Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq403 100 2e-16 seq406 95.1 1e-14 seq394 91.5 1e-13 >seq403 Length=471098 Score = 100 bits (110), Expect = 2e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| || |||| |||| || || || Sbjct 10638 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCCTCGAGCTGC 10697 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 ||||||||||| ||||| ||||| |||||||| || | |||||||||||| Sbjct 10698 TTTCCGGCGAAGATCAAACGCTGCTGGTCGGGCGGGATACCCTCCTTGTC 10747 >seq406 Length=409633 Score = 95.1 bits (104), Expect = 1e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||||||||| |||||| ||| ||| |||| || || || ||||| ||||| Sbjct 106537 CTCCTTCTGAATGTTATAGTCGGACAGGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAA 106478 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 ||||| ||||| ||||| ||||| | ||||||||||||| Sbjct 106477 GATCAAACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 106438 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || || | ||| || ||| ||| ||||| |||||||| ||| ||| || | || Sbjct 106846 AAGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTACGGCCATCC 106787 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || ||||| || || ||||| |||| || || |||||||| || | |||||||||||| Sbjct 106786 TCGAGTTGCTTGCCTGCGAAAATCAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 106727 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || ||| || | | |||| | ||||||||| | ||| || ||| Sbjct 106726 TGAATCTTCGTCTTGACATTGTCGATCGTGTCACTGGACTCCACCTCAAGGGTGATGGTC 106667 Query 45305 TTGCCCGTCAGAGTCTTCAC 45324 ||||| || || ||||| || Sbjct 106666 TTGCCAGTAAGGGTCTTGAC 106647 >seq394 Length=603486 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/185 (72%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCA--GT-TGGCGATCGTCGTCCAGTTGTTTTCCGGCGA 45203 ||||||| |||||||||||| ||| || ||| ||| ||| || || || || |||| Sbjct 13704 CCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCATCCTCG---AGCTGCTTACCAGCGA 13760 Query 45204 ATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCG 45263 | ||||| ||||| ||||| || || | ||||||||||||| || || ||| || Sbjct 13761 AGATCAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGT 13820 Query 45264 CCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323 | | | |||| | ||| || || | |||||| ||||| |||||||| ||||| | Sbjct 13821 TGTCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGA 13880 Query 45324 CAAAG 45328 | ||| Sbjct 13881 CGAAG 13885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395072445832012