Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq406 96.9 3e-15 >seq406 Length=409633 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||| ||| |||||| | || || | | |||||| ||||| ||||| || || || Sbjct 107246 ATCCTCCAACTGCTTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGCGGAATTCCCTCCTT 107187 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | ||| || | ||| ||| | | | || |||| | ||||| || | ||| || Sbjct 107186 ATCTTGAATCTTCGTCTTTACGTTGTCAATGGTATCAGAGGACTCGACTTCCAACGTAAT 107127 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| |||||||||||||| || |||||||| Sbjct 107126 CGTCTTTCCGGTAAGAGTTTTCACGAAAATCTGCAT 107091 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/222 (70%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 94766 TTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGC 94825 ||| || ||| || || || | || || | || | ||| | |||||| ||||| || Sbjct 106587 TTACAAATTTGCATACCGCCACGCAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGA 106528 Query 94826 ACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATC 94883 | |||||| ||| || | || || ||||| ||||| ||||| | ||||| || | Sbjct 106527 ATGTTATAGTCGGACA--GGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAAC 106470 Query 94884 TTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAG 94943 ||||| || ||||||||||| || ||||| | || || | ||| ||| | ||| | Sbjct 106469 GCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGTCTTAACGTTGTCGATGG 106410 Query 94944 TGTCAGCGTGG--TCGACGTCAATCGTGATGGTTTTTCCAGT 94983 |||| || ||| ||||| || | |||||||| || ||||| Sbjct 106409 TGTC-GC-TGGATTCGACCTCTAGAGTGATGGTCTTCCCAGT 106370 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||||||| || || ||||||| | | ||||||||| || ||||| || || || Sbjct 107474 ATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGAATTCCCTCCTT 107415 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || | ||| ||| ||| ||||| | | || || || | ||||| Sbjct 107414 ATCTTGGATCTTGGTCTTCACGTTATCGATGGTGTCGGAGCTCTCAACTTCCAAGGTGAT 107355 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || ||||| || || ||||||||||| Sbjct 107354 CGTTTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 107319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448287994717920