Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268145.1_202015-08-
07] 28,081 sequences; 99,189,222 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq24749 262 4e-65
seq27938 199 5e-46
seq23972 194 2e-44
seq11113 188 8e-43
seq22587 163 3e-35
seq26527 154 2e-32
seq1002 129 7e-25
seq20756 122 1e-22
seq25860 102 9e-17
seq22528 98.7 1e-15
seq891 84.2 2e-11
>seq24749
Length=740841
Score = 262 bits (290), Expect = 4e-65
Identities = 1133/1764 (64%), Gaps = 63/1764 (4%)
Strand=Plus/Minus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || ||||| ||||||||||| ||||||||||| |||||||||| | ||||
Sbjct 417411 GCCTGGGTGCGCAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAGCCGGCGAAGTGC 417352
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| ||| ||| | | || |||| || |||| ||||||| ||||| |||||
Sbjct 417351 ATGCTCGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTCAAGGACTGGGACTGG 417292
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCAT 80211
|||||| || |||||||| || ||||| | | || | || | ||| |||||
Sbjct 417291 TCGATGAAGGCACCACGATCGGCAGCCATCTGCACAACGGTGCGCTGAGAAATCTCCCAG 417232
Query 80212 ACTGTACGATACAC---CTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCCA 80268
|| || |||| ||| || | || | ||||||| | | | | || |
Sbjct 417231 ACAGTCTTGTACAGGGACTT--GACG-TCGGCGGGAATGTTGGGGATGTTCTGGATGGAA 417175
Query 80269 CCGTCCTTTACAATTT---GATTTTTCAAT---TCAGACGTCCAGACACCAAGCTTGTGC 80322
|| | || |||| |||| |||| |||||| || | ||| | |
Sbjct 417174 CCATTCTCGGCAATGATGCGATTCTTCATGCTATCAGAC---CAAAGACCCATGTCAACA 417118
Query 80323 AGATCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGC 80379
||||| || | || | | ||| | | || |||| || ||||| || |||
Sbjct 417117 AGATCCTTGAGCAGCCAGGGGTTGACGACCTGGA---ACTCGCCGGCGAGCACACGGCGC 417061
Query 80380 AGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTG 80439
| || | ||| | ||||||||||| || ||||||||| || |||||||| | ||
Sbjct 417060 TGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGCGAGGTA 417001
Query 80440 CTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATC- 80498
|| ||||| ||||| || | || | || || || | ||| || | |||||| |
Sbjct 417000 CTGGCCGTGGGCATGGGCGCCACGAGAAGACTGTTACGGACGCCATGTTGCTTGATCTGG 416941
Query 80499 CTCGCGCAAATCTGACCAAAAATCAACCCCA--ACGCTGTGACC--CCACATGTCGTGCT 80554
||| | | || | ||| || || | ||| |||| ||||||||||| |
Sbjct 416940 CTCTTG-AGGTCGGCCCAGTCCCAAAGGTCAGTAGGCT-TGACGTTCCACATGTCGTATT 416883
Query 80555 GCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGG 80614
| | ||| |||| || | || || ||| | | || ||| ||||| ||| || |
Sbjct 416882 GAAGGATACCCTGGGAGACGGGCGAGCCCTCATAGGTGGAGTAGGGGCCTTCCTCCTGAG 416823
Query 80615 CCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCA 80674
| |||| || ||| | ||||| ||||| || ||| |||||||| |||||| |
Sbjct 416822 CGAGCTTGCATGACATGGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGA 416763
Query 80675 -CACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGG 80733
| || | |||| || || || | || || | | ||| | ||||||| |
Sbjct 416762 GCTCCTTG-GCCTCAGGCGACTCAAAGGGCATGCGGAGAGCAAGGAAAGCATCAGCCAAG 416704
Query 80734 CCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAAT 80792
||||| || || | | | || || || |||||| |||| | | || ||||| |
Sbjct 416703 CCCTGGACACCAAGGCCAATGGGCCGATGGCGCATGTT-GCTGTTGCGAGCCTCGATGAC 416645
Query 80793 TGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATC 80852
|||||| ||| ||||||| | ||| ||||| | || ||| | || || |
Sbjct 416644 GGGGTAATGGTTCACGTCGATGATCCTGTTGAGGTTCCTGACGACGACCTGAGTGACCTG 416585
Query 80853 ATGAAGTTTCTGAAAGTCGAAT------TGGTTCCCCTTCACAAATGCCGGAAGGCTCAG 80906
|| || |||| ||||| | | ||| | || | || || ||| |||
Sbjct 416584 GTGGAGCTTCTTGAAGTCATACACGCCGTTGTTGTAATCAACGTAGGCGGGCAGGGCCAG 416525
Query 80907 GGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCA 80966
|| ||||| ||||| ||||| ||||| || | | | ||||||| || || |||||
Sbjct 416524 AGAGGCCAGGTTGCAGACGGCAACCTCATCGGGTGCCGAGTACTCGACAATCTCTGTGCA 416465
Query 80967 CAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTC 81026
|| || || ||| ||||| ||||| |||||||| |||| |||||| ||
Sbjct 416464 CAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATC 416405
Query 81027 CTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAAT 81086
||||||| |||| | ||| | ||||||||| ||| | || ||||| ||||| |||||
Sbjct 416404 CTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGACGGCGTACCAAAG 416345
Query 81087 CTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTC 81146
|| ||||||||| ||||||| ||||| | | | ||||| |||| |
Sbjct 416344 CTTCTGCGCCTTGATGGTCTTGCGGCCCTTGCCAGCCTTCTCGTACTTCTCGTACAAGGC 416285
Query 81147 GTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGT 81205
|| |||| | |||||| | ||| ||| ||| | ||||||||||| |||||||| ||
Sbjct 416284 CTCAAACTCGTCACCGTAGCAGT-CAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGAG 416226
Query 81206 GCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGA 81265
||||||| || ||||| ||| ||||||||| || |||||||| ||||| ||
Sbjct 416225 TCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCACAGGGCCAGGA 416166
Query 81266 ACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTC 81323
| || ||||| |||||| | ||||| | || ||||| ||| | || || || ||
Sbjct 416165 AAAGATCGCG--AGCGCGAACTTCCTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTC 416108
Query 81324 CATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------ 81377
| || || || ||||||||||| || || | ||| | | || | ||||
Sbjct 416107 GAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGCGCC---GGGACGCTTGTT 416051
Query 81378 GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACC 81437
||| ||||||| ||||| || || || ||| || || || | ||| || |||| ||
Sbjct 416050 GCCGCCCTGGTCAACGTAGCGCGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCC 415991
Query 81438 ATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGA 81497
| ||| ||||| || || | || || || |||| || | ||| ||| ||
Sbjct 415990 GTTTGAAGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTGGCACGGA---TGC-GATGGA 415935
Query 81498 ----AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCAT 81553
||||| || ||||| | | ||| || ||| ||||| || | ||| || |
Sbjct 415934 CGTTCAGACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGT 415875
Query 81554 AAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGC 81613
| || || || ||||| || | |||||||||| || ||| ||| |||| |||||
Sbjct 415874 AGATACCTTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCAGGACGACAGCTGAGCCT 415815
Query 81614 TTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCA 81673
| ||| || ||||| || || || | ||||| |||| | | | ||||| |
Sbjct 415814 GAGGCGTGCCAGCGTTGAAGAGGGTAGGAGATGCGTGTGTGAAGAATTTGCTGGACATGA 415755
Query 81674 GGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCA 81733
||| || || || |||| || || | ||| || ||||||| | |||||||
Sbjct 415754 GGTTGTACGTCTCAATGACACGCTCAACGTTGTCTCCCCAGATACCGACGGAAACACGCA 415695
Query 81734 TAAACATGTACTG-GGGCGTCTCG 81756
||| ||||| ||| ||||| ||||
Sbjct 415694 TAATCATGTGCTGCGGGCG-CTCG 415672
Score = 98.7 bits (108), Expect = 1e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || ||||| ||||||||||| ||||||||||| |||||||||| | ||||
Sbjct 446593 GCCTGGGTGCGCAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAGCCGGCGAAGTGC 446652
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| ||| ||| | | || |||| || |||| ||||||| |||||||||||
Sbjct 446653 ATGCTCGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTCAAGGACTGAGACTGG 446712
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCAT 80180
|||||| || |||||||| || |||||
Sbjct 446713 TCGATGAAGGCACCACGATCGGCAGCCAT 446741
>seq27938
Length=10276
Score = 199 bits (220), Expect = 5e-46
Identities = 383/560 (68%), Gaps = 15/560 (3%)
Strand=Plus/Plus
Query 80893 GCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCG 80952
|| || ||| ||| || ||||| ||||| ||||| ||||| || | | | |||||
Sbjct 9597 GCGGGCAGGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCATCGGGTGCCGAGTACTCG 9656
Query 80953 ACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTG 81012
|| || || ||||||| || || ||| ||||| ||||| |||||||| ||||
Sbjct 9657 ACAATCTCTGTGCACAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTG 9716
Query 81013 GCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGG 81072
|||||| ||||||||| |||| | ||| | ||||||||| ||| | || ||||
Sbjct 9717 CGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGG 9776
Query 81073 ATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATAC 81132
| ||||| ||||| || ||||||||| ||||||| ||||| | | | |||
Sbjct 9777 ACGGCGTACCAAAGCTTCTGCGCCTTGATGGTCTTGCGGCCCTTGCCAGCCTTCTCGTAC 9836
Query 81133 TTGGCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTT 81191
|| |||| | || |||| | |||||| | ||| ||| ||| | |||||||||||
Sbjct 9837 TTCTCGTACAAGGCCTCAAACTCGTCACCGTAGCAGT-CAGCAAGGCCAGGGCACTCGTT 9895
Query 81192 AGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGAT 81251
|||||||| || ||||||| || ||||| ||| ||||||||| || |||||
Sbjct 9896 GGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGAT 9955
Query 81252 CCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGC 81309
||| ||||| ||| || ||||| |||||| | ||||| | || ||||| |||
Sbjct 9956 CCACAGGGCCAGGAAAAGATCGCG--AGCGCGAACTTCCTCCTTGCCGTGGTTCTTGCGG 10013
Query 81310 AACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCC 81369
| || || || || | || || || ||||||||||| || || | ||| | | ||
Sbjct 10014 AGGTCAAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGCGCC- 10072
Query 81370 TTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAAC 81423
| |||| ||| ||||||| ||||| || || || ||| || || || | |
Sbjct 10073 --GGGACGCTTGTTGCCGCCCTGGTCAACGTAGCGCGCCGTGTTGTTGAAGACGCGAAGC 10130
Query 81424 ATAGGGATGATACCATCTGA 81443
|| || |||| || | |||
Sbjct 10131 ATGGGCGTGATGCCGTTTGA 10150
>seq23972
Length=267833
Score = 194 bits (214), Expect = 2e-44
Identities = 179/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||||||||||||||| ||||||||||| || ||||||||||| |||||
Sbjct 225067 ATGCAGATCTTTGTCAAGACGCTGACCGGCAAGACCATCACTCTTGAGGTGGAGTCTTCC 225126
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||| | || ||||||||||||||||| |||||||| |||||
Sbjct 225127 GACACCATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCCGACCAA 225186
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| || ||||||| |||||| | | ||||| ||
Sbjct 225187 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGTACTTTGTCCGACTACAAC 225246
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| ||||||||||| || || | || || || |||||
Sbjct 225247 ATTCAGAAGGAGTCCACTCTTCACCTCGTTCTCCGCCTCCGTGGTGG 225293
Score = 163 bits (180), Expect = 3e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| ||||||||||| ||||| |||||||| || | || || || |||
Sbjct 225295 ATGCAAATCTTCGTCAAGACGCTCACCGGTAAGACTATCACATTGGAAGTCGAATCATCC 225354
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| ||||| | || || || ||||||||||| |||||||| || ||
Sbjct 225355 GACACGATCGACAATGTGAAGTCCAAGATCCAAGACAAGGAGGGCATTCCTCCCGATCAA 225414
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || ||||| ||||| ||||| || ||||| | || ||||| | ||||| ||
Sbjct 225415 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTGTCTGACTACAAC 225474
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| || || || ||| | ||| | ||||| || ||||||||
Sbjct 225475 ATCCAGAAGGAGTCGACCCTGCATTTGGTCCTCCGTCTGCGTGGTGGACA 225524
Score = 150 bits (166), Expect = 2e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || |||||||| ||||| || | ||| | || | ||| |
Sbjct 224863 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTTAAGTCG 224922
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| || ||||| ||||| ||||| || ||||| ||||| |||
Sbjct 224923 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAACAGCGCCTGATTTTCGCTGGCAAG 224982
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||||| || ||||| | ||||| || |||| ||||| || || || ||
Sbjct 224983 CAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 225042
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | ||||||||||||||
Sbjct 225043 CTTGTCCTCCGTCTTCGCGGTGG 225065
>seq11113
Length=490148
Score = 188 bits (208), Expect = 8e-43
Identities = 178/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || ||||||||||| || ||||| |||||||||||
Sbjct 77673 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACCATCACTCTCGAGGTTGAGTCTTCC 77614
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || ||||||||||||||||| |||||||| |||||
Sbjct 77613 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCTCCCGACCAA 77554
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || |||||||| ||||| || ||||||| |||||| || | ||||| ||
Sbjct 77553 CAGCGCCTCATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGTACTCTGTCCGACTACAAC 77494
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || |||||||| || || | || ||||| |||||
Sbjct 77493 ATTCAGAAGGAGTCGACTCTTCACCTCGTTCTCCGCCTTCGTGGTGG 77447
Score = 163 bits (180), Expect = 3e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || ||||| |||||||| || | || || || |||
Sbjct 77445 ATGCAAATCTTCGTCAAGACACTCACCGGTAAGACTATCACATTGGAAGTCGAATCATCC 77386
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || || ||||||||||| || ||||| |||||
Sbjct 77385 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAA 77326
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || ||||| ||||| ||||| |||||||||| ||| ||||| | ||||| ||
Sbjct 77325 CAGCGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACCCTGTCTGACTACAAC 77266
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| || || || ||| | ||| | ||||| || ||||||||
Sbjct 77265 ATCCAGAAGGAGTCGACCCTGCATTTGGTCCTCCGTCTGCGTGGTGGACA 77216
>seq22587
Length=423
Score = 163 bits (180), Expect = 3e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| ||||| |||||||| || || ||||||||||| || |||||||| |||||
Sbjct 83 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 142
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | ||| | ||| | ||| | || || |||||||||||||| || || || |||
Sbjct 143 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 202
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|| ||||| || ||||||||||| ||||| || ||||||| || || || | |||||
Sbjct 203 CAACAGCGCCTGATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTAC 262
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| ||||| ||||| || || || || | || || || |||||
Sbjct 263 AACATCCAGAAGGAGTCCACCCTGCACCTCGTGCTCCGCCTGCGTGGTGG 312
>seq26527
Length=223112
Score = 154 bits (170), Expect = 2e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| ||||| |||||||| || || ||||||||||| || |||||||| |||||
Sbjct 222806 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 222747
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | ||| | ||| | ||| | || || |||||||||||||| || || || |||
Sbjct 222746 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 222687
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|| ||||| || || || ||||| ||||| || ||||||| || || || | |||||
Sbjct 222686 CAACAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTAC 222627
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| ||||| ||||| || || || || | || || || |||||
Sbjct 222626 AACATCCAGAAGGAGTCCACCCTGCACCTCGTGCTCCGCCTGCGTGGTGG 222577
>seq1002
Length=198801
Score = 129 bits (142), Expect = 7e-25
Identities = 137/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || |||||||| || || |||||||| ||||| || | ||||
Sbjct 112725 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCCTCCGACACCATT 112666
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || || |||||||||||||| || || || ||||| ||||| ||
Sbjct 112665 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTG 112606
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
||||| || || ||||| |||||||||| || || || | ||||| || |||| |||
Sbjct 112605 ATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAG 112546
Query 27595 G 27595
|
Sbjct 112545 G 112545
Score = 114 bits (126), Expect = 1e-20
Identities = 134/181 (74%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || |||||||| || || |||||||| ||||| || | |||
Sbjct 118281 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCCTCCGACACCATC 118222
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || || |||||||||||||| || || || ||||| ||||| ||
Sbjct 118221 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGCCTG 118162
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
||||| || || ||||| || ||||||| || || | | ||||| || |||| |||
Sbjct 118161 ATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCCGACTACAACATCCAGAAG 118102
Query 27595 G 27595
|
Sbjct 118101 G 118101
>seq20756
Length=5129
Score = 122 bits (134), Expect = 1e-22
Identities = 129/170 (76%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || |||||||| ||||| || | ||| | || | ||| |
Sbjct 5066 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTTAAGTCG 5007
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| || ||||| ||||| ||||| || ||||| ||||| |||
Sbjct 5006 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAACAGCGCCTGATTTTCGCTGGCAAG 4947
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATC 27599
|| || ||||||| || ||||| | ||||| || |||| ||||| ||
Sbjct 4946 CAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTC 4897
>seq25860
Length=735992
Score = 102 bits (112), Expect = 9e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| ||||| |||||||| || || ||||||||||| || |||||||| |||||
Sbjct 34169 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 34228
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | ||| | ||| | ||| | || || |||||||||||||| || || || |||
Sbjct 34229 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 34288
Query 27523 CAGCAGCGTCTAAT 27536
|| ||||| || ||
Sbjct 34289 CAACAGCGCCTGAT 34302
>seq22528
Length=336080
Score = 98.7 bits (108), Expect = 1e-15
Identities = 183/269 (68%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043
||||| || || ||| ||||| ||||| || | ||| ||| |||||| |||||| |
Sbjct 27567 GACGGTCTGAAACCTGGTCAGCGAAAGGTCATGTTCGCTTGCTTCAAGAGGAACCTCACC 27626
Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103
| ||| |||||| | | | || | || || || | || | | || || ||||||
Sbjct 27627 AAGGACCAGAAGGTCGTGGAATTGGCCGGTTATGTTTCCGAAAAGGCCGCGTACCACCAC 27686
Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163
||||| ||| || || || || | ||| || ||||| ||||||||| | ||
Sbjct 27687 GGCGAAATGTCTCTTCAACAGACGATCATTGGCCTCGCCCAGAATTTTGTCGGTTCGAAC 27746
Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223
|| | |||| |||||||| ||| | ||||| |||| || |||||||| ||
Sbjct 27747 AATGTCAACTGCCTCGAGCCCAGTGGTAACTTTGGTTCCCGTCTTGCCGGTGGATCAGAC 27806
Query 32224 GCTGCGAGCTCCCGTTACATCTTCACCCG 32252
||||| ||| ||||||| ||| ||| ||
Sbjct 27807 GCTGCCAGCCCCCGTTATATCCACACGCG 27835
>seq891
Length=198929
Score = 84.2 bits (92), Expect = 2e-11
Identities = 180/269 (67%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043
||||| || || ||| ||||| ||||| || | ||| ||| |||||| |||||
Sbjct 114663 GACGGTCTGAAACCTGGTCAGCGGAAGGTCATGTTCGCTTGCTTCAAGAGAAACCTCATC 114722
Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103
| ||| |||||| | | | || | || || || | || | | || || ||||||
Sbjct 114723 AAAGACCAGAAGGTCGTGGAATTGGCCGGTTATGTTTCCGAAAAGGCCGCGTACCACCAC 114782
Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163
|| || ||| || || || || | ||| || ||||||||||||||| ||||
Sbjct 114783 GGTGAAATGTCTCTTCAACAGACGATCATTGGCCTCGCCCAGAACTTTGTCGGTTCAAAC 114842
Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223
|| | |||| |||||||| ||| | || || | || || |||||||| ||
Sbjct 114843 AATGTCAACTGCCTCGAGCCCAGTGGTAACTTCGGTTCTCGTCTTGCCGGTGGATCAGAC 114902
Query 32224 GCTGCGAGCTCCCGTTACATCTTCACCCG 32252
||||| ||| ||||||| ||| ||| ||
Sbjct 114903 GCTGCCAGCCCCCGTTATATCCACACGCG 114931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570110213920720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |