Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08- 07] 38,382 sequences; 100,520,033 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq3335 82.4 7e-11 >seq3335 Length=453419 Score = 82.4 bits (90), Expect = 7e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 5357 ACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCT 5416 ||| |||||||| ||| || ||| ||||||| | | ||| | ||| |||||||| Sbjct 234236 ACCGCAAAGTCGGTGTCGGCGTGGTTGAACAGCAGGATCTTGACCTGGCCGCGGTAGTCG 234177 Query 5417 TCGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGT 5476 | || || |||||||||||| |||||| ||||| ||| || ||||| || || || Sbjct 234176 GCATCAATGACGCCAGCGCCCGTGTCGATGAAGTGCTTGGAGGCGAGGCCAGAGCGGGGG 234117 Query 5477 GCTATGCGTCCGT 5489 || ||||| |||| Sbjct 234116 GCGATGCGGCCGT 234104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447535580551840