Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq406 118 2e-21 seq283 107 4e-18 >seq406 Length=409633 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || ||||||||||| || |||||||| ||||| | || || Sbjct 107303 AAGGACAAGGTGGAGCGTGGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATC 107244 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | || ||||| || ||||| || | || || || || || ||||| || ||||| Sbjct 107243 CTCCAACTGCTTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGCGGAATTCCCTCCTTATC 107184 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||| | ||||| || || | |||||| | || || || | ||||| || Sbjct 107183 TTGAATCTTCGTCTTTACGTTGTCAATGGTATCAGAGGACTCGACTTCCAACGTAATCGT 107124 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || ||||| ||||| || || |||||||| Sbjct 107123 CTTTCCGGTAAGAGTTTTCACGAAAATCTGCAT 107091 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || || || || ||||| | || || || ||||| || || Sbjct 106831 GTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTACGGCCATCCTCGAGTTGCTTGCCT 106772 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | || || || || || || || || || ||||||||||| | || Sbjct 106771 GCGAAAATCAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGTCTTG 106712 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || || || | || ||||| || || || ||||| |||||||| || Sbjct 106711 ACATTGTCGATCGTGTCACTGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTC 106652 Query 104543 TTTAC 104547 || || Sbjct 106651 TTGAC 106647 >seq283 Length=1466191 Score = 107 bits (118), Expect = 4e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| ||||| ||||| || ||||| |||||||| |||||||| || | ||||| ||| Sbjct 249108 GTTGCCTTTGCAGCTGTTGAGGGTATCTTCTTTTCTGGGTCTTTCGCATCGATCTTCTGG 249167 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||| | || || |||||||| | || ||||||||||| |||| | ||| Sbjct 249168 CTGAAGAAGCGCGGTCTGATGCCAGGCCTTACCTTCTCTAACGAGCTGATCTCGCGTGAC 249227 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGttt 269286 |||||| | ||| ||||| ||||| || Sbjct 249228 GAAGGTCTCCACACTGACTTTGCTTGCTT 249256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151389961688976