Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq283 178 2e-39 >seq283 Length=1466191 Score = 178 bits (196), Expect = 2e-39 Identities = 582/898 (65%), Gaps = 10/898 (1%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || ||||| || || ||||||| | || ||||| |||| ||||| | | | | Sbjct 590703 TCAAACTCATCGCCGTAAACATCTGCCAAACCAGGTGCCTCGTTCGGACAGAAAAGGGTC 590644 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || || | || || ||||||||||| | || ||| |||| ||||| || Sbjct 590643 CAATCACCGTTCGACTCAACGCGTTTCATAAACAAGTCTGGAGTCCAGAGAGCGTAGAAC 590584 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 | ||| | | |||| ||||| || || ||||| ||| || | |||| | | | Sbjct 590583 AAATCACGAGCTCTAACTTCCTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAA 590524 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | ||| || ||||| || ||||| || ||||| | | | || || || || || ||||| Sbjct 590523 ACATCGGAGTGCCATGGCTCCAAATAGATGGCAAAAGCACCTGGGCGCTTATTACCTCCT 590464 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || |||| || || || ||||| ||||| || | | ||| || | ||| ||||| || Sbjct 590463 TGGTCTACATACCTCGCAGTGTTGTTATAGACGCGGAGCATGGGGACAATTCCATTAGAA 590404 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGAC 80218 | ||| ||||| || ||| ||| || | |||||||| | | ||| |||| Sbjct 590403 GAACCGTTGGTGCCACCGATGTAGGAGCCTGTAGCACGAATTCTGTGGACGTTG--AGAC 590346 Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 80278 | || || || ||| | || ||||| | |||||| |||||||| ||||||||||| | Sbjct 590345 CGATGCCACCGGCCGTCTTGGAGATCATTGCGCAAGTCTTTAACGTGTCATAGATGCCTT 590286 Query 80279 CTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 80338 | |||||||| | |||| | | || ||||| | | |||| | ||| | Sbjct 590285 CAATGCTATCCGCCTTCATATCGACCAGGAAACAAGAGGCTAATTGGGCCTGCGGAGTAC 590226 Query 80339 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 80398 | || |||||||| || || ||||| || || || | || | ||||| | | || | Sbjct 590225 CAGCGTTAAATAATGTCGGCGAAGCATGTGTGAAGTACTTCTGAGACATCAAGTGATAAG 590166 Query 80399 TCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCATTAACATG 80457 | || || ||| ||| || || || | || || || || || || ||||| | |||| Sbjct 590165 TTTCGATGGCTTTTTCAATGTCTTCACCG-TGTATGCCAACGGCAACCCGCATCAGCATG 590107 Query 80458 TGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTT 80517 || || || | ||| | | ||| ||| || | | ||| || || | || Sbjct 590106 TGTTGTGGACGTTCCGCAACCTTCCCATTAATCCGTAGGAGGTATGACCGCTCAAGCGTC 590047 Query 80518 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 80577 |||||||| || |||| || ||||| || || || | ||| | ||||| |||| | Sbjct 590046 TTAAAACCGAAGAAGTTATAGTTGAAGTCACGATCATACACGATAGCAGAGTTAAGTTCA 589987 Query 80578 TCCTTATATTTGTTAACTACATC--CATGGTGATACTTGAAATAATCGGAGAATGTTTCC 80635 || || ||| | || | || | |||| | || || || || | || Sbjct 589986 CCCGCATGTTTCATGACAATTTCGTAAGTTTGATCC--GATATCATAGGTGCTGCTTGAT 589929 Query 80636 CATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttG 80695 ||| || ||||||||| ||| |||||||| || || |||| | || || | Sbjct 589928 TATTCTTCGGATTAACAAAGTGATATAAATCCGATATGACCAAGGAAAATTGCTTCTTCG 589869 Query 80696 TTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 ||| |||||| || || || ||||| || | ||| || | ||||| || ||||| || Sbjct 589868 TTTGCTTGTGAAGGTTGGAAACGGCAATACGGGCAGCGAGGATGGCGTAGTCTGGGTG 589811 Score = 105 bits (116), Expect = 1e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| || || || || ||| ||||| ||||| | || || ||||| || || || Sbjct 249257 CAAGCAAGCAAAGTCAGTGTGGAGACCTTCGTCACGCGAGATCAGCTCGTTAGAGAAGGT 249198 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 || || ||||| || || ||||| || ||||| || || || || || ||||||||||| Sbjct 249197 AAGGCCTGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGATGCGAAAGACCCAGAAAA 249138 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCT 50113 |||||| || || || || |||||||||||||||| || Sbjct 249137 GAAGATACCCTCAACAGCTGCAAAGGCAACAAGTCGCT 249100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718263664378080