Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq406 102 8e-17 >seq406 Length=409633 Score = 102 bits (112), Expect = 8e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||| || | ||||| || |||||||| || ||||| |||||| | Sbjct 106861 CCACCACGAAGACGCAAGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGAC 106802 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | || ||||| || || || || | |||||||||||||| ||||| || Sbjct 106801 AGAGTACGGCCATCCTCGAGTTGCTTGCCTGCGAAAATCAGACGTTGCTGGTCGGGGGGA 106742 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| | || || || | | || | ||||| ||| |||||| Sbjct 106741 ATGCCCTCCTTGTC-CTGAATCTTCGTCTTGACATTGTCGATCGTGTCACTGGACTCCAC 106683 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGA 139754 ||||| ||| | |||||||| || | || || |||| Sbjct 106682 CTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGA 106645 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| ||||||| || ||| || || || || ||||| Sbjct 107545 CCACCACGGAGACGGAGAACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAA 107486 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||| ||||||||| |||| |||||||||||||| || || Sbjct 107485 AGAGTGCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGA 107426 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || || || ||| || || | | || | ||||||| | ||| || Sbjct 107425 ATTCCCTCCTTATCTTGGATCTTGGTCTTCACGTTATCGATGGTGTCGGAGCTCTCAACT 107366 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||| || ||||| | || || ||||| || |||||| Sbjct 107365 TCCAAGGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATCTGCATA 107318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496060453142400