Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08- 07] 38,382 sequences; 100,520,033 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq336 141 1e-27 seq31830 138 2e-26 seq37272 131 2e-24 seq2280 131 2e-24 seq4446 118 2e-20 seq26657 109 8e-18 seq31807 107 3e-17 seq37228 100 4e-15 >seq336 Length=177044 Score = 141 bits (156), Expect = 1e-27 Identities = 188/261 (72%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || || ||||| || || |||||||| | | ||| ||||| ||||| ||| | ||| Sbjct 110371 CCTACCCTCTTCAACGCTGGCACGCCCCAGGCTCAGCTGTCGTCCTGCTTCCTGGTCGAC 110430 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || || || ||||| ||||| |||||| || || | |||||| Sbjct 110431 ATGAAGGATGATAGCATTGAAGGTATCTACGACACCCTCAAGACCTGTGCCATGATCTCC 110490 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| ||| || || || ||| | || || | || ||| | ||| | ||| | Sbjct 110491 AAGATGGCTGGTGGTATTGGTCTGAACGTCCATCGCATCCGTGCCACTGGCTCTTACATT 110550 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || |||||||||||| || |||||| | ||||||||||||||| || ||| ||||| Sbjct 110551 GCCGGCACCAACGGCACTTCAAACGGCATCACGCCCATGCTTCGCGTCTTCAACAACACG 110610 Query 260165 GCGCGCTACGTCGACCAGTGC 260185 ||||||||||| |||||| || Sbjct 110611 GCGCGCTACGTTGACCAGGGC 110631 Score = 107 bits (118), Expect = 3e-17 Identities = 327/503 (65%), Gaps = 16/503 (3%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||| |||||| ||||| |||||| |||||| || || |||||||| || || Sbjct 110629 GGCGGCAACAAGCGTCCCGGCGCTTTTGCCATCTACCTTGAGCCATGGCACGCTGATGTC 110688 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | || |||||| |||||||||||||||| |||| || ||| ||| Sbjct 110689 TTCGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGA----GGAGGTTCG--CGCTCGC 110742 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 |||||||| | | |||||| ||| || || ||| || | | || | || Sbjct 110743 GATCTCTTCCTGGCCTTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGC 110802 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||| | ||| | ||||| |||| || ||||| || ||||| || | | Sbjct 110803 GACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTGCTACGGTGACGAG 110862 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084 ||||| ||| | || ||| || |||| || | | Sbjct 110863 TTTGAGGCCTTGTACGAGAAGTACGAGAAGGCTGGCAAGGGCCGCAAGACCATCAAGGC- 110921 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 ||| || || | |||| ||| | ||| ||| || | ||||||||||| |||| |||| Sbjct 110922 GCA-GA-AGCTTTGGTACGCCGTCCTCGAGGCTCAGACCGAGACCGGCAACCCCTTCATG 110979 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAG 262202 |||||||||| | ||||| | ||||||||| ||||||| || |||| || ||| Sbjct 110980 CTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTCG-CAG 111038 Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262 ||||||||||||| ||||| ||| ||| ||| | ||| |||| || |||| Sbjct 111039 -CTCCAACCTGTGCACAGAGATTGTCGAGTACTCGGCACCCGATGAGGTTGCCGTCTGCA 111097 Query 262263 ACCTCTCGAGCGTGGCCCTGCCC 262285 |||| | ||||||||||| Sbjct 111098 ACCTGGCCTCTCTGGCCCTGCCC 111120 >seq31830 Length=311768 Score = 138 bits (152), Expect = 2e-26 Identities = 208/293 (71%), Gaps = 2/293 (1%) Strand=Plus/Minus Query 259894 CATGTCGCAGCAG-TTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952 |||||| ||||| || ||||| || | || || ||||| || || |||||||| | Sbjct 111670 CATGTC-CAGCAAATTCTTCACACACGCATCTCCTACCCTCTTCAACGCTGGCACGCCTC 111612 Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012 | ||| ||||| ||||| ||| | |||||||||| || || || || |||| Sbjct 111611 AGGCTCAGCTGTCGTCCTGCTTCCTGGTTGACATGAAGGATGACAGCATTGAAGGTATCT 111552 Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 | ||||| |||||| || || | ||||||||| ||| || || || ||| | || Sbjct 111551 ACGACACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTCTGAACG 111492 Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132 || | || ||| | ||| | ||| | || |||||||||||| || |||||| Sbjct 111491 TCCATCGCATCCGTGCCACTGGCTCTTACATTGCCGGCACCAACGGCACTTCAAACGGCA 111432 Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 | ||||||||||||||| || ||| |||||||||||||||| |||||| || Sbjct 111431 TCACGCCCATGCTTCGCGTCTTCAACAACACGGCGCGCTACGTTGACCAGGGC 111379 Score = 107 bits (118), Expect = 3e-17 Identities = 327/503 (65%), Gaps = 16/503 (3%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||| |||||| ||||| |||||| |||||| || || |||||||| || || Sbjct 111381 GGCGGCAACAAGCGTCCCGGCGCTTTTGCCATCTACCTTGAGCCATGGCACGCTGATGTC 111322 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | || |||||| |||||||||||||||| |||| || ||| ||| Sbjct 111321 TTCGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGA----GGAGGTTCG--CGCTCGC 111268 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 |||||||| | | |||||| ||| || || ||| || | | || | || Sbjct 111267 GATCTCTTCCTGGCCTTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGC 111208 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||| | ||| | ||||| |||| || ||||| || ||||| || | | Sbjct 111207 GACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTGCTACGGTGACGAG 111148 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084 ||||| ||| | || ||| || |||| || | | Sbjct 111147 TTTGAGGCCTTGTACGAGAAGTACGAGAAGGCTGGCAAGGGCCGCAAGACCATCAAGGC- 111089 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 ||| || || | |||| ||| | ||| ||| || | ||||||||||| |||| |||| Sbjct 111088 GCA-GA-AGCTTTGGTACGCCGTCCTCGAGGCTCAGACCGAGACCGGCAACCCCTTCATG 111031 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAG 262202 |||||||||| | ||||| | ||||||||| ||||||| || |||| || ||| Sbjct 111030 CTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTCG-CAG 110972 Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262 ||||||||||||| ||||| ||| ||| ||| | ||| |||| || |||| Sbjct 110971 -CTCCAACCTGTGCACAGAGATTGTCGAGTACTCGGCACCCGATGAGGTTGCCGTCTGCA 110913 Query 262263 ACCTCTCGAGCGTGGCCCTGCCC 262285 |||| | ||||||||||| Sbjct 110912 ACCTGGCCTCTCTGGCCCTGCCC 110890 Score = 104 bits (114), Expect = 3e-16 Identities = 317/485 (65%), Gaps = 20/485 (4%) Strand=Plus/Minus Query 262936 CTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTC 262995 |||||||||| |||||||||||||| || ||||||||||| ||||||| |||| ||| Sbjct 110451 CTCGTGGCGCCCATGCCCACGGCCAGTACCTCGCAGATCCTTGGCAACAACGAGTGCTTC 110392 Query 262996 GAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTC 263055 ||| |||| |||||||||| ||| || |||||| | ||||| || || ||| Sbjct 110391 GAGCCTTACACGTCCAACATCTACCAGCGTCGTGTGCTCGCCGGCGAGTTCCAGGTCGTC 110332 Query 263056 AACCGCCACCTGGTCAA-GCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGA 263114 |||| | ||| |||| | | || || | | || || ||| | | | | Sbjct 110331 AACCCCTGGCTGCTCAAGGATCTTGTTGACATG-GGTCTTTGGTCTGATAGCATGAAGAA 110273 Query 263115 CCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGA 263174 || ||||||| | | || || | ||| | | | || | || |||| Sbjct 110272 TCGCATCATTGCCGAGAATGGTTCCATCCAGAACATCCCCAAC------ATTCCCGCCGA 110219 Query 263175 TCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATAT 263231 ||||| | || | |||||| || |||||| | | | || ||| ||| | || Sbjct 110218 CGTCAAGTCCCTGTACAAGACTGTCTGGGAGATTTCTCAGCG---CACCGTTGTGCAGAT 110162 Query 263232 GGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGA 263291 ||| ||||| || | ||| |||||||| |||||| | ||| | || | || Sbjct 110161 GGCTGCCGATCGTGGTGCCTTCATCGACCAGTCCCAGTCCTTGAACATTCACATGAAGGA 110102 Query 263292 CCCGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAA 263348 ||| || || | || |||||| |||||| | | ||| | |||||||| Sbjct 110101 CCCTACCATGGGCAAG---ATCACGAGCATGCACTTCGCCGGCTGGAAGCTTGGCCTCAA 110045 Query 263349 GACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGA 263408 ||| ||||||||||| |||||||||| | | ||||| | | ||||||||||| || || Sbjct 110044 GACCGGCATGTACTACCTGCGCACCCAGGCTGCTGCTGCCCCTATTCAATTCACTGTTGA 109985 Query 263409 TCAGG 263413 | ||| Sbjct 109984 TAAGG 109980 >seq37272 Length=476240 Score = 131 bits (144), Expect = 2e-24 Identities = 165/223 (74%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944 |||||| ||| |||| ||||| ||| ||||| ||||||||||| ||||||||| Sbjct 445884 TTCATCTCACACATCCTTGCCTTCTTT-GCCGCTTCAGATGGCATCGTCAACGAGAACCT 445826 Query 1455945 GGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCA 1456004 | | ||||| | |||||||| | || ||||| || | || ||||| ||||| Sbjct 445825 CGTTGAGCGCTTCAGTGCCGAGGTCCAGGTTCCCGAGGCTCGATGCTTCTACGGCTTCCA 445766 Query 1456005 GATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAA 1456064 |||| || || |||||||||||||| || |||||||| || || ||||||||| |||| Sbjct 445765 GATCATGATGGAGAACATCCACTCTGAGACTTACTCGCTGCTCATTGACACCTACATCAA 445706 Query 1456065 GGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106 ||| || | | || |||||| | ||||| |||||||| || Sbjct 445705 GGAGCCTGCCCAG-AGGACCTATCTCTTCAATGCCATCGATAC 445664 >seq2280 Length=241 Score = 131 bits (144), Expect = 2e-24 Identities = 165/223 (74%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944 |||||| ||| |||| ||||| ||| ||||| ||||||||||| ||||||||| Sbjct 229 TTCATCTCACACATCCTTGCCTTCTTT-GCCGCTTCAGATGGCATCGTCAACGAGAACCT 171 Query 1455945 GGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCA 1456004 | | ||||| | |||||||| | || ||||| || | || ||||| ||||| Sbjct 170 CGTTGAGCGCTTCAGTGCCGAGGTCCAGGTTCCCGAGGCTCGATGCTTCTACGGCTTCCA 111 Query 1456005 GATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAA 1456064 |||| || || |||||||||||||| || |||||||| || || ||||||||| |||| Sbjct 110 GATCATGATGGAGAACATCCACTCTGAGACTTACTCGCTGCTCATTGACACCTACATCAA 51 Query 1456065 GGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106 ||| || | | || |||||| | ||||| |||||||| || Sbjct 50 GGAGCCTGCCCAG-AGGACCTATCTCTTCAATGCCATCGATAC 9 >seq4446 Length=444291 Score = 118 bits (130), Expect = 2e-20 Identities = 240/348 (69%), Gaps = 19/348 (5%) Strand=Plus/Minus Query 1455769 CCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGG 1455828 ||| | ||| ||| |||||||| || ||||| ||||| ||||| ||||||||||| ||| Sbjct 123821 CCACCAGATTTGGCAAATGTAC-AAGAAGGCAGAGGCTTCCTTCTGGACCGCCGAAGAGA 123763 Query 1455829 TCGACCTC-----GGCGC----CGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGC 1455879 | || || || | |||| | | || | | | ||| || || || Sbjct 123762 TTGATCTATCTAAGGATCTCCACGACTGGAACAACAAGAT--CAATGAT-GATGAAAAGT 123706 Query 1455880 GCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAG 1455939 | |||||| ||| |||| ||||| ||| ||||| ||||||||||| |||| Sbjct 123705 AC---TTCATCTCACACATCCTTGCCTTCTTT-GCCGCTTCAGATGGCATCGTCAACGAG 123650 Query 1455940 AACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGG 1455999 ||||| | | ||||| | |||||||| | || ||||| || | || ||||| Sbjct 123649 AACCTCGTTGAGCGCTTCAGTGCCGAGGTCCAGGTTCCTGAGGCTCGATGCTTCTACGGC 123590 Query 1456000 TTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTAC 1456059 |||||||| || || ||||||||||| || || |||||||| || || ||||||||| Sbjct 123589 TTCCAGATTATGATGGAGAACATCCACTCCGAGACTTACTCGCTGCTCATTGACACCTAC 123530 Query 1456060 GTCAAGGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106 |||| || || | | || |||||| | ||||| |||||||| || Sbjct 123529 ATCAAAGAGCCTGCCCAG-AGGACCTATCTCTTCAATGCCATCGATAC 123483 Score = 89.7 bits (98), Expect = 7e-12 Identities = 172/246 (70%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCG-GTGGCGCTCATCG 1456589 ||| || ||| | || ||| ||||||| | | ||| | || || ||||| || ||| Sbjct 73390 CGATGCTGTCAATATTGAGCAAGAGTTCCTGACTGAGGCTCTCCCCTGTGGC-CTGCTCG 73332 Query 1456590 GCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGC 1456649 |||||||||| || |||||| ||||||||||| || || || |||||||| |||| Sbjct 73331 GCATGAACGCTACT-CTCATGAAGCAGTACATTGAGTTC-GTTGCAGACCGCCTCCTCGT 73274 Query 1456650 GGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGA 1456709 || |||||| | ||||| ||| | | ||||||| || | |||||| | Sbjct 73273 CGCCCTCGGCAATG-AGAAGGTTTACAAGGCAACCAACCCATTTGACTTCATGGAGAACA 73215 Query 1456710 TCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACGCCAAGGCCG 1456768 | || || | |||||||||||||| |||||| || || || || ||| ||||| | Sbjct 73214 TTTCTCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGCTGATTACCAGAAGGCTG 73155 Query 1456769 GCGTCA 1456774 | |||| Sbjct 73154 GTGTCA 73149 >seq26657 Length=5241 Score = 109 bits (120), Expect = 8e-18 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906 ||| ||| ||||| ||||| || | ||||||||||||| || || |||||| | || Sbjct 5141 CGACTTGCGCGTCCGTGAGTCGGCCGTAGCGCAGGATGGCGCATCGCGACTGCAGCGGCT 5082 Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966 |||||| | | ||| ||||||||| | ||| || || ||||| |||| | | | Sbjct 5081 CGATGATCTTGTTGGACTGGTTGCAGGCGAAGGCGAAGCGGGTCGTGTTGGAGTAAATCT 5022 Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026 |||| || ||||| ||||| || || ||| || | | ||||||||| || |||| Sbjct 5021 CCATCGTGCGGCGGAGAGCCTGCTGCGCGCCCGATGTCATACTGTCGGCCTCATCAAGGA 4962 Query 333027 TGATGATCTTGTGGCGCCCGTGCGGCAG 333054 ||| || ||||||||| || || || || Sbjct 4961 TGACGAGCTTGTGGCGGCCCTGGGGGAG 4934 >seq31807 Length=5160 Score = 107 bits (118), Expect = 3e-17 Identities = 327/503 (65%), Gaps = 16/503 (3%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||| |||||| ||||| |||||| |||||| || || |||||||| || || Sbjct 4974 GGCGGCAACAAGCGTCCCGGCGCTTTTGCCATCTACCTTGAGCCATGGCACGCTGATGTC 4915 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | || |||||| |||||||||||||||| |||| || ||| ||| Sbjct 4914 TTCGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGA----GGAGGTTCG--CGCTCGC 4861 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 |||||||| | | |||||| ||| || || ||| || | | || | || Sbjct 4860 GATCTCTTCCTGGCCTTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGC 4801 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||| | ||| | ||||| |||| || ||||| || ||||| || | | Sbjct 4800 GACTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTGCTACGGTGACGAG 4741 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084 ||||| ||| | || ||| || |||| || | | Sbjct 4740 TTTGAGGCCTTGTACGAGAAGTACGAGAAGGCTGGCAAGGGCCGCAAGACCATCAAGGC- 4682 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 ||| || || | |||| ||| | ||| ||| || | ||||||||||| |||| |||| Sbjct 4681 GCA-GA-AGCTTTGGTACGCCGTCCTCGAGGCTCAGACCGAGACCGGCAACCCCTTCATG 4624 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAG 262202 |||||||||| | ||||| | ||||||||| ||||||| || |||| || ||| Sbjct 4623 CTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTCG-CAG 4565 Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262 ||||||||||||| ||||| ||| ||| ||| | ||| |||| || |||| Sbjct 4564 -CTCCAACCTGTGCACAGAGATTGTCGAGTACTCGGCACCCGATGAGGTTGCCGTCTGCA 4506 Query 262263 ACCTCTCGAGCGTGGCCCTGCCC 262285 |||| | ||||||||||| Sbjct 4505 ACCTGGCCTCTCTGGCCCTGCCC 4483 Score = 105 bits (116), Expect = 1e-16 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 260000 ATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGC 260059 || || || ||||| ||||| |||||| || || | ||||||||| ||| || || Sbjct 5157 ATTGAAGGTATCTACGACACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGT 5098 Query 260060 ATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGC 260119 || ||| | || || | || ||| | ||| | ||| | || |||||||||||| Sbjct 5097 ATTGGTCTGAACGTCCATCGCATCCGTGCCACTGGCTCTTACATTGCCGGCACCAACGGC 5038 Query 260120 CAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGAC 260179 || |||||| | ||||||||||||||| || ||| |||||||||||||||| ||| Sbjct 5037 ACTTCAAACGGCATCACGCCCATGCTTCGCGTCTTCAACAACACGGCGCGCTACGTTGAC 4978 Query 260180 CAGTGC 260185 ||| || Sbjct 4977 CAGGGC 4972 >seq37228 Length=14314 Score = 100 bits (110), Expect = 4e-15 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 262936 CTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTC 262995 |||||||||| |||||||||||||| || ||||||||||| ||||||| |||| ||| Sbjct 14175 CTCGTGGCGCCCATGCCCACGGCCAGTACCTCGCAGATCCTTGGCAACAACGAGTGCTTC 14234 Query 262996 GAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTC 263055 ||| |||| |||||||||| ||| || |||||| | ||||| || || ||| Sbjct 14235 GAGCCTTACACGTCCAACATCTACCAGCGTCGTGTGCTCGCCGGCGAGTTCCAGGTCGTC 14294 Query 263056 AACCGCCACCTGGTCAAG 263073 |||| | ||| ||||| Sbjct 14295 AACCCCTGGCTGCTCAAG 14312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7174109185553884