Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq283 158 2e-33 >seq283 Length=1466191 Score = 158 bits (174), Expect = 2e-33 Identities = 406/614 (66%), Gaps = 6/614 (1%) Strand=Plus/Minus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 || ||||| || || |||||| |||| ||||| || | |||||| | | | | Sbjct 590703 TCAAACTCATCGCCGTAAACATCTGCCAAACCAGGTGCCTCGTTCGGACAGAAAAGGGTC 590644 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101 || || |||| || || ||||||||||| | || ||| |||| ||||| || Sbjct 590643 CAATCACCGTTCGACTCAACGCGTTTCATAAACAAGTCTGGAGTCCAGAGAGCGTAGAAC 590584 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 ||||| | | |||| |||||| || || ||||| ||| || | |||| | | | Sbjct 590583 AAATCACGAGCTCTAACTTCCTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAA 590524 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221 | ||| | ||||| || ||||| || ||||| | | | || || || || || ||||| Sbjct 590523 ACATCGGAGTGCCATGGCTCCAAATAGATGGCAAAAGCACCTGGGCGCTTATTACCTCCT 590464 Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281 || |||| || || || ||||| ||||| || | | ||| || | ||| ||||| || Sbjct 590463 TGGTCTACATACCTCGCAGTGTTGTTATAGACGCGGAGCATGGGGACAATTCCATTAGAA 590404 Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAA--TTGATAGAC 66339 | ||| ||||| || ||| ||| || | |||||||| | | ||| |||| Sbjct 590403 GAACCGTTGGTGCCACCGATGTAGGAGCCTGTAGCACGAATTCTGTGGACGTTG--AGAC 590346 Query 66340 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 66399 | || || || ||| | || ||||| | |||||| |||||||| ||||||||||| | Sbjct 590345 CGATGCCACCGGCCGTCTTGGAGATCATTGCGCAAGTCTTTAACGTGTCATAGATGCCTT 590286 Query 66400 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 66459 | || ||||| || |||| | | || ||||| | | |||| | ||| | Sbjct 590285 CAATGCTATCCGCCTTCATATCGACCAGGAAACAAGAGGCTAATTGGGCCTGCGGAGTAC 590226 Query 66460 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 66519 | || |||||||| || || ||||| || || || | || | ||| | | | || | Sbjct 590225 CAGCGTTAAATAATGTCGGCGAAGCATGTGTGAAGTACTTCTGAGACATCAAGTGATAAG 590166 Query 66520 TCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATG 66578 | || || ||| || || || || | || || || || || || ||||| | |||| Sbjct 590165 TTTCGATGGCTTTTTCAATGTCTTCACCG-TGTATGCCAACGGCAACCCGCATCAGCATG 590107 Query 66579 TGCTGAGGTCTTTC 66592 || || || | ||| Sbjct 590106 TGTTGTGGACGTTC 590093 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 ||| || || || || ||| ||||| ||||| | || | ||||| || || || Sbjct 249257 CAAGCAAGCAAAGTCAGTGTGGAGACCTTCGTCACGCGAGATCAGCTCGTTAGAGAAGGT 249198 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273 || || ||||| || || ||||| || ||||| || || || || || || |||||||| Sbjct 249197 AAGGCCTGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGATGCGAAAGACCCAGAAAA 249138 Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCT 36311 ||| || || || || || |||||||||| ||||| || Sbjct 249137 GAAGATACCCTCAACAGCTGCAAAGGCAACAAGTCGCT 249100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658168094064480