Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08-
07] 38,382 sequences; 100,520,033 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq669 107 2e-18
>seq669
Length=171934
Score = 107 bits (118), Expect = 2e-18
Identities = 199/292 (68%), Gaps = 0/292 (0%)
Strand=Plus/Plus
Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416
|| ||||| ||| |||| ||| |||||||| ||||||||| | || || |||||||
Sbjct 135416 ACGTAAAACTGAGCAAACATGTGGCAGGGCGGCAGCGCCATCTTCTTCAGGTGCGCCGGG 135475
Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476
||||| || | | ||||| | | ||||| |||||| | || | | |||||
Sbjct 135476 TTCCATGCGCTGAGGATGATGCGCCGATCGTACGGATTGGTCTTGAGCTTGTGGACAATC 135535
Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCC 20536
| | || ||||| | || || || || ||||| | | ||| || |||||| | ||
Sbjct 135536 TCTGCCAGCTGGTCGACACCTTGACCCGTGTAGTCCGTCTTCGCATCAACGTACTCGGCA 135595
Query 20537 CCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCC 20596
|| ||||||| ||| ||||| ||||| || || || | || || || | |||||
Sbjct 135596 CCGAAGTGCCGCCATTGGAAGCCGTAGACGGGACCGAGGTCGCCTACCTCGCGGTGCGAG 135655
Query 20597 AGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648
|| || | | | |||||||| | ||||| || |||||| |||||||
Sbjct 135656 AGTCCCACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGA 135707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441161040364880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |