Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq406 120 2e-22 >seq406 Length=409633 Score = 120 bits (132), Expect = 2e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| ||||||||||| || || |||| | || ||||||||||| || |||||| Sbjct 107281 TCTTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCCTCCAACTGCTTTCCGGCGAAA 107222 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || || |||||||| || | | |||||| || ||||| ||||| | | Sbjct 107221 ATCAGGCGTTGCTGGTCTGGCGGAATTCCCTCCTTATCTTGAATCTTCGTCTTTACGTTG 107162 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || ||||| |||| ||| || || || ||||| ||||||||||| Sbjct 107161 TCAATGGTATCAGAGGACTCGACTTCCAACGTAATCGTCTTTCCGGTAAGAGTTTTCACG 107102 Query 34379 AAGATCTGCAT 34389 || |||||||| Sbjct 107101 AAAATCTGCAT 107091 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || || ||||| | ||| |||||||| |||||||| ||||| Sbjct 106862 TCCACCACGAAGACGCAAGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGA 106803 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| |||| | || || | ||||||||||||||||| || || ||||||||| ||| Sbjct 106802 CAGAGTACGGCCATCCTCGAGTTGCTTGCCTGCGAAAATCAGACGTTGCTGGTCGGGGGG 106743 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | || | | |||| || | || || || Sbjct 106742 AATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATCGTGTCACTGGACTCCAC 106683 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 || | |||||||| ||||| || || || || || Sbjct 106682 CTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGAC 106647 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | || || ||||| | |||| || ||||| ||||| ||||||||| Sbjct 106572 CCGCCACGCAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAC 106513 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || ||||| || | ||||||||||| || Sbjct 106512 AGGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCCGGAGGA 106453 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | ||| | |||||||| Sbjct 106452 ATACCCTCCTTGTCCTGGATCTTGGTCTTAACGTTGTCGATGGTGTCGCTGGATTCGACC 106393 Query 34343 TCCACCGTGATGGTTTTGCCGGT 34365 || | |||||||| || || || Sbjct 106392 TCTAGAGTGATGGTCTTCCCAGT 106370 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || |||| | || || | |||||| || || ||| Sbjct 107053 TCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAA 106994 Query 34259 ATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||||| || |||||||| | |||| | | |||||| || || || ||| | | Sbjct 106993 ATGAGACGTTGCTGGTCTGGCGGG-ATCCCCTCCTTATCTTGGATTTTCGTCTTGACGTT 106935 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | || || || |||| |||||| || || || || ||||| || || Sbjct 106934 GTCGATAGTGTCAGAGGACTCCACTTCCAGCGTGATCGTCTTCCCCGTAAGAGTCTTAAC 106875 Query 34378 AAAGATCTGCAT 34389 || || ||||| Sbjct 106874 GAATATTTGCAT 106863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323069747784320