Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq283 91.5 2e-13 >seq283 Length=1466191 Score = 91.5 bits (100), Expect = 2e-13 Identities = 182/269 (68%), Gaps = 3/269 (1%) Strand=Plus/Minus Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 ||||| || | || || |||| ||||| || ||||||||| |||||||| || | | Sbjct 248907 AGAGAGTAGGTCTCGGAGTGGATGTTCTCAATCATAATTTGGAAGCCGTAGAAGCAACGA 248848 Query 93440 GCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499 ||||| | ||||| || || || | ||| || | || || || || || || Sbjct 248847 GCTTCGGGAATCTGGACCTCGCCGCTGAAGCGCTCCACCAAGTTCTCGTTCACAATGCCG 248788 Query 93500 TCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA-- 93557 || ||||| || || ||||| | | | | || || | ||| ||||| || | Sbjct 248787 TCAGATGCAGCGAAGAAAGCAAGGACACGAGAGATGAAGTAGCGCTCGTCATCGTTCAAA 248728 Query 93558 -GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616 | | || ||| ||| || || || || | |||| |||||| ||||||| || ||| Sbjct 248727 CGGTCATGCCAGTCGTGGAGGTCCTTCGACAAGTCGATCTCTTCGGCAGTCCAGAAGGAT 248668 Query 93617 GCTTCTGCTTTTTTGTACATATCCCATAT 93645 ||||||||||| |||||||| | ||| || Sbjct 248667 GCTTCTGCTTTCTTGTACATTTGCCAGAT 248639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556856818445280