Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq406 91.5 1e-13 >seq406 Length=409633 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| | || || || | ||||| ||||| || || Sbjct 107059 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCCTCAAGCTGCTTTCCG 107000 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGT-TT 21097 ||| |||| || | |||||||| || | || ||||| || ||| ||| || || Sbjct 106999 GCAAAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTTATCTTGGAT-TTTCGTCTT 106941 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 || | | ||| ||| ||| || |||| ||||| || || ||||| || || | || Sbjct 106940 GACGTTGTCGATAGTGTCAGAGGACTCCACTTCCAGCGTGATCGTCTTCCCCGTAAGAGT 106881 Query 21158 TTTGACAAATATTTGCATT 21176 || || |||||||||||| Sbjct 106880 CTTAACGAATATTTGCATT 106862 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 ||||||||| || || ||||| || || | ||| || || | ||||| || || ||||| Sbjct 106832 AGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTACGGCCATCCTCGAGTTGCTTGCC 106773 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 || |||| || | |||||||| ||| | ||| |||||||| ||||| || Sbjct 106772 TGCGAAAATCAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGTCTT 106713 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 || | | ||| || |||| || |||| || | ||| ||||||||||| || | || Sbjct 106712 GACATTGTCGATCGTGTCACTGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTAAGGGT 106653 Query 21158 TTTGAC 21163 ||||| Sbjct 106652 CTTGAC 106647 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| || | || | ||| |||||||| |||||||||||||| | | Sbjct 106572 CCGCCACGCAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAC 106513 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| ||||| || || || | || | | |||||||||| || Sbjct 106512 AGGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCCGGAGGA 106453 Query 21069 ACGCCTTCCTTGTCGGCGATCTT 21091 | || |||||||| |||||| Sbjct 106452 ATACCCTCCTTGTCCTGGATCTT 106430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422256256325552