Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08- 07] 28,081 sequences; 99,189,222 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq24749 138 2e-26 seq18890 131 2e-24 seq25172 125 1e-22 seq6780 125 1e-22 seq225 125 1e-22 seq27938 107 3e-17 seq11514 107 3e-17 >seq24749 Length=740841 Score = 138 bits (152), Expect = 2e-26 Identities = 208/293 (71%), Gaps = 2/293 (1%) Strand=Plus/Plus Query 259894 CATGTCGCAGCAG-TTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952 |||||| ||||| || ||||| || | || || ||||| || || |||||||| | Sbjct 415756 CATGTC-CAGCAAATTCTTCACACACGCATCTCCTACCCTCTTCAACGCTGGCACGCCTC 415814 Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012 | ||| ||||| ||||| ||| | |||||||||| || || || || |||| Sbjct 415815 AGGCTCAGCTGTCGTCCTGCTTCCTGGTTGACATGAAGGATGACAGCATTGAAGGTATCT 415874 Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 | ||||| |||||| || || | ||||||||| ||| || || || ||| | || Sbjct 415875 ACGACACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCTGAACG 415934 Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132 || | || ||| | ||| | ||| | || |||||||||||| || |||||| Sbjct 415935 TCCATCGCATCCGTGCCACTGGCTCTTACATTGCCGGCACCAACGGCACTTCAAACGGCA 415994 Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 | ||||||||||||||| || ||| |||||||||||||||| |||||| || Sbjct 415995 TCACGCCCATGCTTCGCGTCTTCAACAACACGGCGCGCTACGTTGACCAGGGC 416047 Score = 120 bits (132), Expect = 4e-21 Identities = 330/505 (65%), Gaps = 12/505 (2%) Strand=Plus/Minus Query 262912 CAGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAG 262971 || |||||| | || ||| | |||||||||| |||||||||||||| || |||||| Sbjct 447053 CAACATGGCGTCCGTAACAGTCTTCTCGTGGCGCCCATGCCCACGGCCAGTACCTCGCAG 446994 Query 262972 ATCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTG 263031 ||||| ||||||| |||| |||||| |||| |||||||||| |||||| ||| Sbjct 446993 ATCCTTGGCAACAACGAGTGCTTCGAGCCTTACACGTCCAACATCTACCAGCGCCGTGTG 446934 Query 263032 CTCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGC 263091 ||| | ||||| || || ||||||| | ||| ||||| | | || | || Sbjct 446933 CTCGCCGGCGAGTTCCAGGTCGTCAACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGT 446874 Query 263092 CTGTGGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTT 263151 || ||| | | | |||| ||||||| | | | || || | ||| | || Sbjct 446873 CTTTGGTCTGATAGCATGAAGAACCGCATCATTGCAGAAAATGGTTCCATCCAGAACATT 446814 Query 263152 GACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCC 263211 | || | || |||| ||||| | || | |||||| || |||||| | | Sbjct 446813 CCCAAC------ATTCCCGCCGACATCAAGTCCCTGTACAAGACTGTCTGGGAGATTTCT 446760 Query 263212 AACCGGGTGACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCG 263271 | || | || | ||||| ||||| || | ||| |||||||| ||||| Sbjct 446759 CAGCGCACCGTCGTTCAGATGGCTGCCGATCGTGGTGCCTTCATCGACCAGTCTCAGTCC 446700 Query 263272 CTCAACCTGTACCTCGCCGACCCGAC---GGCCGAGAGCATCACGTCGATGCACGCCTAT 263328 | ||| | || | ||||| || || | || |||||| |||||| | Sbjct 446699 TTGAACATTCACATGAAGGACCCTACCATGGGCAAG---ATCACGAGCATGCACTTCGCC 446643 Query 263329 GCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAAC 263388 | ||| | ||||||||||| ||||||||||| |||||||||| | | ||||| | Sbjct 446642 GGCTGGAAGCTTGGCCTCAAGACCGGCATGTACTACCTGCGCACCCAGGCTGCTGCGGCC 446583 Query 263389 GCCATTCAATTCACCGTCGATCAGG 263413 | || ||||||||||| ||| ||| Sbjct 446582 CCTATCCAATTCACCGTTGATAAGG 446558 Score = 111 bits (122), Expect = 2e-18 Identities = 333/509 (65%), Gaps = 20/509 (4%) Strand=Plus/Plus Query 262912 CAGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAG 262971 || |||||| | || ||| | |||||||||| |||||||||||||| || |||||| Sbjct 416951 CAACATGGCGTCCGTAACAGTCTTCTCGTGGCGCCCATGCCCACGGCCAGTACCTCGCAG 417010 Query 262972 ATCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTG 263031 ||||| ||||||| |||| |||||| |||| |||||||||| |||||| ||| Sbjct 417011 ATCCTTGGCAACAACGAGTGCTTCGAGCCTTACACGTCCAACATCTACCAGCGCCGTGTG 417070 Query 263032 CTCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAA-GCGCATGGTGGCGCGCGG 263090 ||| | ||||| || || ||||||| | ||| |||| | | || || | | || Sbjct 417071 CTCGCCGGCGAGTTCCAGGTCGTCAACCCCTGGCTGCTCAAGGATCTTGTTGACATG-GG 417129 Query 263091 CCTGTGGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTT 263150 || ||| | | | | || ||||||| | | || || | ||| | | Sbjct 417130 TCTTTGGTCTGATAGCATGAAGAATCGCATCATTGCCGAGAATGGTTCCATCCAGAACAT 417189 Query 263151 TGACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCC 263210 | || | || |||| ||||| | || | |||||| || |||||| | | Sbjct 417190 CCCCAAC------ATTCCCGCCGACGTCAAGTCCCTGTACAAGACTGTCTGGGAGATTTC 417243 Query 263211 CAACCGGGTGACCATTG---ATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCA 263267 | || ||| ||| | ||||| ||||| || | ||| |||||||| ||| Sbjct 417244 TCAGCG---CACCGTTGTGCAGATGGCTGCCGATCGTGGTGCCTTCATCGACCAGTCCCA 417300 Query 263268 GTCGCTCAACCTGTACCTCGCCGACCCGAC---GGCCGAGAGCATCACGTCGATGCACGC 263324 ||| | ||| | || | ||||| || || | || |||||| |||||| Sbjct 417301 GTCCTTGAACATTCACATGAAGGACCCTACCATGGGCAAG---ATCACGAGCATGCACTT 417357 Query 263325 CTATGCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGC 263384 | | ||| | ||||||||||| ||||||||||| |||||||||| | | ||||| Sbjct 417358 CGCCGGCTGGAAGCTTGGCCTCAAGACCGGCATGTACTACCTGCGCACCCAGGCTGCTGC 417417 Query 263385 CAACGCCATTCAATTCACCGTCGATCAGG 263413 | | ||||||||||| || ||| ||| Sbjct 417418 TGCCCCTATTCAATTCACTGTTGATAAGG 417446 Score = 107 bits (118), Expect = 3e-17 Identities = 327/503 (65%), Gaps = 16/503 (3%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||| |||||| ||||| |||||| |||||| || || |||||||| || || Sbjct 416045 GGCGGCAACAAGCGTCCCGGCGCTTTTGCCATCTACCTTGAGCCATGGCACGCTGATGTC 416104 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | || |||||| |||||||||||||||| || || | |||| ||| Sbjct 416105 TTCGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGA---GGAAGTTC---GCGCTCGC 416158 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 ||||| || | |||||||| ||| || || ||| || | | || | || Sbjct 416159 GATCTTTTCCTGGCCCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGC 416218 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||| | ||| | ||||| |||| || ||||| || ||||| || | | Sbjct 416219 GACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTGCTACGGTGACGAG 416278 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084 ||||| ||| | || ||| || |||| || | | Sbjct 416279 TTTGAGGCCTTGTACGAGAAGTACGAGAAGGCTGGCAAGGGCCGCAAGACCATCAAGGC- 416337 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 ||| || || | |||| ||| | ||| ||| || | ||||||||||| |||| |||| Sbjct 416338 GCA-GA-AGCTTTGGTACGCCGTCCTCGAGGCTCAGACCGAGACCGGCAACCCCTTCATG 416395 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAG 262202 |||||||||| | ||||| | ||||||||| ||||||| || |||| || ||| Sbjct 416396 CTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTCG-CAG 416454 Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262 ||||||||||||| ||||| ||| ||| ||| | ||| |||| || |||| Sbjct 416455 -CTCCAACCTGTGCACAGAGATTGTCGAGTACTCGGCACCCGATGAGGTTGCCGTCTGCA 416513 Query 262263 ACCTCTCGAGCGTGGCCCTGCCC 262285 |||| | ||||||||||| Sbjct 416514 ACCTGGCCTCTCTGGCCCTGCCC 416536 >seq18890 Length=446397 Score = 131 bits (144), Expect = 2e-24 Identities = 165/223 (74%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944 |||||| ||| |||| ||||| ||| ||||| ||||||||||| ||||||||| Sbjct 160844 TTCATCTCACACATCCTTGCCTTCTTT-GCCGCTTCAGATGGCATCGTCAACGAGAACCT 160786 Query 1455945 GGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCA 1456004 | | ||||| | |||||||| | || ||||| || | || ||||| ||||| Sbjct 160785 CGTTGAGCGCTTCAGTGCCGAGGTCCAGGTTCCCGAGGCTCGATGCTTCTACGGCTTCCA 160726 Query 1456005 GATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAA 1456064 |||| || || |||||||||||||| || |||||||| || || ||||||||| |||| Sbjct 160725 GATCATGATGGAGAACATCCACTCTGAGACTTACTCGCTGCTCATTGACACCTACATCAA 160666 Query 1456065 GGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106 ||| || | | || |||||| | ||||| |||||||| || Sbjct 160665 GGAGCCTGCCCAG-AGGACCTATCTCTTCAATGCCATCGATAC 160624 Score = 118 bits (130), Expect = 2e-20 Identities = 240/348 (69%), Gaps = 19/348 (5%) Strand=Plus/Plus Query 1455769 CCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGG 1455828 ||| | ||| ||| |||||||| || ||||| ||||| ||||| ||||||||||| ||| Sbjct 408669 CCACCAGATTTGGCAAATGTAC-AAGAAGGCAGAGGCTTCCTTCTGGACCGCCGAAGAGA 408727 Query 1455829 TCGACCTC-----GGCGC----CGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGC 1455879 | || || || | |||| | | || | | | ||| || || || Sbjct 408728 TTGATCTATCTAAGGATCTCCACGACTGGAACAACAAGAT--CAATGAT-GATGAAAAGT 408784 Query 1455880 GCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAG 1455939 | |||||| ||| |||| ||||| ||| ||||| ||||||||||| |||| Sbjct 408785 AC---TTCATCTCACACATCCTTGCCTTCTTT-GCCGCTTCAGATGGCATCGTCAACGAG 408840 Query 1455940 AACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGG 1455999 ||||| | | ||||| | |||||||| | || ||||| || | || ||||| Sbjct 408841 AACCTCGTTGAGCGCTTCAGTGCCGAGGTCCAGGTTCCTGAGGCTCGATGCTTCTACGGC 408900 Query 1456000 TTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTAC 1456059 |||||||| || || ||||||||||| || || |||||||| || || ||||||||| Sbjct 408901 TTCCAGATTATGATGGAGAACATCCACTCCGAGACTTACTCGCTGCTCATTGACACCTAC 408960 Query 1456060 GTCAAGGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106 |||| || || | | || |||||| | ||||| |||||||| || Sbjct 408961 ATCAAAGAGCCTGCCCAG-AGGACCTATCTCTTCAATGCCATCGATAC 409007 Score = 98.7 bits (108), Expect = 1e-14 Identities = 174/246 (71%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCG-GTGGCGCTCATCG 1456589 ||| || ||| | || ||| ||||||| | | ||| | || || ||||| || ||| Sbjct 160280 CGATGCTGTCAATATTGAGCAAGAGTTCCTGACTGAGGCTCTCCCCTGTGGC-CTGCTCG 160222 Query 1456590 GCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGC 1456649 |||||||||| || |||||| ||||||||||| || || || |||||||| |||| Sbjct 160221 GCATGAACGCTACT-CTCATGAAGCAGTACATTGAGTTC-GTTGCAGACCGCCTCCTCGT 160164 Query 1456650 GGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGA 1456709 || |||||| || ||||| ||| | | ||||||| ||| | |||||| | Sbjct 160163 CGCCCTCGGCAACG-AGAAGGTTTACAAGGCTACCAACCCATTCGACTTCATGGAGAACA 160105 Query 1456710 TCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACGCCAAGGCCG 1456768 | || || | |||||||||||||| |||||| || || || || ||| ||||| | Sbjct 160104 TTTCTCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGCTGATTACCAGAAGGCTG 160045 Query 1456769 GCGTCA 1456774 | |||| Sbjct 160044 GTGTCA 160039 >seq25172 Length=14997 Score = 125 bits (138), Expect = 1e-22 Identities = 185/262 (71%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906 ||| ||| ||||| ||||| || | ||||||||||||| || || |||||| | || Sbjct 101 CGACTTGCGCGTCCGTGAGTCGGCCGTAGCGCAGGATGGCGCATCGCGACTGCAGCGGCT 160 Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966 |||||| | | ||| ||||||||| | ||| || || ||||| |||| | | | Sbjct 161 CGATGATCTTGTTGGACTGGTTGCAGGCGAAGGCGAAGCGGGTCGTGTTGGAGTAAATCT 220 Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026 |||| || ||||| |||||||| || ||| || | | ||||||||| || |||| Sbjct 221 CCATCGTGCGGCGGAGAGCCTGTTGCGCGCCCGATGTCATACTGTCGGCCTCATCAAGGA 280 Query 333027 TGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGA 333086 ||| || ||||||||| || || || || ||| | ||| |||| | |||||| Sbjct 281 TGACGAGCTTGTGGCGGCCCTGGGGGAGGGTAACTTTCTTCTGGGCGAAGCCCTTGATGC 340 Query 333087 TCTTGCGCACGACGTCCACGCC 333108 ||||| |||||||| | ||| Sbjct 341 GGTTGCGGACGACGTCGATGCC 362 >seq6780 Length=147702 Score = 125 bits (138), Expect = 1e-22 Identities = 185/262 (71%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906 ||| ||| ||||| ||||| || | ||||||||||||| || || |||||| | || Sbjct 82709 CGACTTGCGCGTCCGTGAGTCGGCCGTAGCGCAGGATGGCGCATCGCGACTGCAGCGGCT 82650 Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966 |||||| | | ||| ||||||||| | ||| || || ||||| |||| | | | Sbjct 82649 CGATGATCTTGTTGGACTGGTTGCAGGCGAAGGCGAAGCGGGTCGTGTTGGAGTAAATCT 82590 Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026 |||| || ||||| |||||||| || ||| || | | ||||||||| || |||| Sbjct 82589 CCATCGTGCGGCGGAGAGCCTGTTGCGCGCCCGATGTCATACTGTCGGCCTCATCAAGGA 82530 Query 333027 TGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGA 333086 ||| || ||||||||| || || || || ||| | ||| |||| | |||||| Sbjct 82529 TGACGAGCTTGTGGCGGCCCTGGGGGAGGGTAACTTTCTTCTGGGCGAAGCCCTTGATGC 82470 Query 333087 TCTTGCGCACGACGTCCACGCC 333108 ||||| |||||||| | ||| Sbjct 82469 GGTTGCGGACGACGTCGATGCC 82448 >seq225 Length=204298 Score = 125 bits (138), Expect = 1e-22 Identities = 185/262 (71%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906 ||| ||| ||||| ||||| || | ||||||||||||| || || |||||| | || Sbjct 84051 CGACTTGCGCGTCCGTGAGTCGGCCGTAGCGCAGGATGGCGCATCGCGACTGCAGCGGCT 83992 Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966 |||||| | | ||| ||||||||| | ||| || || ||||| |||| | | | Sbjct 83991 CGATGATCTTGTTGGACTGGTTGCAGGCGAAGGCGAAGCGGGTCGTGTTGGAGTAAATCT 83932 Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026 |||| || ||||| |||||||| || ||| || | | ||||||||| || |||| Sbjct 83931 CCATCGTGCGGCGGAGAGCCTGTTGCGCGCCCGATGTCATACTGTCGGCCTCATCAAGGA 83872 Query 333027 TGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGA 333086 ||| || ||||||||| || || || || ||| | ||| |||| | |||||| Sbjct 83871 TGACGAGCTTGTGGCGGCCCTGGGGGAGGGTAACTTTCTTCTGGGCGAAGCCCTTGATGC 83812 Query 333087 TCTTGCGCACGACGTCCACGCC 333108 ||||| |||||||| | ||| Sbjct 83811 GGTTGCGGACGACGTCGATGCC 83790 >seq27938 Length=10276 Score = 107 bits (118), Expect = 3e-17 Identities = 327/503 (65%), Gaps = 16/503 (3%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||| |||||| ||||| |||||| |||||| || || |||||||| || || Sbjct 10090 GGCGGCAACAAGCGTCCCGGCGCTTTTGCCATCTACCTTGAGCCATGGCACGCTGATGTC 10031 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | || |||||| |||||||||||||||| || || | |||| ||| Sbjct 10030 TTCGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGA---GGAAGTTC---GCGCTCGC 9977 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 ||||| || | |||||||| ||| || || ||| || | | || | || Sbjct 9976 GATCTTTTCCTGGCCCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGC 9917 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||| | ||| | ||||| |||| || ||||| || ||||| || | | Sbjct 9916 GACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTGCTACGGTGACGAG 9857 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084 ||||| ||| | || ||| || |||| || | | Sbjct 9856 TTTGAGGCCTTGTACGAGAAGTACGAGAAGGCTGGCAAGGGCCGCAAGACCATCAAGGC- 9798 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 ||| || || | |||| ||| | ||| ||| || | ||||||||||| |||| |||| Sbjct 9797 GCA-GA-AGCTTTGGTACGCCGTCCTCGAGGCTCAGACCGAGACCGGCAACCCCTTCATG 9740 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAG 262202 |||||||||| | ||||| | ||||||||| ||||||| || |||| || ||| Sbjct 9739 CTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTCG-CAG 9681 Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262 ||||||||||||| ||||| ||| ||| ||| | ||| |||| || |||| Sbjct 9680 -CTCCAACCTGTGCACAGAGATTGTCGAGTACTCGGCACCCGATGAGGTTGCCGTCTGCA 9622 Query 262263 ACCTCTCGAGCGTGGCCCTGCCC 262285 |||| | ||||||||||| Sbjct 9621 ACCTGGCCTCTCTGGCCCTGCCC 9599 Score = 105 bits (116), Expect = 1e-16 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 260000 ATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGC 260059 || || || ||||| ||||| |||||| || || | ||||||||| ||| || || Sbjct 10273 ATTGAAGGTATCTACGACACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGT 10214 Query 260060 ATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGC 260119 || ||| | || || | || ||| | ||| | ||| | || |||||||||||| Sbjct 10213 ATTGGTCTGAACGTCCATCGCATCCGTGCCACTGGCTCTTACATTGCCGGCACCAACGGC 10154 Query 260120 CAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGAC 260179 || |||||| | ||||||||||||||| || ||| |||||||||||||||| ||| Sbjct 10153 ACTTCAAACGGCATCACGCCCATGCTTCGCGTCTTCAACAACACGGCGCGCTACGTTGAC 10094 Query 260180 CAGTGC 260185 ||| || Sbjct 10093 CAGGGC 10088 >seq11514 Length=5315 Score = 107 bits (118), Expect = 3e-17 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 262912 CAGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAG 262971 || |||||| | || ||| | |||||||||| |||||||||||||| || |||||| Sbjct 164 CAACATGGCGTCCGTAACAGTCTTCTCGTGGCGCCCATGCCCACGGCCAGTACCTCGCAG 105 Query 262972 ATCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTG 263031 ||||| ||||||| |||| |||||| |||| |||||||||| |||||| ||| Sbjct 104 ATCCTTGGCAACAACGAGTGCTTCGAGCCTTACACGTCCAACATCTACCAGCGCCGTGTG 45 Query 263032 CTCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAG 263073 ||| | ||||| || || ||||||| | ||| ||||| Sbjct 44 CTCGCCGGCGAGTTCCAGGTCGTCAACCCCTGGCTGCTCAAG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7175102735937122