Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08-
07] 28,081 sequences; 99,189,222 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq28027 95.1 4e-14
seq18890 95.1 4e-14
>seq28027
Length=10271
Score = 95.1 bits (104), Expect = 4e-14
Identities = 117/159 (74%), Gaps = 1/159 (1%)
Strand=Plus/Minus
Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768
|| || |||||||| || || || || || | || || ||||| || || ||||||||
Sbjct 5261 CGCCTCGTCGCTTTCGCGGTCGTTGAGGGTATCTTCTTCAGCGGT-GCCTTCGCCTCCAT 5203
Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828
||||||| | || ||||| || || |||| || ||||| || ||||| || |||
Sbjct 5202 CTTCTGGCTCAAGAAGCGAGGCCTCATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTC 5143
Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||| ||||||||| | || ||||||||| ||||| ||
Sbjct 5142 TCGTGACGAGGGTCTTCACACCGACTTCGCTTGTCTGCT 5104
>seq18890
Length=446397
Score = 95.1 bits (104), Expect = 4e-14
Identities = 117/159 (74%), Gaps = 1/159 (1%)
Strand=Plus/Minus
Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768
|| || |||||||| || || || || || | || || ||||| || || ||||||||
Sbjct 160492 CGCCTCGTCGCTTTCGCGGTCGTTGAGGGTATCTTCTTCAGCGGT-GCCTTCGCCTCCAT 160434
Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828
||||||| | || ||||| || || |||| || ||||| || ||||| || |||
Sbjct 160433 CTTCTGGCTCAAGAAGCGAGGCCTCATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTC 160374
Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||| ||||||||| | || ||||||||| ||||| ||
Sbjct 160373 TCGTGACGAGGGTCTTCACACCGACTTCGCTTGTCTGCT 160335
Score = 95.1 bits (104), Expect = 4e-14
Identities = 117/159 (74%), Gaps = 1/159 (1%)
Strand=Plus/Plus
Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768
|| || |||||||| || || || || || | || || ||||| || || ||||||||
Sbjct 409138 CGCCTCGTCGCTTTCGCGGTCGTTGAGGGTATCTTCTTCAGCGGT-GCCTTCGCCTCCAT 409196
Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828
||||||| | || ||||| || || |||| || ||||| || ||||| || |||
Sbjct 409197 CTTCTGGCTCAAGAAGCGAGGCCTCATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTC 409256
Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
||| ||||||||| | || ||||||||| ||||| ||
Sbjct 409257 TCGTGACGAGGGTCTTCACACCGACTTCGCTTGTCTGCT 409295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1587764536065045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |