Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08-
07] 38,382 sequences; 100,520,033 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq32817 134 1e-26
seq1113 84.2 2e-11
>seq32817
Length=24951
Score = 134 bits (148), Expect = 1e-26
Identities = 224/324 (69%), Gaps = 0/324 (0%)
Strand=Plus/Minus
Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370
||||| || ||||| ||||| | || | | || | ||| ||||||| |||||| ||
Sbjct 19834 GATGACGTCCGTCTCAGGGTTCTTGCACTTCTTGCAAAGCACGAACTTGCTGATGAAGCC 19775
Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
||||| | ||||| | ||| | ||||||| ||||||| ||| | || ||||
Sbjct 19774 GTCAAGGTGATCCTGCAGCTTGGGGCCATCGTGGGCACCGTTGATGATCCAACGATCGTC 19715
Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490
| || | | || || || || |||||| | ||||||||||| | ||||
Sbjct 19714 GGCGGGGTCAATGTTGGTCTGGGCACCGAGCTCGAAACCGAAGTACTTGATGAGGTAGGC 19655
Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550
| | || || | || | || ||||| || || |||||| ||||| |||||||||||
Sbjct 19654 GCCGGGGCGGGCCAGAGACTGGGCGACACTGGTCAGGTTGACAATGACGGTCTTGATGCC 19595
Query 34551 GTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC 34610
|||||||| || || | ||||| || |||| ||| ||||||||||||||| |||
Sbjct 19594 ATTGCCCTTGCCCTCAATCTTGGTCTGGAGGCGCTCCATCTTGTAGCGGTAGAACTGGTC 19535
Query 34611 CGCCACATTGCGGTTAACGTTCAC 34634
|| |||| ||| |||||| ||
Sbjct 19534 GGCGACATCGCGACGAACGTTGAC 19511
>seq1113
Length=471304
Score = 84.2 bits (92), Expect = 2e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 34521 GGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGAT 34580
|| || |||||| ||||| ||||||||||| |||||||| || || | ||||| ||
Sbjct 429090 GGTCAGGTTGACAATGACGGTCTTGATGCCATTGCCCTTGCCCTCAATCTTGGTCTGGAG 429031
Query 34581 GCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCAC 34634
||| ||| ||||||||||||||| ||| || |||| ||| |||||| ||
Sbjct 429030 ACGCTCCATCTTGTAGCGGTAGAACTGGTCGGCGACATCGCGACGAACGTTGAC 428977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412648480698326
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |