Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08-
07] 38,382 sequences; 100,520,033 total letters
Query= NC_005261.2
Length=137821
Score E
Sequences producing significant alignments: (Bits) Value
seq5557 120 3e-22
>seq5557
Length=425908
Score = 120 bits (132), Expect = 3e-22
Identities = 169/230 (73%), Gaps = 12/230 (5%)
Strand=Plus/Plus
Query 99544 CGCACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCA-GGCCTC--CAGG 99600
||||| || || | |||||||||||||||||||||||| |||||| ||| || ||||
Sbjct 171417 CGCACCGTCAGGCACGTGTTGAGCAGCAGCACGCCGCGGTCCGCCCACGGCGTCAGCAGG 171476
Query 99601 CA-GCCGTGCTGCGGCCGCGGGGTCCCGG---GGAAGTTCTTCTGCACGGCCGCGTAGAT 99656
| ||| || || ||| |||| || || || ||| || || ||| ||| ||
Sbjct 171477 CCCGCCTTGTTG-GGCGGCGGCGTGAAGGTCGGGTAGTCGCGCTTCAGGGCTATGTACAT 171535
Query 99657 GTTCTGGAGGCTGGGCGGGATCGGAACGCCGCGGTTC--ACGCTGAAGGCCAGGCCGTGG 99714
||||| |||| || || ||| || || || | ||| |||||| |||||||||
Sbjct 171536 GTTCTTGAGGGACGGGGGCGCCGG--CGTCGGGGCCCGGACGGAGAAGGCGAGGCCGTGG 171593
Query 99715 GCCTGCCCGTGGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGAC 99764
||||| | | ||||||||||||||||||| |||||||||||||||||
Sbjct 171594 GCCTGGTTGATGTTGTGGTAGGGGTCCTGGCCGAGGATGACGACCTTGAC 171643
Score = 84.2 bits (92), Expect = 2e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 99699 GAAGGCCAGGCCGTGGGCCTGCCCGTGGCTGTGGTAGGGGTCCTGGCCCAGGATGACGAC 99758
|||||| |||||||||||||| | | ||||||||||||||||||| |||||||||||
Sbjct 171780 GAAGGCGAGGCCGTGGGCCTGGTTGACGTTGTGGTAGGGGTCCTGGCCGAGGATGACGAC 171839
Query 99759 CTTGAC 99764
||||||
Sbjct 171840 CTTGAC 171845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440687667586320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |