Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08-
07] 28,081 sequences; 99,189,222 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq4335 181 1e-39
seq5113 149 8e-30
seq1559 149 8e-30
seq24749 147 3e-29
seq4225 143 3e-28
seq21417 140 4e-27
seq21485 134 2e-25
seq1857 132 6e-25
seq27372 123 3e-22
seq27938 105 8e-17
seq18890 105 8e-17
seq11514 104 3e-16
seq25194 93.3 5e-13
seq23638 93.3 5e-13
seq28027 91.5 2e-12
seq25447 87.8 2e-11
seq17 87.8 2e-11
>seq4335
Length=169795
Score = 181 bits (200), Expect = 1e-39
Identities = 278/397 (70%), Gaps = 6/397 (2%)
Strand=Plus/Minus
Query 18092 CCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGT 18151
||| || |||||||| ||||| ||||||| |||| |||| || ||||| ||
Sbjct 53375 CCAGCTACGGCGAGTCCCACGGCAAATCCGTCGGCGTCATCGTCGATGGTGTGCCCCCTG 53316
Query 18152 GCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG 18211
| | | || | |||| ||||||| ||||| ||| | || ||||| || ||||||
Sbjct 53315 GTCTCGCCCTCGACGAGTCCGACATTCAGCCCCAGCTTACACGTCGCCGTCCCGGCCAGT 53256
Query 18212 GCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGA 18271
|| | | || || ||||| ||| || ||||||| ||||||||| ||||| |||
Sbjct 53255 CTGCCATCACAACACCCCGCAATGAGAAGGACCGCGTCACCATCCAGTCCGGCACCGAGT 53196
Query 18272 ACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCG 18331
||| ||| || ||| | || | ||| | | ||| ||||| |||||||| |||
Sbjct 53195 TTGGCTACACCCTGGGCACACCGCTTGGCATGCTCGTGCCCAACGAGGACCAGCGCCCCA 53136
Query 18332 TCGACTATTCCGACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCT 18385
|| || | ||| | | || | ||||| ||||| |||||||||| ||||
Sbjct 53135 AGGATTACGGCAACAAGACGATGGACCGTTTCCCGCGTCCCTCGCACGCCGACTGGACCT 53076
Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGA 18445
|| | ||||||||||||||||||| || || || || ||||| || || || |||||||
Sbjct 53075 ACCTCACCAAGTACGGCATCAAGGCTTCCTCCGGAGGCGGCCGCTCCTCGGCGCGCGAGA 53016
Query 18446 CCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482
|| | ||||||||||||||||| || ||||| ||
Sbjct 53015 CCATTGCCCGCGTCGCCGCCGGCGCCGTTGCCGAAAA 52979
Score = 181 bits (200), Expect = 1e-39
Identities = 278/397 (70%), Gaps = 6/397 (2%)
Strand=Plus/Minus
Query 18092 CCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGT 18151
||| || |||||||| ||||| ||||||| ||| |||| || ||||| ||
Sbjct 58222 CCAGCTACGGCGAGTCCCACGGCAAATCCGTCGGCGTCATTGTCGATGGTGTGCCCCCTG 58163
Query 18152 GCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG 18211
|| | | || | |||| ||||||| ||||| ||| | || ||||| || ||||||
Sbjct 58162 GCCTCGCCCTCGACGAGTCCGACATTCAGCCCCAGCTTACACGTCGCCGGCCCGGCCAGT 58103
Query 18212 GCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGA 18271
|| | | || || ||||| ||| || ||||||| ||||||||| ||||| |||
Sbjct 58102 CTGCCATCACAACACCCCGCAATGAGAAGGACCGCGTCACCATCCAGTCCGGCACCGAGT 58043
Query 18272 ACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCG 18331
||| ||| || ||| | || | ||| | | ||| ||||| |||||||| |||
Sbjct 58042 TTGGCTACACCCTGGGCACACCGCTTGGCATGCTCGTGCCCAACGAGGACCAGCGCCCCA 57983
Query 18332 TCGACTATTCCGACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCT 18385
|| || | ||| | | || | ||||| ||||| |||||||||| ||||
Sbjct 57982 AGGATTACGGCAACAAGACGATGGACCGTTTCCCGCGTCCCTCGCACGCCGACTGGACCT 57923
Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGA 18445
|| | ||||||||||||||||||| || || || || ||||| || || || |||||||
Sbjct 57922 ACCTCACCAAGTACGGCATCAAGGCTTCCTCCGGAGGCGGCCGCTCCTCGGCGCGCGAGA 57863
Query 18446 CCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482
|| | ||||||||||||||||| || ||||| ||
Sbjct 57862 CCATTGCCCGCGTCGCCGCCGGCGCCGTTGCCGAAAA 57826
Score = 123 bits (136), Expect = 3e-22
Identities = 121/152 (80%), Gaps = 3/152 (2%)
Strand=Plus/Minus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGC 19112
||||||||||| || || ||||| ||| ||| || |||||||| ||||| |||
Sbjct 57584 ATCGGCGGCACCGTCACCTGCGTCATCAAGAACCCGCCCGCCGGCCTCGGTGAGCCCTGC 57525
Query 19113 TTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGA 19172
|| |||||| |||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 57524 TTCGACAAGCTCGAGGCCCTGCTCGCCCACGCCATGCTCAGCATCCCGGCCACCAAGGGC 57465
Query 19173 TTCGAGATTGGCAGCGGG-TTTG-CGGGTGCG 19202
|||||||| || | |||| |||| ||| ||||
Sbjct 57464 TTCGAGATCGG-ATCGGGCTTTGCCGGCTGCG 57434
>seq5113
Length=161481
Score = 149 bits (164), Expect = 8e-30
Identities = 318/464 (69%), Gaps = 12/464 (3%)
Strand=Plus/Minus
Query 1726694 GCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCC-ACGCTCCCGTCGGTGCCGTTCTTGAA 1726752
|||||||||| | |||||| | || || |||| | | | ||||||||||||||||||||
Sbjct 55395 GCGGCGGCGCCAATGGCGTCAA-TGGCGACGCCGAGGTTGCCGTCGGTGCCGTTCTTGAA 55337
Query 1726753 GCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCG 1726812
||||| || | || || |||| || | ||||||||| | ||| |||||| |||||
Sbjct 55336 GCCGACGGGGAACGAGAGGCCCGAGGCGAGCTCGCGGTGGAGCTGCGACTCGGTGGTGCG 55277
Query 1726813 CGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA-AATAAGGGGCCACCAGAGGACTGA 1726871
|||||| | |||||| || | | ||| || | | ||||| | | | | ||
Sbjct 55276 CGCGCCAATGGCGCCGACCGAGATAAAGTCGGCGAGGAACTGGGGCGAGATGGTGTC-GA 55218
Query 1726872 GAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGGCGGCGCG 1726931
| | |||| || | |||| || | | | | ||| ||||| || || ||||||
Sbjct 55217 GCATCTCGGACGCAATGGGC--AT-GCCCTTGGCCGTGAGGTCGCGGAAGAGCTGGCGCG 55161
Query 1726932 ACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGC 1726991
|| | |||||| | | | || ||| | ||||| |||||||||| || ||||
Sbjct 55160 ACACGCGCAGGCCCTTGTTGATCTGGAACGTCGAGTCGATGTCGGGGTCGTTGATGAGGC 55101
Query 1726992 CCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACGCAAAGCG 1727051
||||||| || || |||||||| ||||| |||| |||||||||||||| | ||| ||
Sbjct 55100 CCTTCCAGCCCACCGTCGTGCGGGGCTTCTCGAGGTAGGCGCGCATGACGATGCAGAGGT 55041
Query 1727052 CGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGC-GTCGGCCATAGTCGACGACGGCC 1727110
| | | || ||| |||| |||||||| | ||| || || |||| | |
Sbjct 55040 CCTGGTTGAGACGGTCGGCGACA---GCGCGCAGCCTGTC-GCAGTACTCGAGCGCCGTG 54985
Query 1727111 GCCGGGTCGTGCGCCGAACACGGACCAACGATAACCAGCAGCCG 1727154
||||||||||| ||| || || || | ||| ||||| || ||
Sbjct 54984 GCCGGGTCGTGGATCGAGCAGGGGCCGATGATGACCAGGAGGCG 54941
>seq1559
Length=10155
Score = 149 bits (164), Expect = 8e-30
Identities = 318/464 (69%), Gaps = 12/464 (3%)
Strand=Plus/Minus
Query 1726694 GCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCC-ACGCTCCCGTCGGTGCCGTTCTTGAA 1726752
|||||||||| | |||||| | || || |||| | | | ||||||||||||||||||||
Sbjct 5217 GCGGCGGCGCCAATGGCGTCAA-TGGCGACGCCGAGGTTGCCGTCGGTGCCGTTCTTGAA 5159
Query 1726753 GCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCG 1726812
||||| || | || || |||| || | ||||||||| | ||| |||||| |||||
Sbjct 5158 GCCGACGGGGAACGAGAGGCCCGAGGCGAGCTCGCGGTGGAGCTGCGACTCGGTGGTGCG 5099
Query 1726813 CGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA-AATAAGGGGCCACCAGAGGACTGA 1726871
|||||| | |||||| || | | ||| || | | ||||| | | | | ||
Sbjct 5098 CGCGCCAATGGCGCCGACCGAGATAAAGTCGGCGAGGAACTGGGGCGAGATGGTGTC-GA 5040
Query 1726872 GAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGGCGGCGCG 1726931
| | |||| || | |||| || | | | | ||| ||||| || || ||||||
Sbjct 5039 GCATCTCGGACGCAATGGGC--AT-GCCCTTGGCCGTGAGGTCGCGGAAGAGCTGGCGCG 4983
Query 1726932 ACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGC 1726991
|| | |||||| | | | || ||| | ||||| |||||||||| || ||||
Sbjct 4982 ACACGCGCAGGCCCTTGTTGATCTGGAACGTCGAGTCGATGTCGGGGTCGTTGATGAGGC 4923
Query 1726992 CCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACGCAAAGCG 1727051
||||||| || || |||||||| ||||| |||| |||||||||||||| | ||| ||
Sbjct 4922 CCTTCCAGCCCACCGTCGTGCGGGGCTTCTCGAGGTAGGCGCGCATGACGATGCAGAGGT 4863
Query 1727052 CGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGC-GTCGGCCATAGTCGACGACGGCC 1727110
| | | || ||| |||| |||||||| | ||| || || |||| | |
Sbjct 4862 CCTGGTTGAGACGGTCGGCGACA---GCGCGCAGCCTGTC-GCAGTACTCGAGCGCCGTG 4807
Query 1727111 GCCGGGTCGTGCGCCGAACACGGACCAACGATAACCAGCAGCCG 1727154
||||||||||| ||| || || || | ||| ||||| || ||
Sbjct 4806 GCCGGGTCGTGGATCGAGCAGGGGCCGATGATGACCAGGAGGCG 4763
>seq24749
Length=740841
Score = 147 bits (162), Expect = 3e-29
Identities = 189/261 (72%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121
|| |||||| |||||||||||||||| ||| |||||||| ||||||||| || ||||||
Sbjct 416047 GCCCTGGTCAACGTAGCGCGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTT 415988
Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181
|| |||||||||||| || | ||| | ||| | ||| || | || || |
Sbjct 415987 TGAAGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTGGCACGGATGCGATGGACGTTCAG 415928
Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241
|| || || || ||| ||||||||| | || || ||||| ||||||||||| ||
Sbjct 415927 ACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACC 415868
Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301
|| || ||| |||||||||| || || ||||| ||||| || | || | |||
Sbjct 415867 TTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCAGGACGACAGCTGAGCCTGAGGCGT 415808
Query 1630302 GCCGGCGTTGAAGAGCGTGGG 1630322
||| ||||||||||| || ||
Sbjct 415807 GCCAGCGTTGAAGAGGGTAGG 415787
Score = 105 bits (116), Expect = 8e-17
Identities = 322/501 (64%), Gaps = 18/501 (4%)
Strand=Plus/Minus
Query 1628109 GGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAAAACTGGAC 1628168
||||||||||| || |||||||| || || || ||| | ||| ||| |||
Sbjct 416536 GGGCAGGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCATCGGGTGCCGAGTACTCGAC 416477
Query 1628169 GATCTCGGTGCACAGGTTGG-CCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCA 1628227
||||| ||||||||||||| | || | ||||| ||||||| ||||||| | |
Sbjct 416476 AATCTCTGTGCACAGGTTGGAGCTGCG-AATGGTACCAAGGTTCTTCTGGTTGCTCTTGC 416418
Query 1628228 GGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGA 1628287
||||| | ||||||| ||||||| |||| |||||||||| |||| ||| ||| ||
Sbjct 416417 GGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGA 416358
Query 1628288 TGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCT------NNNNNN 1628341
||| |||| | || |||| | || || | ||||||||
Sbjct 416357 CGGCGTACCAAAGCTTCTGCGC---CTTGATGGT---CTTGCGGCCCTTGCCAGCCTTCT 416304
Query 1628342 NNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCT 1628401
||||| | | |||||||| || ||||| || ||
Sbjct 416303 CGTACTTCTCGTACAAGGCCTCAAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACT 416244
Query 1628402 CGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCAC 1628461
|| || || | ||| | ||||||||| || | | || ||| ||||| ||
Sbjct 416243 CGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGG 416184
Query 1628462 ACGTCCACAGTGC--GTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTT 1628519
||||||| || | |||||| ||||| || || ||||||||||||||||||||
Sbjct 416183 GGATCCACAGGGCCAGGAAAAGA--TCGCGAGCGCGAACTTCCTCCTTGCCGTGGTTCTT 416126
Query 1628520 TTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGC 1628579
|||||| || | |||| | || |||||||| ||||| |||||| |||||| ||
Sbjct 416125 GCGGAGGTCAAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGC 416066
Query 1628580 GCCCTTGCGCTTGCCGCCGCC 1628600
||| |||||| ||||||
Sbjct 416065 GCCGGGACGCTTGTTGCCGCC 416045
Score = 104 bits (114), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 1627320 CTTGACCAGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGAT 1627379
||||| ||| | ||||||| || || ||||| | |||||| |||||| ||||||
Sbjct 417112 CTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCGGCGAGCACACGGCGCTGGTAGAT 417053
Query 1627380 GTTGTTGGTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGT 1627439
|||| ||| |||| | |||| ||||||| ||||||||||| || |||||||
Sbjct 417052 GTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGCGAGGTACTGGCCGT 416993
Query 1627440 GGGCATGAGCGCCACGAGGAGCGAGTTGCGCAGGCCGTGCTG-TCGAACTAGCGCGCGCA 1627498
||||||| |||||||||| || ||| || | ||| || || | || || || | | |
Sbjct 416992 GGGCATGGGCGCCACGAGAAGACTGTTACGGACGCCATGTTGCTTGATCTGGCTCTTG-A 416934
Query 1627499 GCGCGTCCCAGTCCCA 1627514
| || ||||||||||
Sbjct 416933 GGTCGGCCCAGTCCCA 416918
Score = 104 bits (114), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 1627320 CTTGACCAGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGAT 1627379
||||| ||| | ||||||| || || ||||| | |||||| |||||| ||||||
Sbjct 446892 CTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCGGCGAGCACACGGCGCTGGTAGAT 446951
Query 1627380 GTTGTTGGTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGT 1627439
|||| ||| |||| | |||| ||||||| ||||||||||| || |||||||
Sbjct 446952 GTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGCGAGGTACTGGCCGT 447011
Query 1627440 GGGCATGAGCGCCACGAGGAGCGAGTTGCGCAGGCCGTGCTG-TCGAACTAGCGCGCGCA 1627498
||||||| |||||||||| || ||| || | ||| || || | || || || | | |
Sbjct 447012 GGGCATGGGCGCCACGAGAAGACTGTTACGGACGCCATGTTGCTTGATCTGGCTCTTG-A 447070
Query 1627499 GCGCGTCCCAGTCCCA 1627514
| || ||||||||||
Sbjct 447071 GGTCGGCCCAGTCCCA 447086
>seq4225
Length=10034
Score = 143 bits (158), Expect = 3e-28
Identities = 191/266 (72%), Gaps = 6/266 (2%)
Strand=Plus/Plus
Query 18223 ACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACG 18282
|| || ||||| ||| || ||||||| ||||||||| ||||| ||| ||| |||
Sbjct 4814 ACACCCCGCAATGAGAAGGACCGCGTCACCATCCAGTCCGGCACCGAGTTTGGCTACACC 4873
Query 18283 CTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCC 18342
|| ||| | || | ||| | | ||| ||||| |||||||| ||| || || |
Sbjct 4874 CTGGGCACACCGCTTGGCATGCTCGTGCCCAACGAGGACCAGCGCCCCAAGGATTACGGC 4933
Query 18343 GACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAG 18396
||| | | || | ||||| ||||| |||||||||| |||||| | |||||
Sbjct 4934 AACAAGACGATGGACCGTTTCCCGCGTCCCTCGCACGCCGACTGGACCTACCTCACCAAG 4993
Query 18397 TACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGC 18456
|||||||||||||| || || || || ||||| || || || ||||||||| | |||
Sbjct 4994 TACGGCATCAAGGCTTCCTCCGGAGGCGGCCGCTCCTCGGCGCGCGAGACCATTGCCCGC 5053
Query 18457 GTCGCCGCCGGCGCGGTCGCCGAGAA 18482
|||||||||||||| || ||||| ||
Sbjct 5054 GTCGCCGCCGGCGCCGTTGCCGAAAA 5079
>seq21417
Length=821870
Score = 140 bits (154), Expect = 4e-27
Identities = 95/107 (89%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| |||||||||| ||||||||||| || |||||| | || |||||| | || ||||||
Sbjct 447139 GCCTCCAACTACCTTGACATCAAGCCCCTTCTCGATGTCGGCTGCAAGACCGTCGCCAAC 447080
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
|||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 447079 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACGTTCAACAT 447033
>seq21485
Length=32759
Score = 134 bits (148), Expect = 2e-25
Identities = 94/107 (88%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| | |||||||| ||||||||||| || |||||| | || |||||| | || ||||||
Sbjct 7156 GCCTCTAACTACCTTGACATCAAGCCCCTTCTCGATGTCGGCTGCAAGACCGTCGCCAAC 7215
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
|||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 7216 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACGTTCAACAT 7262
>seq1857
Length=192
Score = 132 bits (146), Expect = 6e-25
Identities = 90/101 (89%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 1592192 AACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATC 1592251
|||||||| ||||||||||| || |||||| | || |||||| | || ||||||||||||
Sbjct 1 AACTACCTTGACATCAAGCCCCTTCTCGATGTCGGCTGCAAGACCGTCGCCAACATGATC 60
Query 1592252 AAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
|||||||||||||||||||||||||||||||| || |||||
Sbjct 61 AAGGGCAAGTCGCCCGAGGAGATCCGCAAGACGTTCAACAT 101
>seq27372
Length=10353
Score = 123 bits (136), Expect = 3e-22
Identities = 121/152 (80%), Gaps = 3/152 (2%)
Strand=Plus/Minus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGC 19112
||||||||||| || || ||||| ||| ||| || |||||||| ||||| |||
Sbjct 560 ATCGGCGGCACCGTCACCTGCGTCATCAAGAACCCGCCCGCCGGCCTCGGTGAGCCCTGC 501
Query 19113 TTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGA 19172
|| |||||| |||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 500 TTCGACAAGCTCGAGGCCCTGCTCGCCCACGCCATGCTCAGCATCCCGGCCACCAAGGGC 441
Query 19173 TTCGAGATTGGCAGCGGG-TTTG-CGGGTGCG 19202
|||||||| || | |||| |||| ||| ||||
Sbjct 440 TTCGAGATCGG-ATCGGGCTTTGCCGGCTGCG 410
>seq27938
Length=10276
Score = 105 bits (116), Expect = 8e-17
Identities = 322/501 (64%), Gaps = 18/501 (4%)
Strand=Plus/Plus
Query 1628109 GGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAAAACTGGAC 1628168
||||||||||| || |||||||| || || || ||| | ||| ||| |||
Sbjct 9599 GGGCAGGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCATCGGGTGCCGAGTACTCGAC 9658
Query 1628169 GATCTCGGTGCACAGGTTGG-CCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCA 1628227
||||| ||||||||||||| | || | ||||| ||||||| ||||||| | |
Sbjct 9659 AATCTCTGTGCACAGGTTGGAGCTGCG-AATGGTACCAAGGTTCTTCTGGTTGCTCTTGC 9717
Query 1628228 GGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGA 1628287
||||| | ||||||| ||||||| |||| |||||||||| |||| ||| ||| ||
Sbjct 9718 GGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGA 9777
Query 1628288 TGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCT------NNNNNN 1628341
||| |||| | || |||| | || || | ||||||||
Sbjct 9778 CGGCGTACCAAAGCTTCTGCGC---CTTGATGGT---CTTGCGGCCCTTGCCAGCCTTCT 9831
Query 1628342 NNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCT 1628401
||||| | | |||||||| || ||||| || ||
Sbjct 9832 CGTACTTCTCGTACAAGGCCTCAAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACT 9891
Query 1628402 CGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCAC 1628461
|| || || | ||| | ||||||||| || | | || ||| ||||| ||
Sbjct 9892 CGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGG 9951
Query 1628462 ACGTCCACAGTGC--GTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTT 1628519
||||||| || | |||||| ||||| || || ||||||||||||||||||||
Sbjct 9952 GGATCCACAGGGCCAGGAAAAGA--TCGCGAGCGCGAACTTCCTCCTTGCCGTGGTTCTT 10009
Query 1628520 TTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGC 1628579
|||||| || | |||| | || |||||||| ||||| |||||| |||||| ||
Sbjct 10010 GCGGAGGTCAAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGC 10069
Query 1628580 GCCCTTGCGCTTGCCGCCGCC 1628600
||| |||||| ||||||
Sbjct 10070 GCCGGGACGCTTGTTGCCGCC 10090
Score = 105 bits (116), Expect = 8e-17
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121
|| |||||| |||||||||||||||| ||| |||||||| ||||||||| || ||||||
Sbjct 10088 GCCCTGGTCAACGTAGCGCGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTT 10147
Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181
|| |||||||||||| || | ||| | ||| | ||| || | || || |
Sbjct 10148 TGAAGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTGGCACGGATGCGATGGACGTTCAG 10207
Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241
|| || || || ||| ||||||||| | || || ||||| ||||||||||| ||
Sbjct 10208 ACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACC 10267
Query 1630242 CTCGAT 1630247
|| ||
Sbjct 10268 TTCAAT 10273
>seq18890
Length=446397
Score = 105 bits (116), Expect = 8e-17
Identities = 166/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || | || ||| |||||| |||||||||||||| | || || ||
Sbjct 160047 GCCTTCTGGTAATCAGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAAATG 160106
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | |||||| ||| ||| ||||| | ||
Sbjct 160107 TTCTCCATGAAGTCGAATGGGTTGGTAGCCTTGTAAACCTTCTCGTTGCCGAGGGCGACG 160166
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| |||||||| || || ||||| |||||||| |||||| |||||||||||||
Sbjct 160167 AGGAGGCGGTCTGCAACGAACTCAATGTACTGCTTCATGAGAGTAGCGTTCATGCCGAGC 160226
Query 868871 AGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924
|| ||||| || || | ||| ||| ||||||| ||| || | ||| || |||
Sbjct 160227 AG-GCCACAGGGGAGAGCCTCAGTCAGGAACTCTTGCTCAATATTGACAGCATCG 160280
Score = 91.5 bits (100), Expect = 2e-12
Identities = 137/193 (71%), Gaps = 5/193 (3%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||| | |||||| || | ||||| ||||||||||| |||||
Sbjct 160361 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGGCCAGGCATGAGGCCTCGCTT 160420
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| ||||||| | ||| || ||| ||||| ||||| ||| | || ||
Sbjct 160421 CTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCAACGACCGCGAA 160480
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGC-CCTCCTTGTTGATCCACTTCATCGCCC 869357
||| ||| || ||||||||| || | || | | ||||||| ||| ||||
Sbjct 160481 AGCGACGAGGCGGGTGGCAAAGGT----AGACTTCTTATCGGTGATCCATGTCAAGGCCC 160536
Query 869358 AGTCGGCCTTTTT 869370
|||| ||||| ||
Sbjct 160537 AGTCAGCCTTCTT 160549
Score = 91.5 bits (100), Expect = 2e-12
Identities = 137/193 (71%), Gaps = 5/193 (3%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||| | |||||| || | ||||| ||||||||||| |||||
Sbjct 409269 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGGCCAGGCATGAGGCCTCGCTT 409210
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| ||||||| | ||| || ||| ||||| ||||| ||| | || ||
Sbjct 409209 CTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCAACGACCGCGAA 409150
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGC-CCTCCTTGTTGATCCACTTCATCGCCC 869357
||| ||| || ||||||||| || | || | | ||||||| ||| ||||
Sbjct 409149 AGCGACGAGGCGGGTGGCAAAGGT----AGACTTCTTATCGGTGATCCATGTCAAGGCCC 409094
Query 869358 AGTCGGCCTTTTT 869370
|||| ||||| ||
Sbjct 409093 AGTCAGCCTTCTT 409081
Score = 86.0 bits (94), Expect = 8e-11
Identities = 144/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 868720 GAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGT 868779
||| |||||||||||||| | || || || |||||| | ||| ||||||| |
Sbjct 409554 GAAGAAGTTGGTCTTGCCGCCAAGAGAAATGTTCTCCATGAAGTCGAATGGGTTGGTAGC 409495
Query 868780 CTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTA 868839
|||||| ||| ||| ||||| | |||| |||||||| || || ||||| |||||
Sbjct 409494 CTTGTAAACCTTCTCGTTGCCGAGGGCGACGAGGAGGCGGTCTGCAACGAACTCAATGTA 409435
Query 868840 CTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC-CGGCAGCGACTCGCTCACAA 868898
||| |||||| ||||||||||| | || |||| || || | ||| ||| |
Sbjct 409434 CTGCTTCATGAGAGTAGCGTTCATGCCAAGCAG-ACCACAGGGAAGAGCCTCAGTCAGGA 409376
Query 868899 ACTCTTTCTCGATCTCGACGGCCTCG 868924
|||| | |||||| ||| || |||
Sbjct 409375 ACTCCTGCTCGATAGTGACAGCATCG 409350
>seq11514
Length=5315
Score = 104 bits (114), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 1627320 CTTGACCAGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGAT 1627379
||||| ||| | ||||||| || || ||||| | |||||| |||||| ||||||
Sbjct 3 CTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCGGCGAGCACACGGCGCTGGTAGAT 62
Query 1627380 GTTGTTGGTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGT 1627439
|||| ||| |||| | |||| ||||||| ||||||||||| || |||||||
Sbjct 63 GTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGCGAGGTACTGGCCGT 122
Query 1627440 GGGCATGAGCGCCACGAGGAGCGAGTTGCGCAGGCCGTGCTG-TCGAACTAGCGCGCGCA 1627498
||||||| |||||||||| || ||| || | ||| || || | || || || | | |
Sbjct 123 GGGCATGGGCGCCACGAGAAGACTGTTACGGACGCCATGTTGCTTGATCTGGCTCTTG-A 181
Query 1627499 GCGCGTCCCAGTCCCA 1627514
| || ||||||||||
Sbjct 182 GGTCGGCCCAGTCCCA 197
>seq25194
Length=241957
Score = 93.3 bits (102), Expect = 5e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 344182 GTGGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGACGAGGCC 344241
|| ||||||||||| |||||||| ||||||||||||||||||||||| || |||
Sbjct 31016 GTCGCCTTCCCCACGGAGACCGTGTACGGCCTCGGCGCCGACGCCACCCGCTCCGCCGCC 30957
Query 344242 GTGCGGCGCATCTTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCACGT 344300
|| | |||||| | | ||||||||| |||||| ||||||| |||| | |||||
Sbjct 30956 GTCAAGAGCATCTACGCCGCCAAGGGCCGGCCCTCCGACAACCCCCTCATCATCCACGT 30898
Score = 93.3 bits (102), Expect = 5e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 344182 GTGGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGACGAGGCC 344241
|| ||||||||||| || ||||||||||||||||||||||||||||| || |||
Sbjct 45528 GTCGCCTTCCCCACGGAAACCGTCTACGGCCTCGGCGCCGACGCCACCCGCTCCGCCGCC 45469
Query 344242 GTGCGGCGCATCTTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCACGT 344300
|| | |||||| | | ||||||||| |||||| ||||||| |||| | |||||
Sbjct 45468 GTCAAGGGCATCTACGCCGCCAAGGGCCGGCCCTCCGACAACCCCCTCATCATCCACGT 45410
>seq23638
Length=766119
Score = 93.3 bits (102), Expect = 5e-13
Identities = 114/151 (75%), Gaps = 10/151 (7%)
Strand=Plus/Plus
Query 96654 GCCGAGAACCTCATGATCGTCGACCTGGTGCGCAACGACCTG-AGCGTGTGCTGCGCGCC 96712
|||||||||||||||||||||||||| ||||| |||||||| | | ||| |||| |||
Sbjct 343673 GCCGAGAACCTCATGATCGTCGACCTCGTGCGTCACGACCTGCACGGCGTG-TGCGGGCC 343731
Query 96713 CGGCAGCGTCGTCGTGCCGCCCGGCCGCCTGATG-GCGATTGAGACCTACGCCGCCGTGC 96771
|||| |||||| ||||||| | ||| ||| ||| | ||| |||||| | ||
Sbjct 343732 CGGCCGCGTCGCCGTGCCG------CACCTCATGCGCG-TCGAGGAGTACGCCTCTGTCT 343784
Query 96772 ACCAGATGGTGACCACCGTCGACGGCCTGCT 96802
|||||| | ||| |||||||| || |||
Sbjct 343785 TTCAGATGATCACCGTCGTCGACGCCCGGCT 343815
>seq28027
Length=10271
Score = 91.5 bits (100), Expect = 2e-12
Identities = 137/193 (71%), Gaps = 5/193 (3%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||| | |||||| || | ||||| ||||||||||| |||||
Sbjct 5130 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTCAGGCCAGGCATGAGGCCTCGCTT 5189
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| ||||||| | ||| || ||| ||||| ||||| ||| | || ||
Sbjct 5190 CTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCAACGACCGCGAA 5249
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGC-CCTCCTTGTTGATCCACTTCATCGCCC 869357
||| ||| || ||||||||| || | || | | ||||||| ||| ||||
Sbjct 5250 AGCGACGAGGCGGGTGGCAAAGGT----AGACTTCTTATCGGTGATCCATGTCAAGGCCC 5305
Query 869358 AGTCGGCCTTTTT 869370
|||| ||||| ||
Sbjct 5306 AGTCAGCCTTCTT 5318
>seq25447
Length=269
Score = 87.8 bits (96), Expect = 2e-11
Identities = 69/80 (86%), Gaps = 2/80 (3%)
Strand=Plus/Plus
Query 96654 GCCGAGAACCTCATGATCGTCGACCTGGTGCGCAACGACCTG-AGCGTGTGCTGCGCGCC 96712
|||||||||||||||||||||||||| ||||| |||||||| | | ||| |||| |||
Sbjct 166 GCCGAGAACCTCATGATCGTCGACCTCGTGCGTCACGACCTGCACGGCGTG-TGCGGGCC 224
Query 96713 CGGCAGCGTCGTCGTGCCGC 96732
|||| |||||| ||||||||
Sbjct 225 CGGCCGCGTCGCCGTGCCGC 244
>seq17
Length=218
Score = 87.8 bits (96), Expect = 2e-11
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || | || ||| |||||| |||||||||||||| | || || ||
Sbjct 43 GCCTTCTGGTAATCAGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAAATG 102
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | |||||| ||| ||| ||||| | ||
Sbjct 103 TTCTCCATGAAGTCGAATGGGTTGGTAGCCTTGTAAACCTTCTCGTTGCCGAGGGCGACG 162
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC 868866
|| |||||||| || || ||||| |||||||| |||||| |||||||||||
Sbjct 163 AGGAGGCGGTCTGCAACGAACTCAATGTACTGCTTCATGAGAGTAGCGTTCATGCC 218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6104834741636677
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |