Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08- 07] 38,382 sequences; 100,520,033 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq669 107 2e-18 >seq669 Length=171934 Score = 107 bits (118), Expect = 2e-18 Identities = 199/292 (68%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 || ||||| ||| |||| ||| |||||||| ||||||||| | || || ||||||| Sbjct 135416 ACGTAAAACTGAGCAAACATGTGGCAGGGCGGCAGCGCCATCTTCTTCAGGTGCGCCGGG 135475 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| || | | ||||| | | ||||| |||||| | || | | ||||| Sbjct 135476 TTCCATGCGCTGAGGATGATGCGCCGATCGTACGGATTGGTCTTGAGCTTGTGGACAATC 135535 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCC 20536 | | || ||||| | || || || || ||||| | | ||| || |||||| | || Sbjct 135536 TCTGCCAGCTGGTCGACACCTTGACCCGTGTAGTCCGTCTTCGCATCAACGTACTCGGCA 135595 Query 20537 CCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCC 20596 || ||||||| ||| ||||| ||||| || || || | || || || | ||||| Sbjct 135596 CCGAAGTGCCGCCATTGGAAGCCGTAGACGGGACCGAGGTCGCCTACCTCGCGGTGCGAG 135655 Query 20597 AGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648 || || | | | |||||||| | ||||| || |||||| ||||||| Sbjct 135656 AGTCCCACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGA 135707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441161040364880