Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq283 214 2e-50 seq406 91.5 1e-13 seq394 84.2 2e-11 >seq283 Length=1466191 Score = 214 bits (236), Expect = 2e-50 Identities = 431/638 (68%), Gaps = 6/638 (1%) Strand=Plus/Minus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 ||||||||| ||||||| | || || |||| ||||||||||||| || || || | Sbjct 590628 TCAACGCGTTTCATAAACAAGTCTGGAGTCCAGAGAGCGTAGAACAAATCACGAGCTCTA 590569 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || |||||||||||| |||||| | ||||| || || || || || | ||||| Sbjct 590568 ACTTCCTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAAACATCGGAGTGCCAT 590509 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||| | || | |||||| || || || | |||||| || || || || || || | Sbjct 590508 GGCTCCAAATAGATGGCAAAAGCACCTGGGCGCTTATTACCTCCTTGGTCTACATACCTC 590449 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581 || |||||||| || || | ||||| || || | || || || | ||| ||| Sbjct 590448 GCAGTGTTGTTATAGACGCGGAGCATGGGGACAATTCCATTAGAAGAACCGTTGGTGCCA 590389 Query 23582 GCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGAT 23641 | | || ||| | || |||| |||| |||| || ||| ||||| ||| ||| Sbjct 590388 CCGATGTAGGAGCCTGTAGCACGAATTCTGTGGACGTTGAGACCGATGCCACCGGCCGTC 590329 Query 23642 TTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTG 23701 || || ||||| ||||| || | ||||| |||||||| || ||||| ||| | || Sbjct 590328 TTGGAGATCATTGCGCAAGTCTTTAACGTGTCATAGATGCCTTCAATGCTATCCGCCTTC 590269 Query 23702 GTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTC 23761 | |||||| |||||| || | | ||| || | || ||| | || || | |||| Sbjct 590268 ATATCGACCAGGAAACAAGAGGCTAATTGGGCCTGCGGAGTACCAGCGTTAAATAATGTC 590209 Query 23762 GGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCA 23821 || || || || ||||| | ||||| | | || || |||||||| ||| Sbjct 590208 GGCGAAGCATGTGTGAAGTACTTCTGAGACATCAAGTGATAAGTTTCGATGGCTTTTTCA 590149 Query 23822 ATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATT---GAGGTCTCTCG 23878 ||||| || |||||||| || | ||| || ||||||| ||||| || || || | | Sbjct 590148 ATGTCTTCACCGTGTATGCCAACGGCAACCCGCATCAGCATGTGTTGTGGACGTTCCGCA 590089 Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938 ||| | || ||||| | || ||||| || | | ||| ||||| || || || Sbjct 590088 ACCTT---CCCATTAATCCGTAGGAGGTATGACCGCTCAAGCGTCTTAAAACCGAAGAAG 590032 Query 23939 TCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 | |||||| ||||||||||| | ||| || || || || Sbjct 590031 TTATAGTTGAAGTCACGATCATACACGATAGCAGAGTT 589994 Score = 109 bits (120), Expect = 5e-19 Identities = 170/239 (71%), Gaps = 8/239 (3%) Strand=Plus/Minus Query 23017 GACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAAT 23076 || |||||| || || || ||||| || || |||||||| | || ||| || ||||| Sbjct 591009 GAGGGCGATGGAAGCCAGGTTGCAGACAGCAACCTCGTCAGGAGCCGAGTATTCGACAAT 590950 Query 23077 TTCGGTACATAGATT---GCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCG 23133 ||||| || || || ||| | || || ||||| || |||||||||| |||| Sbjct 590949 CTCGGTGCAAAGGTTAGAGCTGCGA---ATAGTTCCCAAGTTCTTCTGGTTGCTCTTTCT 590893 Query 23134 ATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGAT 23193 ||||| ||||||||||| ||||| | || ||||||||||| |||||| || | ||| Sbjct 590892 GTTGCAAGAATCCTTGTACAGCATAAAGGGGTTGCCCGTCTCGGTCTGCGATTCCAAGAT 590833 Query 23194 CGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACG-TACCTGCCTTCTTCCTCGTAC 23251 || ||| | ||||||| | || || ||| ||||||||||| ||||||| Sbjct 590832 AGCATACCAAAGCTTCTGAGCTTTGAC-GGTTCTACGACCCCTGCCTTCTTTCTCGTAC 590775 >seq406 Length=409633 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/202 (70%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC---GACAGTG 31259 |||| ||||| || || ||||| || |||||| | || || || |||| |||| Sbjct 106645 TCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTGGA---GTCCAGTGACACGA 106701 Query 31260 TCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 |||| | ||||| || || ||||||||| ||| | || ||||||||||| |||| Sbjct 106702 TCGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTC 106761 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || ||||| ||||| || | || || ||| || |||||| ||||| || | Sbjct 106762 TGATTTTCGCAGGCAAGCAACTCGAGGATGGCCGTACTCTGTCCGATTACAACATCCAGA 106821 Query 31380 AAGAATCGACTCTTCATCTGGT 31401 |||| || |||||||| || || Sbjct 106822 AAGAGTCCACTCTTCACCTTGT 106843 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 31215 TGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGA-AACGGTCAAA 31273 |||| || || || ||||| | || || ||| | ||||| |||| |||| | | | Sbjct 106368 TGACTGGGAAGACCATCACTCTAGAGGTCGAATCCAGCGACACCATCGACAACGTTAAGA 106427 Query 31274 CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGC 31333 | ||| | ||||||||| || | || || |||||||||||| | || |||||||| Sbjct 106428 CCAAGA-TCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAGCGTTTGATCTTCGCTGGA 106486 Query 31334 AAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTT 31393 || ||| | || ||| | || || ||| ||||||||||| || || || ||||| Sbjct 106487 AAGCAGCTTGAGGACGGTCGTACCCTGTCCGACTATAACATTCAGAAGGAGTCTACTCTC 106546 Query 31394 CATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || | ||| | ||||||| Sbjct 106547 CACCTTGTCCTCCGTCTGCGTGGCGGTA 106574 >seq394 Length=603486 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| ||||| || || || || ||| |||||||||| || ||||| || Sbjct 13884 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 13825 Query 31262 GAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 || | ||||| || ||| | ||||||||| || | || || |||||||||||| | Sbjct 13824 GACAACGTCAAGACCAAGA-TCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTTT 13766 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || |||||||| || ||| | || || || ||||||| || ||||| || || Sbjct 13765 GATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACCTTGAGCGACTACAACATCCAGAA 13706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763212770240