Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq397 183 5e-42 seq392 156 7e-34 >seq397 Length=534768 Score = 183 bits (202), Expect = 5e-42 Identities = 191/248 (77%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| |||| Sbjct 287180 CGCCAAGCGTCACCGCAAGATCT-TACGTGACAACATCCAGGGTATCACCAAGCCCGCTA 287238 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| || || |||||||| ||||||||| |||||| || |||| || |||| Sbjct 287239 TCCGTCGTCTTGCGCGCCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 287298 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| |||||| ||||| || || |||| ||| || || ||| || | Sbjct 287299 CCCGTGGTGTCCTGAAGACTTTCCTTGAGGGTGTCATCCGTGACGCCGTCACCTACACTG 287358 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| |||||||| | ||| ||||||| || | || || |||| Sbjct 287359 AGCACGCCAAGCGAAAGACCGTCACCTCTCTAGATGTCGTCTACGCCCTTAAGCGGCAAG 287418 Query 16671 GCCGTAAG 16678 | |||||| Sbjct 287419 GACGTAAG 287426 >seq392 Length=708783 Score = 156 bits (172), Expect = 7e-34 Identities = 197/268 (74%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct 18695 GCCAAGCGTCACCGCAAGATCT-TACGCGACAACATCCAGGGTATCACCAAGCCCGCTAT 18637 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| ||||| |||||||| ||||||||| | |||| || |||| ||||| | Sbjct 18636 TCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATTTCTGCCATGATCTACGAAGAAAC 18577 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| |||||| | |||| |||| ||| || | ||| ||||| Sbjct 18576 CCGCGGTGTCCTTAAGTCCTTCCTGGAATCCGTCATCCGTGACGCGGTTACCTACACCGA 18517 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||| || |||||||| || || | ||| | ||||| || | || || || || Sbjct 18516 ACACGCTAAGCGCAAGACTGTTACGTCGCTCGATGTTGTCTACGCCCTCAAGCGCCAGGG 18457 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | || ||||| || ||||| Sbjct 18456 ACGTACTCTGTACGGTTTCGGTGGTTAA 18429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074677016396