Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq283 168 8e-37 >seq283 Length=1466191 Score = 168 bits (186), Expect = 8e-37 Identities = 580/898 (65%), Gaps = 10/898 (1%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || ||||| || || |||||| |||| ||||| || | |||||| | | | | Sbjct 590703 TCAAACTCATCGCCGTAAACATCTGCCAAACCAGGTGCCTCGTTCGGACAGAAAAGGGTC 590644 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || || |||| || || ||||||||||| | || ||| |||| ||||| || Sbjct 590643 CAATCACCGTTCGACTCAACGCGTTTCATAAACAAGTCTGGAGTCCAGAGAGCGTAGAAC 590584 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 | ||| | | |||| |||||| || || ||||| ||| || | |||| | | | Sbjct 590583 AAATCACGAGCTCTAACTTCCTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCAAAA 590524 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | ||| || ||||| || ||||| || ||||| | | | || || || || || ||||| Sbjct 590523 ACATCGGAGTGCCATGGCTCCAAATAGATGGCAAAAGCACCTGGGCGCTTATTACCTCCT 590464 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || |||| || || || ||||| ||||| || | | ||| || | ||| || || || Sbjct 590463 TGGTCTACATACCTCGCAGTGTTGTTATAGACGCGGAGCATGGGGACAATTCCATTAGAA 590404 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGAC 63495 ||| ||||| || ||| ||| || | |||||||| | | ||| |||| Sbjct 590403 GAACCGTTGGTGCCACCGATGTAGGAGCCTGTAGCACGAATTCTGTGGACGTTG--AGAC 590346 Query 63496 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCT 63555 | || || || ||| | || ||||| | |||||| ||||||||||||||||| || | Sbjct 590345 CGATGCCACCGGCCGTCTTGGAGATCATTGCGCAAGTCTTTAACGTGTCATAGATGCCTT 590286 Query 63556 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63615 | |||||||| | |||| | | || ||||| | | |||| | ||| | Sbjct 590285 CAATGCTATCCGCCTTCATATCGACCAGGAAACAAGAGGCTAATTGGGCCTGCGGAGTAC 590226 Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63675 | || |||||||| || || ||||| || || || | || | ||| | | | || | Sbjct 590225 CAGCGTTAAATAATGTCGGCGAAGCATGTGTGAAGTACTTCTGAGACATCAAGTGATAAG 590166 Query 63676 TCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 | || || ||| || || || || | || || || || || || ||||| | |||| Sbjct 590165 TTTCGATGGCTTTTTCAATGTCTTCACCG-TGTATGCCAACGGCAACCCGCATCAGCATG 590107 Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794 || || || | ||| | | ||| || || | | ||| || || | || Sbjct 590106 TGTTGTGGACGTTCCGCAACCTTCCCATTAATCCGTAGGAGGTATGACCGCTCAAGCGTC 590047 Query 63795 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTA 63854 |||||||| || |||| || ||||| || || || | ||| | ||||| |||| | Sbjct 590046 TTAAAACCGAAGAAGTTATAGTTGAAGTCACGATCATACACGATAGCAGAGTTAAGTTCA 589987 Query 63855 TCCTTATATTTGTTAACTATATC--CATGGTGATACTTGAAATAATCGGAGAATGTTTCC 63912 || || ||| | || || || | |||| | || || || || | || Sbjct 589986 CCCGCATGTTTCATGACAATTTCGTAAGTTTGATCC--GATATCATAGGTGCTGCTTGAT 589929 Query 63913 CATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttG 63972 ||| || ||||||||| ||| |||||||| || || |||| | || || | Sbjct 589928 TATTCTTCGGATTAACAAAGTGATATAAATCCGATATGACCAAGGAAAATTGCTTCTTCG 589869 Query 63973 TTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 ||| |||||| || || || ||||| || | ||| || || ||||| || || || || Sbjct 589868 TTTGCTTGTGAAGGTTGGAAACGGCAATACGGGCAGCGAGGATGGCGTAGTCTGGGTG 589811 Score = 100 bits (110), Expect = 4e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 ||| || || || || ||| ||||| ||||| | || || ||||| || || || Sbjct 249257 CAAGCAAGCAAAGTCAGTGTGGAGACCTTCGTCACGCGAGATCAGCTCGTTAGAGAAGGT 249198 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 || || ||||| || || ||||| || ||||| || || || ||||| || |||||||| Sbjct 249197 AAGGCCTGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGATGCGAAAGACCCAGAAAA 249138 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCT 33457 |||||| || || || || |||||||||| ||||| || Sbjct 249137 GAAGATACCCTCAACAGCTGCAAAGGCAACAAGTCGCT 249100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622942745927520