Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Verticillium_20longisporum_20[genbank_20GCA_5F001268165.1_202015-08- 07] 38,382 sequences; 100,520,033 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4446 102 1e-16 >seq4446 Length=444291 Score = 102 bits (112), Expect = 1e-16 Identities = 178/257 (69%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || || |||||||| || ||| ||||| || ||||| || |||| || |||| || Sbjct 123558 TCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGAACC 123617 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || ||||| | || || | || | | || || || || || ||||| ||||||| Sbjct 123618 TGGACCTCGGCACTGAAGCGCTCAACGAGGTTCTCGTTGACGATGCCATCTGAAGCGGCA 123677 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGG--TG-TCAATTTATTCCAG 40090 || || || | | ||| || || || |||||||| || || || |||||| Sbjct 123678 AAGAAGGCAAGGATGTGTGAGATGAAGTACTTTTCATCATCATTGATCTTGTTGTTCCAG 123737 Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTT 40150 || | || ||| || |||| ||| | ||||| || ||||| || || ||||||||||| Sbjct 123738 TCGTGGAGATCCTTAGATAGATCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCTGCCTTC 123797 Query 40151 TTGTACATGTTCCATAT 40167 |||||||| | ||| || Sbjct 123798 TTGTACATTTGCCAAAT 123814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686579238330480