Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq406 125 6e-24 >seq406 Length=409633 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || |||||| | ||||| || ||| | || | ||||| || || | Sbjct 107091 ATGCAGATTTTCGTGAAAACTCTTACCGGAAAGACGATTACGTTGGAAGTCGAGTCCTCT 107150 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || || |||||||| |||||||| ||||| || || || Sbjct 107151 GATACCATTGACAACGTAAAGACGAAGATTCAAGATAAGGAGGGAATTCCGCCAGACCAG 107210 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || ||||| || ||||| |||||| ||| || | || || |||||| Sbjct 107211 CAACGCCTGATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACTCTTTCTGACTACAAC 107270 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| ||||| ||||| Sbjct 107271 ATTCAGAAAGAGTCCAC 107287 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| ||||| ||| || || | ||| || |||| Sbjct 106659 ACTGGCAAGACCATCACCCTTGAGGTGGAGTCCAGTGACACGATCGACAATGTCAAGACG 106718 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| ||||| ||||| || |||||||| || || || ||||| Sbjct 106719 AAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTGATTTTCGCAGGCAAG 106778 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || | |||||| ||| || | |||||||||||||| || ||||| ||||| | || Sbjct 106779 CAACTCGAGGATGGCCGTACTCTGTCCGATTACAACATCCAGAAAGAGTCCACTCTTCAC 106838 Query 22423 TTAGTTTTGCG 22433 | || ||||| Sbjct 106839 CTTGTCTTGCG 106849 Score = 82.4 bits (90), Expect = 6e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || ||||||| || || ||| ||| ||| ||| | ||| | | || Sbjct 106370 ACTGGGAAGACCATCACTCTAGAGGTCGAATCCAGCGACACCATCGACAACGTTAAGACC 106429 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||||||||| || || || || ||| | || || || || || Sbjct 106430 AAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAGCGTTTGATCTTCGCTGGAAAG 106489 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | ||||| || ||| | ||||| || |||||||| || || || || Sbjct 106490 CAGCTTGAGGACGGTCGTACCCTGTCCGACTATAACATTCAGAAGGAGTCTAC 106542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725073971180