Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08-
07] 38,382 sequences; 100,520,033 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq31797 181 1e-39
seq31830 147 3e-29
seq37128 145 9e-29
seq20446 145 9e-29
seq336 141 1e-27
seq28779 134 2e-25
seq32652 131 2e-24
seq6208 129 7e-24
seq31807 107 2e-17
seq37228 104 3e-16
seq4446 96.9 4e-14
seq36161 93.3 5e-13
seq11112 93.3 5e-13
seq81 93.3 5e-13
>seq31797
Length=34451
Score = 181 bits (200), Expect = 1e-39
Identities = 278/397 (70%), Gaps = 6/397 (2%)
Strand=Plus/Minus
Query 18092 CCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGT 18151
||| || |||||||| ||||| ||||||| ||| |||| || ||||| ||
Sbjct 30375 CCAGCTACGGCGAGTCCCACGGCAAATCCGTCGGCGTCATTGTCGATGGTGTGCCCCCTG 30316
Query 18152 GCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG 18211
|| | | || | |||| ||||||| ||||| ||| | || ||||| || ||||||
Sbjct 30315 GCCTCGCCCTCGACGAGTCCGACATTCAGCCCCAGCTTACACGTCGCCGGCCCGGCCAGT 30256
Query 18212 GCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGA 18271
|| | | || || ||||| ||| || ||||||| ||||||||| ||||| |||
Sbjct 30255 CTGCCATCACAACACCCCGCAATGAGAAGGACCGCGTCACCATCCAGTCCGGCACCGAGT 30196
Query 18272 ACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCG 18331
||| ||| || ||| | || | ||| | | ||| ||||| |||||||| |||
Sbjct 30195 TTGGCTACACCCTGGGCACACCGCTTGGCATGCTCGTGCCCAACGAGGACCAGCGCCCCA 30136
Query 18332 TCGACTATTCCGACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCT 18385
|| || | ||| | | || | ||||| ||||| |||||||||| ||||
Sbjct 30135 AGGATTACGGCAACAAGACGATGGACCGTTTCCCGCGTCCCTCGCACGCCGACTGGACCT 30076
Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGA 18445
|| | ||||||||||||||||||| || || || || ||||| || || || |||||||
Sbjct 30075 ACCTCACCAAGTACGGCATCAAGGCTTCCTCCGGAGGCGGCCGCTCCTCGGCGCGCGAGA 30016
Query 18446 CCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482
|| | ||||||||||||||||| || ||||| ||
Sbjct 30015 CCATTGCCCGCGTCGCCGCCGGCGCCGTTGCCGAAAA 29979
Score = 129 bits (142), Expect = 7e-24
Identities = 122/152 (80%), Gaps = 3/152 (2%)
Strand=Plus/Minus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGC 19112
||||||||||| || || ||||| ||| ||| || |||||||||||||| |||
Sbjct 29737 ATCGGCGGCACCGTCACCTGCGTCATCAAGAACCCGCCCGCCGGCCTCGGCGAGCCCTGC 29678
Query 19113 TTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGA 19172
|| |||||| |||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 29677 TTCGACAAGCTCGAGGCCCTGCTCGCCCACGCCATGCTCAGCATCCCGGCCACCAAGGGC 29618
Query 19173 TTCGAGATTGGCAGCGGG-TTTG-CGGGTGCG 19202
|||||||| || | |||| |||| ||| ||||
Sbjct 29617 TTCGAGATCGG-ATCGGGCTTTGCCGGCTGCG 29587
>seq31830
Length=311768
Score = 147 bits (162), Expect = 3e-29
Identities = 189/261 (72%), Gaps = 0/261 (0%)
Strand=Plus/Plus
Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121
|| |||||| |||||||||||||||| ||| |||||||| ||||||||| || ||||||
Sbjct 111379 GCCCTGGTCAACGTAGCGCGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTT 111438
Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181
|| |||||||||||| || | ||| | ||| | ||| || | || || |
Sbjct 111439 TGAAGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTGGCACGGATGCGATGGACGTTCAG 111498
Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241
|| || || || ||| ||||||||| | || || ||||| ||||||||||| ||
Sbjct 111499 ACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACC 111558
Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301
|| || ||| |||||||||| || || ||||| ||||| || | || | |||
Sbjct 111559 TTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCAGGACGACAGCTGAGCCTGAGGCGT 111618
Query 1630302 GCCGGCGTTGAAGAGCGTGGG 1630322
||| ||||||||||| || ||
Sbjct 111619 GCCAGCGTTGAAGAGGGTAGG 111639
Score = 107 bits (118), Expect = 2e-17
Identities = 320/499 (64%), Gaps = 14/499 (3%)
Strand=Plus/Plus
Query 1628109 GGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAAAACTGGAC 1628168
||||||||||| || |||||||| || || || ||| | ||| ||| |||
Sbjct 110890 GGGCAGGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCATCGGGTGCCGAGTACTCGAC 110949
Query 1628169 GATCTCGGTGCACAGGTTGG-CCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCA 1628227
||||| ||||||||||||| | || | ||||| ||||||| ||||||| | |
Sbjct 110950 AATCTCTGTGCACAGGTTGGAGCTGCG-AATGGTACCAAGGTTCTTCTGGTTGCTCTTGC 111008
Query 1628228 GGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGA 1628287
||||| | ||||||| ||||||| |||| |||||||||| |||| ||| ||| ||
Sbjct 111009 GGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGA 111068
Query 1628288 TGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCT------NNNNNN 1628341
||| |||| | || |||| | || || | ||||||||
Sbjct 111069 CGGCGTACCAAAGCTTCTGCGC---CTTGATGGT---CTTGCGGCCCTTGCCAGCCTTCT 111122
Query 1628342 NNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCT 1628401
||||| | | |||||||| || ||||| || ||
Sbjct 111123 CGTACTTCTCGTACAAGGCCTCAAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACT 111182
Query 1628402 CGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCAC 1628461
|| || || | ||| | ||||||||| || | | || ||| ||||| ||
Sbjct 111183 CGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGG 111242
Query 1628462 ACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTT 1628521
|||||| || ||||| ||||| || || |||||||||||||||||||||
Sbjct 111243 GGATCCACAAGGCCAGGAAGAGATCGCGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGC 111302
Query 1628522 TGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGC 1628581
|||||| || | |||| | || |||||||| ||||| |||||| |||||| ||||
Sbjct 111303 GGAGGTCAAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGCGC 111362
Query 1628582 CCTTGCGCTTGCCGCCGCC 1628600
| |||||| ||||||
Sbjct 111363 CGGGACGCTTGTTGCCGCC 111381
Score = 104 bits (114), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 1627320 CTTGACCAGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGAT 1627379
||||| ||| | ||||||| || || ||||| | |||||| || ||| ||||||
Sbjct 110314 CTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCGGCGAGCACACGACGCTGGTAGAT 110373
Query 1627380 GTTGTTGGTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGT 1627439
|||| ||| |||| | |||| ||||||| ||||||||||| || |||||||
Sbjct 110374 GTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGCGAGGTACTGGCCGT 110433
Query 1627440 GGGCATGAGCGCCACGAGGAGCGAGTTGCGCAGGCCGTGCTG-TCGAACTAGCGCGCGCA 1627498
||||||| |||||||||| || ||| || | |||||| || | || || || | ||
Sbjct 110434 GGGCATGGGCGCCACGAGAAGACTGTTACGGACGCCGTGTTGCTTGATCTGGCTC-TTCA 110492
Query 1627499 GCGCGTCCCAGTCCCA 1627514
| || ||||||||||
Sbjct 110493 GGTCGGCCCAGTCCCA 110508
>seq37128
Length=14570
Score = 145 bits (160), Expect = 9e-29
Identities = 317/464 (68%), Gaps = 12/464 (3%)
Strand=Plus/Minus
Query 1726694 GCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCC-ACGCTCCCGTCGGTGCCGTTCTTGAA 1726752
|| ||||||| | |||||| | || || |||| | | | ||||||||||||||||||||
Sbjct 14150 GCCGCGGCGCCGATGGCGTCAA-TGGCGACGCCGAGGTTGCCGTCGGTGCCGTTCTTGAA 14092
Query 1726753 GCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCG 1726812
||||| || | || || |||| || | ||||||||| | ||| |||||| |||||
Sbjct 14091 GCCGACGGGGAACGAGAGGCCCGAGGCGAGCTCGCGGTGGAGCTGCGACTCGGTGGTGCG 14032
Query 1726813 CGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAA-GGGGCCACCAGAGGACTGA 1726871
|||||| | |||||| || | | ||| || | | ||||| | | | | ||
Sbjct 14031 CGCGCCAATGGCGCCGACCGAGATAAAGTCGGCGAGGAACTGGGGCGAGATGGTGTC-GA 13973
Query 1726872 GAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGGCGGCGCG 1726931
| | |||| || | |||| | ||| || ||| ||||| || || ||||||
Sbjct 13972 GCATCTCGGACGCAATGGGCATGCCCTTGGC--CGT-GAGGTCGCGGAAGAGCTGGCGCG 13916
Query 1726932 ACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGC 1726991
|| | |||||| | | | || ||| | ||||| |||||||||| || ||||
Sbjct 13915 ACACGCGCAGGCCCTTGTTGATCTGGAACGTCGAGTCGATGTCGGGGTCGTTGATGAGGC 13856
Query 1726992 CCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACGCAAAGCG 1727051
||||||| || || |||||||| ||||| |||| |||||||||||||| | ||| ||
Sbjct 13855 CCTTCCAGCCCACCGTCGTGCGGGGCTTCTCGAGGTAGGCGCGCATGACGATGCAGAGGT 13796
Query 1727052 CGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGC-GTCGGCCATAGTCGACGACGGCC 1727110
| | | || ||| |||| |||||||| | ||| || || |||| | |
Sbjct 13795 CCTGGTTGAGACGGTCGGCGACA---GCGCGCAGCCTGTC-GCAGTACTCGAGCGCCGTG 13740
Query 1727111 GCCGGGTCGTGCGCCGAACACGGACCAACGATAACCAGCAGCCG 1727154
||||||||||| ||| || || || | ||| ||||| || ||
Sbjct 13739 GCCGGGTCGTGGATCGAGCAGGGGCCGATGATGACCAGGAGGCG 13696
>seq20446
Length=63150
Score = 145 bits (160), Expect = 9e-29
Identities = 317/464 (68%), Gaps = 12/464 (3%)
Strand=Plus/Minus
Query 1726694 GCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCC-ACGCTCCCGTCGGTGCCGTTCTTGAA 1726752
|| ||||||| | |||||| | || || |||| | | | ||||||||||||||||||||
Sbjct 31008 GCCGCGGCGCCGATGGCGTCAA-TGGCGACGCCGAGGTTGCCGTCGGTGCCGTTCTTGAA 30950
Query 1726753 GCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCG 1726812
||||| || | || || |||| || | ||||||||| | ||| |||||| |||||
Sbjct 30949 GCCGACGGGGAACGAGAGGCCCGAGGCGAGCTCGCGGTGGAGCTGCGACTCGGTGGTGCG 30890
Query 1726813 CGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAA-GGGGCCACCAGAGGACTGA 1726871
|||||| | |||||| || | | ||| || | | ||||| | | | | ||
Sbjct 30889 CGCGCCAATGGCGCCGACCGAGATAAAGTCGGCGAGGAACTGGGGCGAGATGGTGTC-GA 30831
Query 1726872 GAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGGCGGCGCG 1726931
| | |||| || | |||| | ||| || ||| ||||| || || ||||||
Sbjct 30830 GCATCTCGGACGCAATGGGCATGCCCTTGGC--CGT-GAGGTCGCGGAAGAGCTGGCGCG 30774
Query 1726932 ACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGC 1726991
|| | |||||| | | | || ||| | ||||| |||||||||| || ||||
Sbjct 30773 ACACGCGCAGGCCCTTGTTGATCTGGAACGTCGAGTCGATGTCGGGGTCGTTGATGAGGC 30714
Query 1726992 CCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACGCAAAGCG 1727051
||||||| || || |||||||| ||||| |||| |||||||||||||| | ||| ||
Sbjct 30713 CCTTCCAGCCCACCGTCGTGCGGGGCTTCTCGAGGTAGGCGCGCATGACGATGCAGAGGT 30654
Query 1727052 CGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGC-GTCGGCCATAGTCGACGACGGCC 1727110
| | | || ||| |||| |||||||| | ||| || || |||| | |
Sbjct 30653 CCTGGTTGAGACGGTCGGCGACA---GCGCGCAGCCTGTC-GCAGTACTCGAGCGCCGTG 30598
Query 1727111 GCCGGGTCGTGCGCCGAACACGGACCAACGATAACCAGCAGCCG 1727154
||||||||||| ||| || || || | ||| ||||| || ||
Sbjct 30597 GCCGGGTCGTGGATCGAGCAGGGGCCGATGATGACCAGGAGGCG 30554
>seq336
Length=177044
Score = 141 bits (156), Expect = 1e-27
Identities = 188/261 (72%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121
|| |||||| |||||||||||||||| ||| |||||||| ||||||||| || ||||||
Sbjct 110631 GCCCTGGTCAACGTAGCGCGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTT 110572
Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181
|| |||||||||||| || | ||| | ||| | ||| || | || || |
Sbjct 110571 TGAAGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTGGCACGGATGCGATGGACGTTCAG 110512
Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241
|| || || || ||| ||||||||| | || || ||||| ||||||||||| ||
Sbjct 110511 ACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACC 110452
Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301
|| || || |||||||||| || || ||||| ||||| || | || | |||
Sbjct 110451 TTCAATGCTATCATCCTTCATGTCGACCAGGAAGCAGGACGACAGCTGAGCCTGGGGCGT 110392
Query 1630302 GCCGGCGTTGAAGAGCGTGGG 1630322
||| ||||||||||| || ||
Sbjct 110391 GCCAGCGTTGAAGAGGGTAGG 110371
Score = 107 bits (118), Expect = 2e-17
Identities = 320/499 (64%), Gaps = 14/499 (3%)
Strand=Plus/Minus
Query 1628109 GGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAAAACTGGAC 1628168
||||||||||| || |||||||| || || || ||| | ||| ||| |||
Sbjct 111120 GGGCAGGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCATCGGGTGCCGAGTACTCGAC 111061
Query 1628169 GATCTCGGTGCACAGGTTGG-CCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCA 1628227
||||| ||||||||||||| | || | ||||| ||||||| ||||||| | |
Sbjct 111060 AATCTCTGTGCACAGGTTGGAGCTGCG-AATGGTACCAAGGTTCTTCTGGTTGCTCTTGC 111002
Query 1628228 GGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGA 1628287
||||| | ||||||| ||||||| |||| |||||||||| |||| ||| ||| ||
Sbjct 111001 GGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGA 110942
Query 1628288 TGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCT------NNNNNN 1628341
||| |||| | || |||| | || || | ||||||||
Sbjct 110941 CGGCGTACCAAAGCTTCTGCGC---CTTGATGGT---CTTGCGGCCCTTGCCAGCCTTCT 110888
Query 1628342 NNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCT 1628401
||||| | | |||||||| || ||||| || ||
Sbjct 110887 CGTACTTCTCGTACAAGGCCTCAAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACT 110828
Query 1628402 CGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCAC 1628461
|| || || | ||| | ||||||||| || | | || ||| ||||| ||
Sbjct 110827 CGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGG 110768
Query 1628462 ACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTT 1628521
|||||| || ||||| ||||| || || |||||||||||||||||||||
Sbjct 110767 GGATCCACAAGGCCAGGAAGAGATCGCGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGC 110708
Query 1628522 TGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGC 1628581
|||||| || | |||| | || |||||||| ||||| |||||| |||||| ||||
Sbjct 110707 GGAGGTCAAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGCGC 110648
Query 1628582 CCTTGCGCTTGCCGCCGCC 1628600
| |||||| ||||||
Sbjct 110647 CGGGACGCTTGTTGCCGCC 110629
>seq28779
Length=43027
Score = 134 bits (148), Expect = 2e-25
Identities = 94/107 (88%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| |||||||||| ||||||||||| || |||||| | || |||||| | || || |||
Sbjct 22316 GCCTCCAACTACCTTGACATCAAGCCCCTTCTCGATGTCGGCTGCAAGACCGTCGCGAAC 22375
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
|||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 22376 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACGTTCAACAT 22422
>seq32652
Length=2549
Score = 131 bits (144), Expect = 2e-24
Identities = 93/107 (87%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| | |||||||| ||||||||||| || |||||| | || |||||| | || || |||
Sbjct 430 GCCTCTAACTACCTTGACATCAAGCCCCTTCTCGATGTCGGCTGCAAGACCGTCGCGAAC 371
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
|||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 370 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACGTTCAACAT 324
>seq6208
Length=192
Score = 129 bits (142), Expect = 7e-24
Identities = 89/101 (88%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 1592192 AACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATC 1592251
|||||||| ||||||||||| || |||||| | || |||||| | || || |||||||||
Sbjct 192 AACTACCTTGACATCAAGCCCCTTCTCGATGTCGGCTGCAAGACCGTCGCGAACATGATC 133
Query 1592252 AAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
|||||||||||||||||||||||||||||||| || |||||
Sbjct 132 AAGGGCAAGTCGCCCGAGGAGATCCGCAAGACGTTCAACAT 92
>seq31807
Length=5160
Score = 107 bits (118), Expect = 2e-17
Identities = 320/499 (64%), Gaps = 14/499 (3%)
Strand=Plus/Plus
Query 1628109 GGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAAAACTGGAC 1628168
||||||||||| || |||||||| || || || ||| | ||| ||| |||
Sbjct 4483 GGGCAGGGCCAGAGAGGCCAGGTTGCAGACGGCAACCTCATCGGGTGCCGAGTACTCGAC 4542
Query 1628169 GATCTCGGTGCACAGGTTGG-CCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCA 1628227
||||| ||||||||||||| | || | ||||| ||||||| ||||||| | |
Sbjct 4543 AATCTCTGTGCACAGGTTGGAGCTGCG-AATGGTACCAAGGTTCTTCTGGTTGCTCTTGC 4601
Query 1628228 GGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGA 1628287
||||| | ||||||| ||||||| |||| |||||||||| |||| ||| ||| ||
Sbjct 4602 GGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGA 4661
Query 1628288 TGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCT------NNNNNN 1628341
||| |||| | || |||| | || || | ||||||||
Sbjct 4662 CGGCGTACCAAAGCTTCTGCGC---CTTGATGGT---CTTGCGGCCCTTGCCAGCCTTCT 4715
Query 1628342 NNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCT 1628401
||||| | | |||||||| || ||||| || ||
Sbjct 4716 CGTACTTCTCGTACAAGGCCTCAAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACT 4775
Query 1628402 CGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCAC 1628461
|| || || | ||| | ||||||||| || | | || ||| ||||| ||
Sbjct 4776 CGTTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCGG 4835
Query 1628462 ACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTT 1628521
|||||| || ||||| ||||| || || |||||||||||||||||||||
Sbjct 4836 GGATCCACAAGGCCAGGAAGAGATCGCGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGC 4895
Query 1628522 TGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGC 1628581
|||||| || | |||| | || |||||||| ||||| |||||| |||||| ||||
Sbjct 4896 GGAGGTCAAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAAGCGC 4955
Query 1628582 CCTTGCGCTTGCCGCCGCC 1628600
| |||||| ||||||
Sbjct 4956 CGGGACGCTTGTTGCCGCC 4974
Score = 105 bits (116), Expect = 8e-17
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121
|| |||||| |||||||||||||||| ||| |||||||| ||||||||| || ||||||
Sbjct 4972 GCCCTGGTCAACGTAGCGCGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTT 5031
Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181
|| |||||||||||| || | ||| | ||| | ||| || | || || |
Sbjct 5032 TGAAGTGCCGTTGGTGCCGGCAATGTAAGAGCCAGTGGCACGGATGCGATGGACGTTCAG 5091
Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241
|| || || || ||| ||||||||| | || || ||||| ||||||||||| ||
Sbjct 5092 ACCAATACCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACC 5151
Query 1630242 CTCGAT 1630247
|| ||
Sbjct 5152 TTCAAT 5157
>seq37228
Length=14314
Score = 104 bits (114), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 1627320 CTTGACCAGGTGGCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGAT 1627379
||||| ||| | ||||||| || || ||||| | |||||| || ||| ||||||
Sbjct 14312 CTTGAGCAGCCAGGGGTTGACGACCTGGAACTCGCCGGCGAGCACACGACGCTGGTAGAT 14253
Query 1627380 GTTGTTGGTGATGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGT 1627439
|||| ||| |||| | |||| ||||||| ||||||||||| || |||||||
Sbjct 14252 GTTGGACGTGTAAGGCTCGAAGCACTCGTTGTTGCCAAGGATCTGCGAGGTACTGGCCGT 14193
Query 1627440 GGGCATGAGCGCCACGAGGAGCGAGTTGCGCAGGCCGTGCTG-TCGAACTAGCGCGCGCA 1627498
||||||| |||||||||| || ||| || | |||||| || | || || || | ||
Sbjct 14192 GGGCATGGGCGCCACGAGAAGACTGTTACGGACGCCGTGTTGCTTGATCTGGCTC-TTCA 14134
Query 1627499 GCGCGTCCCAGTCCCA 1627514
| || ||||||||||
Sbjct 14133 GGTCGGCCCAGTCCCA 14118
>seq4446
Length=444291
Score = 96.9 bits (106), Expect = 4e-14
Identities = 164/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || | || ||| |||||| |||||||||||||| | || || ||
Sbjct 73157 GCCTTCTGGTAATCAGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAAATG 73216
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | || ||||||| | |||||| ||| || ||||| | ||
Sbjct 73217 TTCTCCATGAAGTCAAATGGGTTGGTTGCCTTGTAAACCTTCTCATTGCCGAGGGCGACG 73276
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| |||||||| || || ||||| |||||||| |||||| |||||||||||||
Sbjct 73277 AGGAGGCGGTCTGCAACGAACTCAATGTACTGCTTCATGAGAGTAGCGTTCATGCCGAGC 73336
Query 868871 AGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924
|| ||||| || || | ||| ||| ||||||| ||| || | ||| || |||
Sbjct 73337 AG-GCCACAGGGGAGAGCCTCAGTCAGGAACTCTTGCTCAATATTGACAGCATCG 73390
>seq36161
Length=497815
Score = 93.3 bits (102), Expect = 5e-13
Identities = 114/151 (75%), Gaps = 10/151 (7%)
Strand=Plus/Plus
Query 96654 GCCGAGAACCTCATGATCGTCGACCTGGTGCGCAACGACCTG-AGCGTGTGCTGCGCGCC 96712
|||||||||||||||||||||||||| ||||| |||||||| | | ||| |||| |||
Sbjct 421919 GCCGAGAACCTCATGATCGTCGACCTCGTGCGTCACGACCTGCACGGCGTG-TGCGGGCC 421977
Query 96713 CGGCAGCGTCGTCGTGCCGCCCGGCCGCCTGATG-GCGATTGAGACCTACGCCGCCGTGC 96771
|||| |||||| ||||||| | ||| ||| ||| | ||| |||||| | ||
Sbjct 421978 CGGCCGCGTCGCCGTGCCG------CACCTCATGCGCG-TCGAGGAGTACGCCTCTGTCT 422030
Query 96772 ACCAGATGGTGACCACCGTCGACGGCCTGCT 96802
|||||| | ||| |||||||| || |||
Sbjct 422031 TTCAGATGATCACCGTCGTCGACGCCCGGCT 422061
>seq11112
Length=720063
Score = 93.3 bits (102), Expect = 5e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 344182 GTGGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGACGAGGCC 344241
|| ||||||||||| || ||||||||||||||||||||||||||||| || |||
Sbjct 162710 GTCGCCTTCCCCACGGAAACCGTCTACGGCCTCGGCGCCGACGCCACCCGCTCCGCCGCC 162769
Query 344242 GTGCGGCGCATCTTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCACGT 344300
|| | |||||| | | ||||||||| |||||| ||||||| |||| | |||||
Sbjct 162770 GTCAAGGGCATCTACGCCGCCAAGGGCCGGCCCTCCGACAACCCCCTCATCATCCACGT 162828
>seq81
Length=11629
Score = 93.3 bits (102), Expect = 5e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 344182 GTGGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGACGAGGCC 344241
|| ||||||||||| |||||||| ||||||||||||||||||||||| || |||
Sbjct 4860 GTCGCCTTCCCCACGGAGACCGTGTACGGCCTCGGCGCCGACGCCACCCGCTCCGCCGCC 4801
Query 344242 GTGCGGCGCATCTTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCACGT 344300
|| | |||||| | | ||||||||| |||||| ||||||| |||| | |||||
Sbjct 4800 GTCAAGAGCATCTACGCCGCCAAGGGCCGGCCCTCCGACAACCCCCTCATCATCCACGT 4742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6103989393337094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |