Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08-
07] 38,382 sequences; 100,520,033 total letters
Query= NC_006151.1
Length=143461
Score E
Sequences producing significant alignments: (Bits) Value
seq5557 98.7 9e-16
>seq5557
Length=425908
Score = 98.7 bits (108), Expect = 9e-16
Identities = 168/234 (72%), Gaps = 11/234 (5%)
Strand=Plus/Plus
Query 94192 GCGC-CGCACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCA-GGCCTC- 94248
|||| ||||| ||||| |||||| ||||||||||| |||||| |||||| ||| ||
Sbjct 171412 GCGCGCGCACCGTCAGGCACGTGTTGAGCAGCAGCACGCCGCGGTCCGCCCACGGCGTCA 171471
Query 94249 -CAGGCA-GCCGTG---GGCGGGCGCGGGCAGCGTCGGGTACGTCGCCCGG-ACCGCCGC 94302
||||| ||| || ||||| ||| | || |||||||| ||||| | | ||
Sbjct 171472 GCAGGCCCGCCTTGTTGGGCGGCGGCGTGAAG-GTCGGGTA-GTCGCGCTTCAGGGCTAT 171529
Query 94303 GAAGATGTTGGCCAGGCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCCC 94362
| | ||||| ||| |||||| |||| | | ||||||| |||||| || ||
Sbjct 171530 GTACATGTTCTTGAGGGACGGGGGCGCCGGCGTCGGGGCCCGGACGGAGAAGGCGAGGCC 171589
Query 94363 GTGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGAC 94416
|||||||||| |||||| ||||||||||||| |||||| ||||||||
Sbjct 171590 GTGGGCCTGGTTGATGTTGTGGTAGGGGTCCTGGCCGAGGATGACGACCTTGAC 171643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 458727008607120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |