Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq283 181 1e-40 >seq283 Length=1466191 Score = 181 bits (200), Expect = 1e-40 Identities = 536/820 (65%), Gaps = 10/820 (1%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || ||||||||||| | || ||| |||| ||||| || | ||| | | |||| Sbjct 590625 ACGCGTTTCATAAACAAGTCTGGAGTCCAGAGAGCGTAGAACAAATCACGAGCTCTAACT 590566 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 ||||| || || ||||| ||| || | |||| | | || ||| || ||||| || Sbjct 590565 TCCTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAAACATCGGAGTGCCATGGC 590506 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 ||||| || ||||| | | | || || || || || ||||| || |||| || || || Sbjct 590505 TCCAAATAGATGGCAAAAGCACCTGGGCGCTTATTACCTCCTTGGTCTACATACCTCGCA 590446 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 ||||| ||||| || | | ||| || | ||| ||||| || | ||| ||||| || | Sbjct 590445 GTGTTGTTATAGACGCGGAGCATGGGGACAATTCCATTAGAAGAACCGTTGGTGCCACCG 590386 Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATTT 72319 || ||| || | |||||||| || | ||| ||||| || || || ||| | | Sbjct 590385 ATGTAGGAGCCTGTAGCACGAATTCTGTGGACGTTG--AGACCGATGCCACCGGCCGTCT 590328 Query 72320 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 72379 | ||||| | |||||| |||||||| ||||||||||| || || ||||| || ||| Sbjct 590327 TGGAGATCATTGCGCAAGTCTTTAACGTGTCATAGATGCCTTCAATGCTATCCGCCTTCA 590268 Query 72380 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 72439 | | | || ||||| | | |||| | ||| || || |||||||| || | Sbjct 590267 TATCGACCAGGAAACAAGAGGCTAATTGGGCCTGCGGAGTACCAGCGTTAAATAATGTCG 590208 Query 72440 GAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTA 72499 | ||||| || || || | || | ||||| | | || || || || ||| ||| | Sbjct 590207 GCGAAGCATGTGTGAAGTACTTCTGAGACATCAAGTGATAAGTTTCGATGGCTTTTTCAA 590148 Query 72500 TATC-CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACG 72558 | || || | ||||| || || || || ||||| | ||| || || || | ||| | Sbjct 590147 TGTCTTCACCG-TGTATGCCAACGGCAACCCGCATCAGCATGTGTTGTGGACGTTCCGCA 590089 Query 72559 ATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 72618 | ||| ||| || | | ||| || || | || |||||||| || |||| Sbjct 590088 ACCTTCCCATTAATCCGTAGGAGGTATGACCGCTCAAGCGTCTTAAAACCGAAGAAGTTA 590029 Query 72619 TATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACT 72678 || ||||| || || || | ||| | || || |||| | || || ||| | || Sbjct 590028 TAGTTGAAGTCACGATCATACACGATAGCAGAGTTAAGTTCACCCGCATGTTTCATGACA 589969 Query 72679 ATATC--CATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACAT 72736 || || | |||| | || || || || | || ||| || ||||||||| Sbjct 589968 ATTTCGTAAGTTTGATCC--GATATCATAGGTGCTGCTTGATTATTCTTCGGATTAACAA 589911 Query 72737 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTG 72796 ||| |||||||| || || |||| | || || |||| |||||| || || | Sbjct 589910 AGTGATATAAATCCGATATGACCAAGGAAAATTGCTTCTTCGTTTGCTTGTGAAGGTTGG 589851 Query 72797 ATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 | ||||| || | ||| || || ||||| || ||||| || Sbjct 589850 AAACGGCAATACGGGCAGCGAGGATGGCGTAGTCTGGGTG 589811 Score = 89.7 bits (98), Expect = 7e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166 ||||| || || || || || ||||| || || ||||| || ||||| || || || || Sbjct 249211 TCGTTAGAGAAGGTAAGGCCTGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGATGCG 249152 Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCT 42218 || || |||||||||||||| || || || || |||||||||| ||||| || Sbjct 249151 AAAGACCCAGAAAAGAAGATACCCTCAACAGCTGCAAAGGCAACAAGTCGCT 249100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671134401354720