Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08-
07] 38,382 sequences; 100,520,033 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq336 141 1e-27
seq31830 138 2e-26
seq37272 131 2e-24
seq2280 131 2e-24
seq4446 118 2e-20
seq26657 109 8e-18
seq31807 107 3e-17
seq37228 100 4e-15
>seq336
Length=177044
Score = 141 bits (156), Expect = 1e-27
Identities = 188/261 (72%), Gaps = 0/261 (0%)
Strand=Plus/Plus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
|| || ||||| || || |||||||| | | ||| ||||| ||||| ||| | |||
Sbjct 110371 CCTACCCTCTTCAACGCTGGCACGCCCCAGGCTCAGCTGTCGTCCTGCTTCCTGGTCGAC 110430
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || || || ||||| ||||| |||||| || || | ||||||
Sbjct 110431 ATGAAGGATGATAGCATTGAAGGTATCTACGACACCCTCAAGACCTGTGCCATGATCTCC 110490
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| ||| || || || ||| | || || | || ||| | ||| | ||| |
Sbjct 110491 AAGATGGCTGGTGGTATTGGTCTGAACGTCCATCGCATCCGTGCCACTGGCTCTTACATT 110550
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
|| |||||||||||| || |||||| | ||||||||||||||| || ||| |||||
Sbjct 110551 GCCGGCACCAACGGCACTTCAAACGGCATCACGCCCATGCTTCGCGTCTTCAACAACACG 110610
Query 260165 GCGCGCTACGTCGACCAGTGC 260185
||||||||||| |||||| ||
Sbjct 110611 GCGCGCTACGTTGACCAGGGC 110631
Score = 107 bits (118), Expect = 3e-17
Identities = 327/503 (65%), Gaps = 16/503 (3%)
Strand=Plus/Plus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|||||| |||||| ||||| |||||| |||||| || || |||||||| || ||
Sbjct 110629 GGCGGCAACAAGCGTCCCGGCGCTTTTGCCATCTACCTTGAGCCATGGCACGCTGATGTC 110688
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
|| | | || |||||| |||||||||||||||| |||| || ||| |||
Sbjct 110689 TTCGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGA----GGAGGTTCG--CGCTCGC 110742
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967
|||||||| | | |||||| ||| || || ||| || | | || | ||
Sbjct 110743 GATCTCTTCCTGGCCTTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGC 110802
Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027
|||||| | ||| | ||||| |||| || ||||| || ||||| || | |
Sbjct 110803 GACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTGCTACGGTGACGAG 110862
Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084
||||| ||| | || ||| || |||| || | |
Sbjct 110863 TTTGAGGCCTTGTACGAGAAGTACGAGAAGGCTGGCAAGGGCCGCAAGACCATCAAGGC- 110921
Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144
||| || || | |||| ||| | ||| ||| || | ||||||||||| |||| ||||
Sbjct 110922 GCA-GA-AGCTTTGGTACGCCGTCCTCGAGGCTCAGACCGAGACCGGCAACCCCTTCATG 110979
Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAG 262202
|||||||||| | ||||| | ||||||||| ||||||| || |||| || |||
Sbjct 110980 CTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTCG-CAG 111038
Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262
||||||||||||| ||||| ||| ||| ||| | ||| |||| || ||||
Sbjct 111039 -CTCCAACCTGTGCACAGAGATTGTCGAGTACTCGGCACCCGATGAGGTTGCCGTCTGCA 111097
Query 262263 ACCTCTCGAGCGTGGCCCTGCCC 262285
|||| | |||||||||||
Sbjct 111098 ACCTGGCCTCTCTGGCCCTGCCC 111120
>seq31830
Length=311768
Score = 138 bits (152), Expect = 2e-26
Identities = 208/293 (71%), Gaps = 2/293 (1%)
Strand=Plus/Minus
Query 259894 CATGTCGCAGCAG-TTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952
|||||| ||||| || ||||| || | || || ||||| || || |||||||| |
Sbjct 111670 CATGTC-CAGCAAATTCTTCACACACGCATCTCCTACCCTCTTCAACGCTGGCACGCCTC 111612
Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012
| ||| ||||| ||||| ||| | |||||||||| || || || || ||||
Sbjct 111611 AGGCTCAGCTGTCGTCCTGCTTCCTGGTTGACATGAAGGATGACAGCATTGAAGGTATCT 111552
Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072
| ||||| |||||| || || | ||||||||| ||| || || || ||| | ||
Sbjct 111551 ACGACACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCTGAACG 111492
Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132
|| | || ||| | ||| | ||| | || |||||||||||| || ||||||
Sbjct 111491 TCCATCGCATCCGTGCCACTGGCTCTTACATTGCCGGCACCAACGGCACTTCAAACGGCA 111432
Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185
| ||||||||||||||| || ||| |||||||||||||||| |||||| ||
Sbjct 111431 TCACGCCCATGCTTCGCGTCTTCAACAACACGGCGCGCTACGTTGACCAGGGC 111379
Score = 107 bits (118), Expect = 3e-17
Identities = 327/503 (65%), Gaps = 16/503 (3%)
Strand=Plus/Minus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|||||| |||||| ||||| |||||| |||||| || || |||||||| || ||
Sbjct 111381 GGCGGCAACAAGCGTCCCGGCGCTTTTGCCATCTACCTTGAGCCATGGCACGCTGATGTC 111322
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
|| | | || |||||| |||||||||||||||| |||| || ||| |||
Sbjct 111321 TTCGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGA----GGAGGTTCG--CGCTCGC 111268
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967
|||||||| | | |||||| ||| || || ||| || | | || | ||
Sbjct 111267 GATCTCTTCCTGGCCTTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGC 111208
Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027
|||||| | ||| | ||||| |||| || ||||| || ||||| || | |
Sbjct 111207 GACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTGCTACGGTGACGAG 111148
Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084
||||| ||| | || ||| || |||| || | |
Sbjct 111147 TTTGAGGCCTTGTACGAGAAGTACGAGAAGGCTGGCAAGGGCCGCAAGACCATCAAGGC- 111089
Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144
||| || || | |||| ||| | ||| ||| || | ||||||||||| |||| ||||
Sbjct 111088 GCA-GA-AGCTTTGGTACGCCGTCCTCGAGGCTCAGACCGAGACCGGCAACCCCTTCATG 111031
Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAG 262202
|||||||||| | ||||| | ||||||||| ||||||| || |||| || |||
Sbjct 111030 CTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTCG-CAG 110972
Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262
||||||||||||| ||||| ||| ||| ||| | ||| |||| || ||||
Sbjct 110971 -CTCCAACCTGTGCACAGAGATTGTCGAGTACTCGGCACCCGATGAGGTTGCCGTCTGCA 110913
Query 262263 ACCTCTCGAGCGTGGCCCTGCCC 262285
|||| | |||||||||||
Sbjct 110912 ACCTGGCCTCTCTGGCCCTGCCC 110890
Score = 104 bits (114), Expect = 3e-16
Identities = 317/485 (65%), Gaps = 20/485 (4%)
Strand=Plus/Minus
Query 262936 CTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTC 262995
|||||||||| |||||||||||||| || ||||||||||| ||||||| |||| |||
Sbjct 110451 CTCGTGGCGCCCATGCCCACGGCCAGTACCTCGCAGATCCTTGGCAACAACGAGTGCTTC 110392
Query 262996 GAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTC 263055
||| |||| |||||||||| ||| || |||||| | ||||| || || |||
Sbjct 110391 GAGCCTTACACGTCCAACATCTACCAGCGTCGTGTGCTCGCCGGCGAGTTCCAGGTCGTC 110332
Query 263056 AACCGCCACCTGGTCAA-GCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGA 263114
|||| | ||| |||| | | || || | | || || ||| | | | |
Sbjct 110331 AACCCCTGGCTGCTCAAGGATCTTGTTGACATG-GGTCTTTGGTCTGATAGCATGAAGAA 110273
Query 263115 CCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGA 263174
|| ||||||| | | || || | ||| | | | || | || ||||
Sbjct 110272 TCGCATCATTGCCGAGAATGGTTCCATCCAGAACATCCCCAAC------ATTCCCGCCGA 110219
Query 263175 TCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATAT 263231
||||| | || | |||||| || |||||| | | | || ||| ||| | ||
Sbjct 110218 CGTCAAGTCCCTGTACAAGACTGTCTGGGAGATTTCTCAGCG---CACCGTTGTGCAGAT 110162
Query 263232 GGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGA 263291
||| ||||| || | ||| |||||||| |||||| | ||| | || | ||
Sbjct 110161 GGCTGCCGATCGTGGTGCCTTCATCGACCAGTCCCAGTCCTTGAACATTCACATGAAGGA 110102
Query 263292 CCCGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAA 263348
||| || || | || |||||| |||||| | | ||| | ||||||||
Sbjct 110101 CCCTACCATGGGCAAG---ATCACGAGCATGCACTTCGCCGGCTGGAAGCTTGGCCTCAA 110045
Query 263349 GACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGA 263408
||| ||||||||||| |||||||||| | | ||||| | | ||||||||||| || ||
Sbjct 110044 GACCGGCATGTACTACCTGCGCACCCAGGCTGCTGCTGCCCCTATTCAATTCACTGTTGA 109985
Query 263409 TCAGG 263413
| |||
Sbjct 109984 TAAGG 109980
>seq37272
Length=476240
Score = 131 bits (144), Expect = 2e-24
Identities = 165/223 (74%), Gaps = 3/223 (1%)
Strand=Plus/Minus
Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944
|||||| ||| |||| ||||| ||| ||||| ||||||||||| |||||||||
Sbjct 445884 TTCATCTCACACATCCTTGCCTTCTTT-GCCGCTTCAGATGGCATCGTCAACGAGAACCT 445826
Query 1455945 GGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCA 1456004
| | ||||| | |||||||| | || ||||| || | || ||||| |||||
Sbjct 445825 CGTTGAGCGCTTCAGTGCCGAGGTCCAGGTTCCCGAGGCTCGATGCTTCTACGGCTTCCA 445766
Query 1456005 GATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAA 1456064
|||| || || |||||||||||||| || |||||||| || || ||||||||| ||||
Sbjct 445765 GATCATGATGGAGAACATCCACTCTGAGACTTACTCGCTGCTCATTGACACCTACATCAA 445706
Query 1456065 GGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106
||| || | | || |||||| | ||||| |||||||| ||
Sbjct 445705 GGAGCCTGCCCAG-AGGACCTATCTCTTCAATGCCATCGATAC 445664
>seq2280
Length=241
Score = 131 bits (144), Expect = 2e-24
Identities = 165/223 (74%), Gaps = 3/223 (1%)
Strand=Plus/Minus
Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944
|||||| ||| |||| ||||| ||| ||||| ||||||||||| |||||||||
Sbjct 229 TTCATCTCACACATCCTTGCCTTCTTT-GCCGCTTCAGATGGCATCGTCAACGAGAACCT 171
Query 1455945 GGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCA 1456004
| | ||||| | |||||||| | || ||||| || | || ||||| |||||
Sbjct 170 CGTTGAGCGCTTCAGTGCCGAGGTCCAGGTTCCCGAGGCTCGATGCTTCTACGGCTTCCA 111
Query 1456005 GATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAA 1456064
|||| || || |||||||||||||| || |||||||| || || ||||||||| ||||
Sbjct 110 GATCATGATGGAGAACATCCACTCTGAGACTTACTCGCTGCTCATTGACACCTACATCAA 51
Query 1456065 GGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106
||| || | | || |||||| | ||||| |||||||| ||
Sbjct 50 GGAGCCTGCCCAG-AGGACCTATCTCTTCAATGCCATCGATAC 9
>seq4446
Length=444291
Score = 118 bits (130), Expect = 2e-20
Identities = 240/348 (69%), Gaps = 19/348 (5%)
Strand=Plus/Minus
Query 1455769 CCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGG 1455828
||| | ||| ||| |||||||| || ||||| ||||| ||||| ||||||||||| |||
Sbjct 123821 CCACCAGATTTGGCAAATGTAC-AAGAAGGCAGAGGCTTCCTTCTGGACCGCCGAAGAGA 123763
Query 1455829 TCGACCTC-----GGCGC----CGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGC 1455879
| || || || | |||| | | || | | | ||| || || ||
Sbjct 123762 TTGATCTATCTAAGGATCTCCACGACTGGAACAACAAGAT--CAATGAT-GATGAAAAGT 123706
Query 1455880 GCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAG 1455939
| |||||| ||| |||| ||||| ||| ||||| ||||||||||| ||||
Sbjct 123705 AC---TTCATCTCACACATCCTTGCCTTCTTT-GCCGCTTCAGATGGCATCGTCAACGAG 123650
Query 1455940 AACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGG 1455999
||||| | | ||||| | |||||||| | || ||||| || | || |||||
Sbjct 123649 AACCTCGTTGAGCGCTTCAGTGCCGAGGTCCAGGTTCCTGAGGCTCGATGCTTCTACGGC 123590
Query 1456000 TTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTAC 1456059
|||||||| || || ||||||||||| || || |||||||| || || |||||||||
Sbjct 123589 TTCCAGATTATGATGGAGAACATCCACTCCGAGACTTACTCGCTGCTCATTGACACCTAC 123530
Query 1456060 GTCAAGGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106
|||| || || | | || |||||| | ||||| |||||||| ||
Sbjct 123529 ATCAAAGAGCCTGCCCAG-AGGACCTATCTCTTCAATGCCATCGATAC 123483
Score = 89.7 bits (98), Expect = 7e-12
Identities = 172/246 (70%), Gaps = 6/246 (2%)
Strand=Plus/Minus
Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCG-GTGGCGCTCATCG 1456589
||| || ||| | || ||| ||||||| | | ||| | || || ||||| || |||
Sbjct 73390 CGATGCTGTCAATATTGAGCAAGAGTTCCTGACTGAGGCTCTCCCCTGTGGC-CTGCTCG 73332
Query 1456590 GCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGC 1456649
|||||||||| || |||||| ||||||||||| || || || |||||||| ||||
Sbjct 73331 GCATGAACGCTACT-CTCATGAAGCAGTACATTGAGTTC-GTTGCAGACCGCCTCCTCGT 73274
Query 1456650 GGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGA 1456709
|| |||||| | ||||| ||| | | ||||||| || | |||||| |
Sbjct 73273 CGCCCTCGGCAATG-AGAAGGTTTACAAGGCAACCAACCCATTTGACTTCATGGAGAACA 73215
Query 1456710 TCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACGCCAAGGCCG 1456768
| || || | |||||||||||||| |||||| || || || || ||| ||||| |
Sbjct 73214 TTTCTCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGCTGATTACCAGAAGGCTG 73155
Query 1456769 GCGTCA 1456774
| ||||
Sbjct 73154 GTGTCA 73149
>seq26657
Length=5241
Score = 109 bits (120), Expect = 8e-18
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906
||| ||| ||||| ||||| || | ||||||||||||| || || |||||| | ||
Sbjct 5141 CGACTTGCGCGTCCGTGAGTCGGCCGTAGCGCAGGATGGCGCATCGCGACTGCAGCGGCT 5082
Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966
|||||| | | ||| ||||||||| | ||| || || ||||| |||| | | |
Sbjct 5081 CGATGATCTTGTTGGACTGGTTGCAGGCGAAGGCGAAGCGGGTCGTGTTGGAGTAAATCT 5022
Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026
|||| || ||||| ||||| || || ||| || | | ||||||||| || ||||
Sbjct 5021 CCATCGTGCGGCGGAGAGCCTGCTGCGCGCCCGATGTCATACTGTCGGCCTCATCAAGGA 4962
Query 333027 TGATGATCTTGTGGCGCCCGTGCGGCAG 333054
||| || ||||||||| || || || ||
Sbjct 4961 TGACGAGCTTGTGGCGGCCCTGGGGGAG 4934
>seq31807
Length=5160
Score = 107 bits (118), Expect = 3e-17
Identities = 327/503 (65%), Gaps = 16/503 (3%)
Strand=Plus/Minus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|||||| |||||| ||||| |||||| |||||| || || |||||||| || ||
Sbjct 4974 GGCGGCAACAAGCGTCCCGGCGCTTTTGCCATCTACCTTGAGCCATGGCACGCTGATGTC 4915
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
|| | | || |||||| |||||||||||||||| |||| || ||| |||
Sbjct 4914 TTCGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGA----GGAGGTTCG--CGCTCGC 4861
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967
|||||||| | | |||||| ||| || || ||| || | | || | ||
Sbjct 4860 GATCTCTTCCTGGCCTTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGC 4801
Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027
|||||| | ||| | ||||| |||| || ||||| || ||||| || | |
Sbjct 4800 GACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTGCTACGGTGACGAG 4741
Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084
||||| ||| | || ||| || |||| || | |
Sbjct 4740 TTTGAGGCCTTGTACGAGAAGTACGAGAAGGCTGGCAAGGGCCGCAAGACCATCAAGGC- 4682
Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144
||| || || | |||| ||| | ||| ||| || | ||||||||||| |||| ||||
Sbjct 4681 GCA-GA-AGCTTTGGTACGCCGTCCTCGAGGCTCAGACCGAGACCGGCAACCCCTTCATG 4624
Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAG 262202
|||||||||| | ||||| | ||||||||| ||||||| || |||| || |||
Sbjct 4623 CTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTCG-CAG 4565
Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262
||||||||||||| ||||| ||| ||| ||| | ||| |||| || ||||
Sbjct 4564 -CTCCAACCTGTGCACAGAGATTGTCGAGTACTCGGCACCCGATGAGGTTGCCGTCTGCA 4506
Query 262263 ACCTCTCGAGCGTGGCCCTGCCC 262285
|||| | |||||||||||
Sbjct 4505 ACCTGGCCTCTCTGGCCCTGCCC 4483
Score = 105 bits (116), Expect = 1e-16
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 260000 ATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGC 260059
|| || || ||||| ||||| |||||| || || | ||||||||| ||| || ||
Sbjct 5157 ATTGAAGGTATCTACGACACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGT 5098
Query 260060 ATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGC 260119
|| ||| | || || | || ||| | ||| | ||| | || ||||||||||||
Sbjct 5097 ATTGGTCTGAACGTCCATCGCATCCGTGCCACTGGCTCTTACATTGCCGGCACCAACGGC 5038
Query 260120 CAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGAC 260179
|| |||||| | ||||||||||||||| || ||| |||||||||||||||| |||
Sbjct 5037 ACTTCAAACGGCATCACGCCCATGCTTCGCGTCTTCAACAACACGGCGCGCTACGTTGAC 4978
Query 260180 CAGTGC 260185
||| ||
Sbjct 4977 CAGGGC 4972
>seq37228
Length=14314
Score = 100 bits (110), Expect = 4e-15
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 262936 CTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTC 262995
|||||||||| |||||||||||||| || ||||||||||| ||||||| |||| |||
Sbjct 14175 CTCGTGGCGCCCATGCCCACGGCCAGTACCTCGCAGATCCTTGGCAACAACGAGTGCTTC 14234
Query 262996 GAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTC 263055
||| |||| |||||||||| ||| || |||||| | ||||| || || |||
Sbjct 14235 GAGCCTTACACGTCCAACATCTACCAGCGTCGTGTGCTCGCCGGCGAGTTCCAGGTCGTC 14294
Query 263056 AACCGCCACCTGGTCAAG 263073
|||| | ||| |||||
Sbjct 14295 AACCCCTGGCTGCTCAAG 14312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7174109185553884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |