Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08-
07] 38,382 sequences; 100,520,033 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq31830 452 7e-122
seq336 325 7e-84
seq31807 273 4e-68
seq37228 150 3e-31
seq37272 122 2e-22
seq4446 114 2e-20
seq7069 102 2e-16
seq2280 96.9 7e-15
>seq31830
Length=311768
Score = 452 bits (500), Expect = 7e-122
Identities = 1222/1852 (66%), Gaps = 67/1852 (4%)
Strand=Plus/Plus
Query 243761 GCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGG 243820
|| |||| ||| | |||||||||||||||||||||||| ||| |||| || || |
Sbjct 110012 GCAGCCTGGGTGCGCAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAGCCGGCGAAG 110071
Query 243821 TGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTG 243880
|||||| ||| | ||| ||| | ||||| | | | ||| | ||
Sbjct 110072 TGCATGCTCGTGATCTTGCCCATGGTA------GGGTCCTTCATGT---GAATG---TTC 110119
Query 243881 AGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGA-GGTCCTT 243939
| ||||||| |||||||| ||||| | || || || ||||| | | ||| |
Sbjct 110120 AAGGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACAACGGTGCG- 110178
Query 243940 CTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGAT 243999
|||||| ||||| | | |||||||| | || ||||| || |||| | |||
Sbjct 110179 CTGAGAAATCTCCCAGACAGTCTTGTACAGGGACTTGACGTCGGCGGGAATGTTGGGGAT 110238
Query 244000 GTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCC 244059
|||||| | || || || | | | |||| | | |||| |||| ||| || ||
Sbjct 110239 GTTCTGGATGGAACCATTCTCGGCAATGATGCGATTCTTCATGCTATCAGACCAAAGACC 110298
Query 244060 CAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCAC 244119
|| | | || ||| || ||| ||| || ||||| ||||| || | |||||
Sbjct 110299 CATGTCAACAAGATCCTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCGGCGAGCAC 110358
Query 244120 GCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTG 244179
|| |||||||||| |||| || ||||||| || ||| ||||||| || |||||
Sbjct 110359 ACGACGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATCTG 110418
Query 244180 CGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTG 244239
|| || || || || |||||||||| ||| || |||||||| | |||||||| ||
Sbjct 110419 CGAGGTACTGGCCGTGGGCATGGGCGCCACGAGAAGACTGTTACGGACGCCGTGTTGCTT 110478
Query 244240 GATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCC 244299
||| || | || ||| ||||||||| | | | | ||| |||| |
Sbjct 110479 GATCTGGCTCTTCAGGTCGGCCCAGTCCCAAAGGTCAGT-AGGC--------TTGACGTT 110529
Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359
||||||||| | || || | |||| | |||||| |||||| ||||| | ||||||
Sbjct 110530 CCACATGTCGTATTGAAGGATACCCTGGGAGACGGGCGAGCCCTCATAGGTGGAGTAGGG 110589
Query 244360 ACCGTCGCGCTGGGCCAGCTTACAGCTC-TCGTCGAGGGCGGCGTAGTAGATGGTCTCGA 244418
|| || ||| || ||||| || | | ||| ||||| |||| |||||||||||| |
Sbjct 110590 GCCTTCCTCCTGAGCGAGCTTGCATGACATGGTC-AGGGCAGCGTGGTAGATGGTCTCAA 110648
Query 244419 AGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGA-----AGGGGATGCCCATCAT 244473
||||| |||||| | || ||||| |||| || |||| |||| |
Sbjct 110649 AGATCTGCTTGTTGAGCTCCTTGGCCT-----CAGGAGACTCAAAGGGCATGCGGAGAGC 110703
Query 244474 CATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA 244533
| ||| | || |||| ||||| || || | ||| ||||| | || ||| |||||
Sbjct 110704 AAGGAAAGCATCAGCCAAGCCCTGGACACCAAGGCCAATGGGCCGATGGCGCATGTTGCT 110763
Query 244534 GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGT 244593
| || ||| ||||||||| ||| ||||||| | | |||||||||| |
Sbjct 110764 GTTGCGAGCCTCGATGACGGGGTAATGGTTCACGTCGATGATCCTGTTGAGGTTCC---- 110819
Query 244594 GATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGAT 244653
|| |||||| | | | | | || | | || | || || | || || |
Sbjct 110820 -----TGACGACGACCTGAGTGACCTGGTGGAGCTT---CTTGAAGTCATACACGCCGTT 110871
Query 244654 GGTGATCCTCA-CAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCT 244712
| || | ||| | | || ||||| | |||||||||||||||||| ||||| |
Sbjct 110872 GTTG-TAATCAACGTAGGCGGGCAGGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCAT 110930
Query 244713 CCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGT 244772
| | | ||||| ||||||||| ||||| ||||| || ||||| || ||||
Sbjct 110931 CGGGTGCCGAGTACTCGACAATCTCTGTGCACAGGTTGGAGCTGCGAATGGTACCAAGGT 110990
Query 244773 GCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCT 244832
|| || ||| |||| ||||||| |||||||||||||||||||| |||||||
Sbjct 110991 TCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCT 111050
Query 244833 CGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT 244892
|| ||| || |||||||| || ||| || | | ||||||| ||| |||| |||
Sbjct 111051 CGGTCTGAGCCTCGAGGACGGCGTACCAAAGCTTCTGCGCCTTGATGGTCTTGCGGCCCT 111110
Query 244893 TGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTA 244952
|||| | |||||| ||||| |||||| |||||| || || || | |
Sbjct 111111 TGCCAGCCTTCTCGTACTTCTCGTACAAGGCCTCAAACTCGTCACCGTAGCAGTCAGCAA 111170
Query 244953 GGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCA 245012
|||| |||||| |||||||||||| |||| |||||| | || ||| | || ||
Sbjct 111171 GGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCA 111230
Query 245013 TGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGC 245072
||||||| ||||||||||| | |||| ||||||| || | | | ||| ||| ||
Sbjct 111231 TGAAGAGATCGGGGATCCACAAGGCCAGGAAGAGATCGCGAGCGCGAACCTCCTCCTTGC 111290
Query 245073 CAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGA 245132
| |||||| | || || | || || ||||| || ||||||| ||||| | |||||
Sbjct 111291 CGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGA 111350
Query 245133 CAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGA 245192
|| | |||||||| ||||||||||| |||||||| || | | | |||||
Sbjct 111351 TGGCAAAAGCGCCGGGACGCTTGTTGCCGCCCTGGTCAACGTAGCGCGCCGTGTTGTTGA 111410
Query 245193 AGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGC 245252
||| ||| || | ||| |||||||| || |||||||||||| ||||| | ||
Sbjct 111411 AGACGCGAAGCATGGGCGTGATGCCGTTTGAAGTGCCGTTGGTGCCGGCAATGTAAGAGC 111470
Query 245253 CCTTGCCCCTGAGGTTGCTGATGGA----CATGCCTAGTCCGCCGGCGTGCTTGGAGATG 245308
| || | | || ||| |||||| || || | || || || |||||||||
Sbjct 111471 CAGTGGCAC---GGATGC-GATGGACGTTCAGACCAATACCACCAGCCATCTTGGAGATC 111526
Query 245309 AGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGC 245368
| ||| ||| |||||| |||||| || || || |||||||| |||||||| | |
Sbjct 111527 ATGGCACAGGTCTTGAGGGTGTCGTAGATACCTTCAATGCTGTCATCCTTCATGTCAACC 111586
Query 245369 AGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCG 245428
|| |||||||| |||||||| | || || ||| | |||||| || || || |||
Sbjct 111587 AGGAAGCAGGACGACAGCTGAGCCTGAGGCGTGCCAGCGTTGAAGAGGGTAGGAGATGCG 111646
Query 245429 TGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCG 245488
|| || ||| | ||| || | || |||||||| | | | || | ||||||
Sbjct 111647 TGTGTGAAGAATTTGCTGGACATGAGGTTGTACGTCTCAATGACACGCTCAACGTTGTCT 111706
Query 245489 CCGTGGAT-CTGCAGGGCGCACCTCATGAGGGTGTGCTG-GGGCGTCTCG---ATGGGTC 245543
|| ||| | | || || | ||| | ||||||| ||||| |||| || |
Sbjct 111707 CCCCAGATACCGACGGAAACA-CGCATAATCATGTGCTGCGGGCG-CTCGGCAATCTTGC 111764
Query 245544 CCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTA 245595
| || | |||||| | ||||| ||||| || |||||||| ||||||||
Sbjct 111765 CGTCAAG---CTTGAGGAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAGTA 111813
>seq336
Length=177044
Score = 325 bits (360), Expect = 7e-84
Identities = 628/917 (68%), Gaps = 16/917 (2%)
Strand=Plus/Minus
Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746
|||||||||||||||||| ||||| || | | ||||| ||||||||| ||||| ||
Sbjct 111105 GGCCAGGTTGCAGACGGCAACCTCATCGGGTGCCGAGTACTCGACAATCTCTGTGCACAG 111046
Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806
||| || ||||| || |||| || || ||| |||| ||||||| |||||
Sbjct 111045 GTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTT 110986
Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866
||||||||||||||| ||||||||| ||| || |||||||| || ||| || |
Sbjct 110985 GTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGACGGCGTACCAAAGCTT 110926
Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926
| ||||||| ||| |||| ||||||| | |||||| ||||| ||||||
Sbjct 110925 CTGCGCCTTGATGGTCTTGCGGCCCTTGCCAGCCTTCTCGTACTTCTCGTACAAGGCCTC 110866
Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCA 244986
|||||| || || || | ||||| |||||| |||||||||||| ||||
Sbjct 110865 AAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCA 110806
Query 244987 CTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAG 245046
|||||| | || ||| | || ||||||||| ||||||||||| | |||| |||||||
Sbjct 110805 GTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCACAAGGCCAGGAAGAG 110746
Query 245047 GTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGAC 245106
|| | | | ||| ||| ||| |||||| | || || | || || |||||
Sbjct 110745 ATCGCGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGAC 110686
Query 245107 GTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTG 245166
|| ||||||| ||||| | ||||| || | |||||||| ||||||||||| |||||
Sbjct 110685 ATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGCGCCGGGACGCTTGTTGCCGCCCTG 110626
Query 245167 GTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTG 245226
||| || | | | |||||||| ||| || | ||| |||||||| ||
Sbjct 110625 GTCAACGTAGCGCGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTTGAAGT 110566
Query 245227 GCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGA----CATGC 245282
|||||||||||| ||||| | ||| || | | || ||| |||||| || |
Sbjct 110565 GCCGTTGGTGCCGGCAATGTAAGAGCCAGTGGCAC---GGATGC-GATGGACGTTCAGAC 110510
Query 245283 CTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCT 245342
| | || || || ||||||||| | ||| ||| |||||| |||||| || || |
Sbjct 110509 CAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCTT 110450
Query 245343 CCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGC 245402
| ||||| || |||||||| || ||| |||||||| |||||||| | || ||| |||
Sbjct 110449 CAATGCTATCATCCTTCATGTCGACCAGGAAGCAGGACGACAGCTGAGCCTGGGGCGTGC 110390
Query 245403 ACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACG 245462
| |||||| || || || |||||| || ||| | | | || | || |||||
Sbjct 110389 CAGCGTTGAAGAGGGTAGGAGAGGCGTGTGTGAAGAATTTGTTGGACATGAGGTTGTACG 110330
Query 245463 TCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGAT-CTGCAGGGCGCACCTCATGAGGGTG 245521
||| | | | || | |||||| || ||| | || | || | ||| | ||
Sbjct 110329 TCTCAATGACACGCTCAACGTTGTCTCCCCAGATACCAACGGACACA-CGCATAATCATG 110271
Query 245522 TGCTG-GGGCGTCTCGATGGGTCCCTCGGGTC--CCTTGAGCATGTAGGAGCGCTCGAGC 245578
||||| ||||| |||| | | | | ||| |||||| | || |||||||| ||
Sbjct 110270 TGCTGCGGGCG-CTCG--GCGATCTTGCCGTCAAGCTTGAGGAGATAAGAGCGCTCCAGA 110214
Query 245579 GTCTTGAACCCAAAGTA 245595
|||||||| ||||||||
Sbjct 110213 GTCTTGAAGCCAAAGTA 110197
>seq31807
Length=5160
Score = 273 bits (302), Expect = 4e-68
Identities = 462/667 (69%), Gaps = 8/667 (1%)
Strand=Plus/Plus
Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746
|||||||||||||||||| ||||| || | | ||||| ||||||||| ||||| ||
Sbjct 4498 GGCCAGGTTGCAGACGGCAACCTCATCGGGTGCCGAGTACTCGACAATCTCTGTGCACAG 4557
Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806
||| || ||||| || |||| || || ||| |||| ||||||| |||||
Sbjct 4558 GTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTT 4617
Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866
||||||||||||||| ||||||||| ||| || |||||||| || ||| || |
Sbjct 4618 GTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGACGGCGTACCAAAGCTT 4677
Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926
| ||||||| ||| |||| ||||||| | |||||| ||||| ||||||
Sbjct 4678 CTGCGCCTTGATGGTCTTGCGGCCCTTGCCAGCCTTCTCGTACTTCTCGTACAAGGCCTC 4737
Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCA 244986
|||||| || || || | ||||| |||||| |||||||||||| ||||
Sbjct 4738 AAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCA 4797
Query 244987 CTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAG 245046
|||||| | || ||| | || ||||||||| ||||||||||| | |||| |||||||
Sbjct 4798 GTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCACAAGGCCAGGAAGAG 4857
Query 245047 GTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGAC 245106
|| | | | ||| ||| ||| |||||| | || || | || || |||||
Sbjct 4858 ATCGCGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGAC 4917
Query 245107 GTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTG 245166
|| ||||||| ||||| | ||||| || | |||||||| ||||||||||| |||||
Sbjct 4918 ATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGCGCCGGGACGCTTGTTGCCGCCCTG 4977
Query 245167 GTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTG 245226
||| || | | | |||||||| ||| || | ||| |||||||| ||
Sbjct 4978 GTCAACGTAGCGCGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTTGAAGT 5037
Query 245227 GCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGA----CATGC 245282
|||||||||||| ||||| | ||| || | | || ||| |||||| || |
Sbjct 5038 GCCGTTGGTGCCGGCAATGTAAGAGCCAGTGGCAC---GGATGC-GATGGACGTTCAGAC 5093
Query 245283 CTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCT 245342
| | || || || ||||||||| | ||| ||| |||||| |||||| || || |
Sbjct 5094 CAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCTT 5153
Query 245343 CCATGCT 245349
| |||||
Sbjct 5154 CAATGCT 5160
>seq37228
Length=14314
Score = 150 bits (166), Expect = 3e-31
Identities = 241/343 (70%), Gaps = 11/343 (3%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | ||||| || |||||||||| |||| || ||
Sbjct 14297 GTTGACGACCTGGAACTCGCCGGCGAGCACACGACGCTGGTAGATGTTGGACGTGTAAGG 14238
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||||| || ||| ||||||| || ||||||| || || || || |||||||||| |||
Sbjct 14237 CTCGAAGCACTCGTTGTTGCCAAGGATCTGCGAGGTACTGGCCGTGGGCATGGGCGCCAC 14178
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269
|| |||||||| | |||||||| || ||| || | || ||| |||||||||
Sbjct 14177 GAGAAGACTGTTACGGACGCCGTGTTGCTTGATCTGGCTCTTCAGGTCGGCCCAGTCCCA 14118
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
| | | | ||| |||| | ||||||||| | || || | |||| |
Sbjct 14117 AAGGTCAGT-AGGC--------TTGACGTTCCACATGTCGTATTGAAGGATACCCTGGGA 14067
Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTC-T 244388
|||||| |||||| ||||| | |||||| || || ||| || ||||| || | |
Sbjct 14066 GACGGGCGAGCCCTCATAGGTGGAGTAGGGGCCTTCCTCCTGAGCGAGCTTGCATGACAT 14007
Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTT 244431
||| ||||| |||| |||||||||||| |||||| ||||||
Sbjct 14006 GGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTT 13965
>seq37272
Length=476240
Score = 122 bits (134), Expect = 2e-22
Identities = 227/327 (69%), Gaps = 11/327 (3%)
Strand=Plus/Minus
Query 42309 ATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA 42367
|||||||||||||| | || | || |||||||||||| |||||||| ||| |||||||
Sbjct 445986 ATGTACAAGAAGGCAGAAGCT-TCTTTCTGGACCGCCGAAGAGATTGATCTGTCCAAGGA 445928
Query 42368 CACGGCCGGCTGGGAGT-CACTGTC--TGAGAACGAAAAGTTTTTCCTCAAAAACATACT 42424
|| |||| | || || ||| | ||||||| ||| || | |||| ||
Sbjct 445927 TCTCCACGACTGGAACAACAAGATCAATGACGATGAAAAGTACTTCATCTCACACATCCT 445868
Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484
|||||||| ||||| || || ||||| ||||| |||||||| | | ||||
Sbjct 445867 TGCCTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTCGTTGAGCGCTTCAGTGC 445808
Query 42485 AGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544
||||| ||| ||||| || |||||||||||||||||||| || |||||| |
Sbjct 445807 CGAGGTCCAGGTTCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATGATGGAGAACAT 445748
Query 42545 GCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGCG 42601
||||||||| ||| | ||||||| |||| |||||| ||| || | | || |
Sbjct 445747 CCACTCTGAGACTTACTC---GCTGCTCATTGACACCTACATCAAGGAGCCTGCCCAGAG 445691
Query 42602 TAACGGGCTGTTCAAGGCCATGGAGAC 42628
| | || ||||| ||||| || ||
Sbjct 445690 GACCTATCTCTTCAATGCCATCGATAC 445664
>seq4446
Length=444291
Score = 114 bits (126), Expect = 2e-20
Identities = 223/326 (68%), Gaps = 9/326 (3%)
Strand=Plus/Minus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| || ||| |||||||||||| |||||||| || | |||||
Sbjct 123805 ATGTACAAGAAGGCAGAGGCTTCCTTCTGGACCGCCGAAGAGATTGATCTATCTAAGGAT 123746
Query 42369 ACGGCCGGCTGGGAGT-CACTGTC--TGAGAACGAAAAGTTTTTCCTCAAAAACATACTG 42425
|| |||| | || || ||| | ||||||| ||| || | |||| ||
Sbjct 123745 CTCCACGACTGGAACAACAAGATCAATGATGATGAAAAGTACTTCATCTCACACATCCTT 123686
Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485
|||||||| ||||| || || ||||| ||||| |||||||| | | ||||
Sbjct 123685 GCCTTCTTTGCCGCTTCAGATGGCATCGTCAACGAGAACCTCGTTGAGCGCTTCAGTGCC 123626
Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545
||||| ||| |||||| || |||||||||||||||||||| || |||||| |
Sbjct 123625 GAGGTCCAGGTTCCTGAGGCTCGATGCTTCTACGGCTTCCAGATTATGATGGAGAACATC 123566
Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGCGT 42602
||||| ||| ||| | ||||||| |||| |||||| || || | | || |
Sbjct 123565 CACTCCGAGACTTACTC---GCTGCTCATTGACACCTACATCAAAGAGCCTGCCCAGAGG 123509
Query 42603 AACGGGCTGTTCAAGGCCATGGAGAC 42628
| | || ||||| ||||| || ||
Sbjct 123508 ACCTATCTCTTCAATGCCATCGATAC 123483
>seq7069
Length=10009
Score = 102 bits (112), Expect = 2e-16
Identities = 111/145 (77%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGG 42780
||| ||||| ||||||||| || ||||||||||| ||||||||||||||| || |||
Sbjct 97 CGTTGAGGGTATCTTCTTCAGTGGTGCCTTCGCCTCAATCTTCTGGCTCAAGAAGCGAGG 156
Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840
|| ||||| || || || ||||| ||||| |||||| | |||||||| || || |
Sbjct 157 CCTC-ATGCCTGGCCTGACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACA 215
Query 42841 GGGACTTTGCCTGCCTCCTGTTCTC 42865
|| || || || || ||||||||
Sbjct 216 CTGATTTCGCTTGTCTGCTGTTCTC 240
>seq2280
Length=241
Score = 96.9 bits (106), Expect = 7e-15
Identities = 162/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 42399 GAAAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAAT 42458
||||||| ||| || | |||| || |||||||| ||||| || || ||||| |||||
Sbjct 238 GAAAAGTACTTCATCTCACACATCCTTGCCTTCTTTGCCGCTTCAGATGGCATCGTCAAC 179
Query 42459 GAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTAC 42518
|||||||| | | |||| ||||| ||| ||||| || |||||||||
Sbjct 178 GAGAACCTCGTTGAGCGCTTCAGTGCCGAGGTCCAGGTTCCCGAGGCTCGATGCTTCTAC 119
Query 42519 GGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---AC 42575
||||||||||| || |||||| | ||||||||| ||| | ||||||| ||
Sbjct 118 GGCTTCCAGATCATGATGGAGAACATCCACTCTGAGACTTACTC---GCTGCTCATTGAC 62
Query 42576 ACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628
|| |||||| ||| || | | || | | | || ||||| ||||| || ||
Sbjct 61 ACCTACATCAAGGAGCCTGCCCAGAGGACCTATCTCTTCAATGCCATCGATAC 9
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943886129660320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |