Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq283 170 2e-37 >seq283 Length=1466191 Score = 170 bits (188), Expect = 2e-37 Identities = 578/896 (65%), Gaps = 6/896 (1%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 |||||||| || || |||||| |||| ||||| || | |||||| | | | | Sbjct 590703 TCAAACTCATCGCCGTAAACATCTGCCAAACCAGGTGCCTCGTTCGGACAGAAAAGGGTC 590644 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || || |||| || || ||||||||||| | || ||| |||| ||||| || Sbjct 590643 CAATCACCGTTCGACTCAACGCGTTTCATAAACAAGTCTGGAGTCCAGAGAGCGTAGAAC 590584 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 | ||| | | |||| |||||| || || ||||| ||| || | |||| | | | Sbjct 590583 AAATCACGAGCTCTAACTTCCTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAA 590524 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 | ||| || ||||| || ||||| || |||| | | | || || || || || ||||| Sbjct 590523 ACATCGGAGTGCCATGGCTCCAAATAGATGGCAAAAGCACCTGGGCGCTTATTACCTCCT 590464 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 || |||| || || || ||||| ||||| || | | ||| || | ||| ||||| || Sbjct 590463 TGGTCTACATACCTCGCAGTGTTGTTATAGACGCGGAGCATGGGGACAATTCCATTAGAA 590404 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGAC 54308 | ||| ||||| || ||| ||| || | |||||||| | | ||| |||| Sbjct 590403 GAACCGTTGGTGCCACCGATGTAGGAGCCTGTAGCACGAATTCTGTGGACGTTG--AGAC 590346 Query 54309 CTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 54368 | || || || ||| | || ||||| | |||||| |||||||| ||||||||||| | Sbjct 590345 CGATGCCACCGGCCGTCTTGGAGATCATTGCGCAAGTCTTTAACGTGTCATAGATGCCTT 590286 Query 54369 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 54428 | || ||||| || |||| | | || ||||| | | |||| | ||| | Sbjct 590285 CAATGCTATCCGCCTTCATATCGACCAGGAAACAAGAGGCTAATTGGGCCTGCGGAGTAC 590226 Query 54429 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 54488 | || |||||||| || || ||||| || || || | || | ||| | | | || | Sbjct 590225 CAGCGTTAAATAATGTCGGCGAAGCATGTGTGAAGTACTTCTGAGACATCAAGTGATAAG 590166 Query 54489 TCTCGATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATG 54547 | ||||| ||| || || || || | || || || || || || ||||| | |||| Sbjct 590165 TTTCGATGGCTTTTTCAATGTCTTCACCG-TGTATGCCAACGGCAACCCGCATCAGCATG 590107 Query 54548 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTT 54607 || || || | ||| | | ||| || || || | ||| || || | || Sbjct 590106 TGTTGTGGACGTTCCGCAACCTTCCCATTAATCCGTAGGAGGTATGACCGCTCAAGCGTC 590047 Query 54608 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTA 54667 |||||||| || |||| || ||||| || || || | ||| | ||||| |||| | Sbjct 590046 TTAAAACCGAAGAAGTTATAGTTGAAGTCACGATCATACACGATAGCAGAGTTAAGTTCA 589987 Query 54668 TCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCA 54727 || || ||| | || | || || | || || || || | || | Sbjct 589986 CCCGCATGTTTCATGACAATTTCGTAAGTTTGATCCGATATCATAGGTGCTGCTTGATTA 589927 Query 54728 TTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTT 54787 || || ||||| ||| ||| | |||||||| || || |||| | || || ||| Sbjct 589926 TTCTTCGGATTAACAAAGTGATATAAATCCGATATGACCAAGGAAAATTGCTTCTTCGTT 589867 Query 54788 TCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 | ||||| || || || ||||| || | || || || ||||| || || || || Sbjct 589866 TGCTTGTGAAGGTTGGAAACGGCAATACGGGCAGCGAGGATGGCGTAGTCTGGGTG 589811 Score = 86.0 bits (94), Expect = 7e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190 ||| || || || || ||| ||||| ||||| | || | ||||| || || || Sbjct 249257 CAAGCAAGCAAAGTCAGTGTGGAGACCTTCGTCACGCGAGATCAGCTCGTTAGAGAAGGT 249198 Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250 || || ||||| || || ||||| || ||||| || || || || || || |||||||| Sbjct 249197 AAGGCCTGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGATGCGAAAGACCCAGAAAA 249138 Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTC 24285 ||| || || || || || |||||||||| ||||| Sbjct 249137 GAAGATACCCTCAACAGCTGCAAAGGCAACAAGTC 249103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593717354890560