Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq405 91.5 3e-13 seq417 84.2 4e-11 >seq405 Length=457542 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 280701 ACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA 280760 |||||||| || || || ||| | ||||| |||||| ||||| ||||| | | || Sbjct 116106 ACTCACTCGCGTATGCGTGGTTTGTCTGGTGGCCAGCGTGTCAAGGTTGTCCTGGCCGCC 116165 Query 280761 -GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCG 280819 |||| |||||| | |||||||| ||||| || ||||||||||||||||| || ||||| Sbjct 116166 TGCTC-GTGGCAGCGTCCTCACGTCATCGTCCTTGACGAGCCTACCAACTACCTCGACCG 116224 Query 280820 CGAGAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCAT 280879 || || || || |||| ||||| | || || | || || | || ||||| Sbjct 116225 TGACTCTCTCGGTGCCCTGAACAAGGCTCTCAAGACCTTCGAGGGTGGTATTGTTGTCAT 116284 Query 280880 TTCTCAC 280886 | ||||| Sbjct 116285 TACTCAC 116291 >seq417 Length=246505 Score = 84.2 bits (92), Expect = 4e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233 |||||||| ||||||||| || |||||||| | || || | ||||| || || ||| Sbjct 153717 TCATTGGAGGCAATGGTGCTGGAAAGTCTACGTTCATTAAGCTTCTGACCGGTGAAACCG 153658 Query 280234 AGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292 || | || || | | | ||||||||||||| | || || | |||| || ||| Sbjct 153657 TT-CCTCAGACTGGGAAGGTCGAGAAGCATCCCAACCTTCGTATCGGTTACATCAAGCAG 153599 Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352 ||||| || | ||| | |||| || ||||| | |||||| | || || |||||||| Sbjct 153598 CACGCCTTGGAACACGTTGAGATGCATCTGGAGAAGACTCCAAGTCAGTATCTTCAGTGG 153539 Query 280353 CGCTATGC 280360 || ||||| Sbjct 153538 CGATATGC 153531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027829267241052