Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq406 107 2e-18 >seq406 Length=409633 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||||||||| || |||||| | || || || | ||||| | ||||||||||| || Sbjct 106862 AATGCAAATATTCGTTAAGACTCTTACGGGGAAGACGATCACGCTGGAAGTGGAGTCCTC 106921 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||||||| | ||| |||||| || || || ||||| || || ||||| Sbjct 106922 TGACACTATCGACAACGTCAAGACGAAAATCCAAGATAAGGAGGGGATCCCGCCAGACCA 106981 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | ||||||||||| || || | || |||| || || | ||| ||||| Sbjct 106982 GCAACGTCTCATTTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACACTCTCCGACTACAA 107041 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 107042 CATCCAGAAGGAGTCCACACTCCA 107065 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | ||||| ||| | ||||| | ||||| ||| || Sbjct 107319 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAAACGATCACCTTGGAAGTTGAGAGCTCC 107378 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| | || ||||| || ||| || || || || |||||||| || || Sbjct 107379 GACACCATCGA-TAACGTGAAGACCAAGATCCAAGATAAGGAGGGAATTCCACCGGATCA 107437 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | || ||||| || || || | ||||||| ||||||| | |||||||| Sbjct 107438 GCAACGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGCACTCTTTCGGATTACAA 107497 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 ||| || || || ||| || || || || || | || | || || ||||| Sbjct 107498 TATCCAGAAGGAGAGCACCCTTCACTTGGTTCTCCGTCTCCGTGGTGGGAATTA 107551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433324979162180