Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq283 161 1e-34 >seq283 Length=1466191 Score = 161 bits (178), Expect = 1e-34 Identities = 576/896 (64%), Gaps = 6/896 (1%) Strand=Plus/Minus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || ||||| || || |||||| |||| | ||| || | |||||| | | | | Sbjct 590703 TCAAACTCATCGCCGTAAACATCTGCCAAACCAGGTGCCTCGTTCGGACAGAAAAGGGTC 590644 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308 || || |||| || || ||||||||||| | || ||| |||| ||||| || Sbjct 590643 CAATCACCGTTCGACTCAACGCGTTTCATAAACAAGTCTGGAGTCCAGAGAGCGTAGAAC 590584 Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368 | ||| | | |||| |||||| || || ||||| ||| || | |||| | | | Sbjct 590583 AAATCACGAGCTCTAACTTCCTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAA 590524 Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428 | ||| || ||||| || ||||| || ||||| | | | || || || || || ||||| Sbjct 590523 ACATCGGAGTGCCATGGCTCCAAATAGATGGCAAAAGCACCTGGGCGCTTATTACCTCCT 590464 Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488 || |||| || || || ||||| ||||| || | | ||| || | ||| || || || Sbjct 590463 TGGTCTACATACCTCGCAGTGTTGTTATAGACGCGGAGCATGGGGACAATTCCATTAGAA 590404 Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAA--TTGATAGAC 63546 ||| ||||| || ||| ||| || | |||||||| | | ||| |||| Sbjct 590403 GAACCGTTGGTGCCACCGATGTAGGAGCCTGTAGCACGAATTCTGTGGACGTTG--AGAC 590346 Query 63547 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTT 63606 | || || || ||| | || ||||| | |||||| |||||||||||||||||||||| Sbjct 590345 CGATGCCACCGGCCGTCTTGGAGATCATTGCGCAAGTCTTTAACGTGTCATAGATGCCTT 590286 Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666 | |||||||| | |||| | | || ||||| | | |||| | | ||| | Sbjct 590285 CAATGCTATCCGCCTTCATATCGACCAGGAAACAAGAGGCTAATTGGGCCTGCGGAGTAC 590226 Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726 | || |||||||| || || ||||| || || || | || | ||| | | | || | Sbjct 590225 CAGCGTTAAATAATGTCGGCGAAGCATGTGTGAAGTACTTCTGAGACATCAAGTGATAAG 590166 Query 63727 TCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATG 63785 | || || ||| || || || || | || || || || || || ||||| | |||| Sbjct 590165 TTTCGATGGCTTTTTCAATGTCTTCACCG-TGTATGCCAACGGCAACCCGCATCAGCATG 590107 Query 63786 TGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63845 || || || | ||| ||| || || || | | ||| || || | || Sbjct 590106 TGTTGTGGACGTTCCGCAACCTTCCCATTAATCCGTAGGAGGTATGACCGCTCAAGCGTC 590047 Query 63846 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTA 63905 |||||||| || |||| || ||||| || || || | ||| | || || || | | Sbjct 590046 TTAAAACCGAAGAAGTTATAGTTGAAGTCACGATCATACACGATAGCAGAGTTAAGTTCA 589987 Query 63906 TCCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCA 63965 || || ||| | || || || || | || || || || | || | Sbjct 589986 CCCGCATGTTTCATGACAATTTCGTAAGTTTGATCCGATATCATAGGTGCTGCTTGATTA 589927 Query 63966 TTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTT 64025 || || ||||||||| ||| |||||||| || || |||| | || || ||| Sbjct 589926 TTCTTCGGATTAACAAAGTGATATAAATCCGATATGACCAAGGAAAATTGCTTCTTCGTT 589867 Query 64026 TCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081 | |||||| || || || | ||| || | ||| || || ||||| || || || || Sbjct 589866 TGCTTGTGAAGGTTGGAAACGGCAATACGGGCAGCGAGGATGGCGTAGTCTGGGTG 589811 Score = 96.9 bits (106), Expect = 4e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 ||| || || || || ||| ||||| ||||| | || | |||||||| || || Sbjct 249257 CAAGCAAGCAAAGTCAGTGTGGAGACCTTCGTCACGCGAGATCAGCTCGTTAGAGAAGGT 249198 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 || || ||||| || || ||||| || ||||| || || || ||||| || || ||||| Sbjct 249197 AAGGCCTGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGATGCGAAAGACCCAGAAAA 249138 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCT 33735 |||||| || || || || |||||||||| ||||| || Sbjct 249137 GAAGATACCCTCAACAGCTGCAAAGGCAACAAGTCGCT 249100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629813096804160