||| | || | Sbjct 5164 GTCAGGCCAGGCATGAGGCCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTG 5223 Query 48245 AAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG 48304 |||||||| ||||| || ||||||| ||| ||| | | || | || ||||| Sbjct 5224 AAGAAGATACCCTCAACGACCGCGAAAGCGACGAGGCGGGTGGCAAAGGTAGACTTCTTA 5283 Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 || | |||||| | | |||||||| |||||||| Sbjct 5284 TCGGTGATCCATGTCAAGGCCCAGTCAGCCTTCTT 5318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931205820343040