Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq140 136 3e-27 seq406 93.3 3e-14 >seq140 Length=879 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||| ||||||||||||||||||||||||||||| || |||||||| Sbjct 52 AAGCCCGTTCCCTTCGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 111 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 112 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 146 >seq406 Length=409633 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38087 ATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATC 38146 ||| ||||| | | ||| | ||||| ||||| ||||||||||| || ||||||||||| Sbjct 107549 ATTCCCACCACGGAGACGGAGAACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATC 107490 Query 38147 AGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206 || | | || | || || | || || || ||||| || || ||||| ||||| | Sbjct 107489 CGAAAGAGTGCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGG 107430 Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266 || | || || || || || || |||||| || | || || || || || Sbjct 107429 TGGAATTCCCTCCTTATCTTGGATCTTGGTCTTCACGTTATCGATGGTGTCGGAGCTCTC 107370 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||| || || || ||||| || || | || || ||||| |||||||| Sbjct 107369 AACTTCCAAGGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 107319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334944864999332