Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08- 07] 38,382 sequences; 100,520,033 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq669 123 3e-23 >seq669 Length=171934 Score = 123 bits (136), Expect = 3e-23 Identities = 206/290 (71%), Gaps = 6/290 (2%) Strand=Plus/Plus Query 147106 ACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164 ||||||||||| ||| | |||||||| |||||||||||||| ||||| ||| || Sbjct 135416 ACGTAAAACTGAGCAAAC-ATGTGGCAGGGCGGCAGCGCCATCTTCTTCAGGTGCGCCGG 135474 Query 147165 GTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAA 147223 |||||| || || | | |||| | || | || || |||| | || | || || Sbjct 135475 GTTCCATGCGCTGAGGATGATGCGCC-GATCGTACGGATTGGTCTTGAGCTTGTGGACAA 135533 Query 147224 CCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACCTG 147282 | ||||||||| || || || ||| ||||| ||| |||| || |||||| | Sbjct 135534 TCTCTGCCAGCTGGTCGACACCTTGACCCGTGTAGTCCGTCTTCGCA-TCAACGTACTCG 135592 Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 || || ||||||| ||| ||||||||||| || || || |||||||| || | |||| Sbjct 135593 GCACCGAAGTGCCGCCATTGGAAGCCGTAGACGGGACCGAGGTCGCCTACCTCGCGGTGC 135652 Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 |||| ||| | | | ||| |||||| | || |||| | |||||||||| Sbjct 135653 GAGAGTCCCACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGAT 135702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583208057044800