Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08-
07] 38,382 sequences; 100,520,033 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq35052 98.7 2e-15
seq4447 95.1 3e-14
>seq35052
Length=15850
Score = 98.7 bits (108), Expect = 2e-15
Identities = 113/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 254017 TCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGT 254076
|| |||| || ||||| || ||||||||||| || |||||||||||||| || | | |
Sbjct 2381 TCTACGGCCCCCCCGGCACGGGCAAGACGTCGACGATCCTGGCGCTGGCACGGCGCATCT 2322
Query 254077 TGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGT 254136
||| | |||| || | || ||||| ||||| ||||| || ||||| |||||
Sbjct 2321 ACGGCCCCGAGAACGTGCGGCAGATGGTGCTGGAGCTCAACGCATCCGACGACCGCGGCA 2262
Query 254137 TGGACGTCGTCCGCGACAAGATCAAGACTTTC 254168
| ||||| || ||||| |||||||||| |||
Sbjct 2261 TCGACGTGGTGCGCGAGCAGATCAAGACGTTC 2230
>seq4447
Length=142791
Score = 95.1 bits (104), Expect = 3e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 254017 TCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGT 254076
|| |||| || ||||| || ||||||||||| || |||||||||||||| || | | |
Sbjct 49619 TCTACGGCCCCCCCGGCACGGGCAAGACGTCGACGATCCTGGCGCTGGCGCGGCGCATCT 49678
Query 254077 TGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGT 254136
||| | |||| || | || ||||| || || ||||| || ||||| |||||
Sbjct 49679 ACGGCCCCGAGAACGTGCGGCAGATGGTGCTGGAACTCAACGCGTCCGACGACCGCGGCA 49738
Query 254137 TGGACGTCGTCCGCGACAAGATCAAGACTTTC 254168
| ||||| || ||||| |||||||||| |||
Sbjct 49739 TCGACGTGGTGCGCGAGCAGATCAAGACATTC 49770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073238354568576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |