Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq283 158 1e-33 seq406 122 9e-23 seq394 114 1e-20 seq403 104 2e-17 >seq283 Length=1466191 Score = 158 bits (174), Expect = 1e-33 Identities = 261/374 (70%), Gaps = 2/374 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 ||||||| | ||||| | || |||||| | || ||| || |||||| |||| | Sbjct 249046 AGAAGGCTCAATGGGCTATCCGTTGGATCCAAGACAAGGAGTCCACCTTCGCTCAGCGAC 249105 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || ||||| || || || ||||| |||||||||| || |||||| | || || | Sbjct 249106 TTGTTGCCTTTGCAGCTGTTGAGGGTATCTTCTTTTCTGGGTCTTTCGCATCGATCTTCT 249165 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| ||||| || ||||| ||||| || ||| |||||||| ||||| | | Sbjct 249166 GGCTGAAGAAGCGCGGTCTGATGCCAGGCCTTACCTTCTCTAACGAGCTGATCTCGCGTG 249225 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||| ||||| || |||||||| || ||||| ||| ||| | || || || | Sbjct 249226 ACGAAGGTCTCCACACTGACTTTGCTTGCTTGCTTTTCTCTCATCTCAACCACCGCCCCA 249285 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | | | || || ||| |||| || || ||| ||||||||||| ||||| | Sbjct 249286 GCAAGCAGGTCATCCAAGACATCATCACGGAGGCTGTCACCATCGAGCAGGAATTCCTGA 249345 Query 117282 CCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATC 117340 | || || || || || || || || | || || | || |||| ||||||||| Sbjct 249346 CGGATGCCCTTCCCGTCGCACTTCTCGGTATGAA-CGCCAGACTCATGTGCCAATACATC 249404 Query 117341 GAGTTCGTCGCCGA 117354 || ||||||||||| Sbjct 249405 GAATTCGTCGCCGA 249418 Score = 141 bits (156), Expect = 1e-28 Identities = 204/287 (71%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || || || || || |||||||| | ||| ||| | ||| || Sbjct 248639 ATCTGGCAAATGTACAAGAAAGCAGAAGCATCCTTCTGGACTGCCGAAGAGATCGACTTG 248698 Query 116696 TCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| ||||||| || || |||||||| |||||||| | |||||| Sbjct 248699 TCGAAGGACCTCCACGACTGGCATGACCGTTTGAACGATGACGAGCGCTACTTCATCTCT 248758 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 | || || || || ||||| || |||||||| || |||||||| |||| ||||| Sbjct 248759 CGTGTCCTTGCTTTCTTCGCTGCATCTGACGGCATTGTGAACGAGAACTTGGTGGAGCGC 248818 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||| | |||| || || |||||||||||||| || || || Sbjct 248819 TTCAGCGGCGAGGTCCAGATTCCCGAAGCTCGTTGCTTCTACGGCTTCCAAATTATGATT 248878 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT 116919 |||||| | ||||| || | || || |||||| ||||| || || Sbjct 248879 GAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGACACTTATGT 248925 >seq406 Length=409633 Score = 122 bits (134), Expect = 9e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||||||||| || || || ||||| || || ||||| | || || || || | Sbjct 106862 AATGCAAATATTCGTTAAGACTCTTACGGGGAAGACGATCACGCTGGAAGTGGAGTCCTC 106921 Query 40749 CGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | |||| ||||| ||||| | || || ||||| ||||| | |||| Sbjct 106922 TGACACTATCGACAACG-TCAAGACGAAAATCCAAGATAAGGAGGGGATCCCGCCAGACC 106980 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||||| ||||| | || || || ||||| || || | || || ||| |||||||| Sbjct 106981 AGCAACGTCTCATTTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACACTCTCCGACTACA 107040 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||| |||| || || || || Sbjct 107041 ACATCCAGAAGGAGTCCACACTCCACCTTGT 107071 Score = 109 bits (120), Expect = 6e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759 |||| || || || || ||||| ||||||||| | || || || ||| |||| | Sbjct 106645 TCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTGGAGTCCAGTGACACGATCG 106704 Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819 | | ||||| || |||| ||||| |||||||| ||| | ||||||||||| || | Sbjct 106705 ACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTGA 106764 Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 | | ||| ||||| || || || || | || || || ||| |||||||||||||| | Sbjct 106765 TTTTCGCAGGCAAGCAACTCGAGGATGGCCGTACTCTGTCCGATTACAACATCCAGAAAG 106824 Query 40880 AGGCCACGCTGCATCTAGTGTTGCG 40904 || |||| || || || || ||||| Sbjct 106825 AGTCCACTCTTCACCTTGTCTTGCG 106849 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || ||||| |||||| | || || || | || Sbjct 107319 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAAACGATCACCTTGGAAGTTGAGAGCTCC 107378 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || || | || || ||||| || || |||| || Sbjct 107379 GACACCATCGATAACG-TGAAGACCAAGATCCAAGATAAGGAGGGAATTCCACCGGATCA 107437 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| ||||||| || || || |||||||| || | ||||| || || ||||| Sbjct 107438 GCAACGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGCACTCTTTCGGATTACAA 107497 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| ||| || || Sbjct 107498 TATCCAGAAGGAGAGCACCCTTCA 107521 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || || || || || || | || ||||| || | Sbjct 107091 ATGCAGATTTTCGTGAAAACTCTTACCGGAAAGACGATTACGTTGGAAGTCGAGTCCTCT 107150 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | ||| || |||| || || ||||| || || | ||||| Sbjct 107151 GATACCATTGACAACG-TAAAGACGAAGATTCAAGATAAGGAGGGAATTCCGCCAGACCA 107209 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || || | ||| || || ||| |||| || | || || || |||||||| Sbjct 107210 GCAACGCCTGATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACTCTTTCTGACTACAA 107269 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||| ||| ||||||| || || || Sbjct 107270 CATTCAGAAAGAGTCCACGCTCCACCTTGT 107299 >seq394 Length=603486 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| ||||||| || | | ||||| | | Sbjct 13884 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 13825 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| ||||| |||||| |||||||||| || | Sbjct 13824 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTTT 13766 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | || ||| | | |||||||||||||||||| Sbjct 13765 GATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACCTTGAGCGACTACAACATCCAGAA 13706 Query 40878 GG 40879 || Sbjct 13705 GG 13704 >seq403 Length=471098 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| ||||| | |||||||| || | |||| ||| || || ||||| || Sbjct 10747 GACAAGGAGGGTATCCCGCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAG 10688 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| ||||| ||| |||||||||||||||||||||| | ||||| ||||| || || Sbjct 10687 GACGGTCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACGCTCCATCTCGTCCTG 10628 Query 40903 CG 40904 || Sbjct 10627 CG 10626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515215516182720