Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05]
572 sequences; 22,032,815 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq406 104 2e-17
>seq406
Length=409633
Score = 104 bits (114), Expect = 2e-17
Identities = 150/209 (72%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||||||||| || | | || | || | ||||| || || |||||||| || |||
Sbjct 106575 ATACCGCCACGCAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCG 106516
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| |||||| || ||||| || || |||||| |||| | |||||| |||||||||
Sbjct 106515 GACAGGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCCGGA 106456
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
||||| || || ||||| ||| || || ||| | | || | ||||||| |||||||
Sbjct 106455 GGAATACCCTCCTTGTCCTGGATC-TTGGTCTTAACGTTGTCGATGGTGTCGCTGGATTC 106397
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCA 114360
||| || | || | || || || ||||
Sbjct 106396 GACCTCTAGAGTGATGGTCTTCCCAGTCA 106368
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | ||| || ||||| ||||||||||| ||
Sbjct 107320 ATACCACCACGGAGACGAAGGACAAGGTGGAGCGTGGACTCTTTCTGAATGTTGTAGTCA 107261
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| |||||| ||| || | || || || ||| | || || || || ||||| ||
Sbjct 107260 GAAAGAGTACGGCCATCCTCCAACTGCTTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGC 107201
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || || || |||||| |||| | |||| ||| || | ||| |||
Sbjct 107200 GGAATTCCCTCCTTATCTTGAATCTTCGTCTTTACGTTGTCAATGGTATCAGAGGACTCG 107141
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||| || ||||| |||||||| || |||||||||||
Sbjct 107140 ACTTCCAACGTAATCGTCTTTCCGGTAAGAGTTTTCACGAAAATCTGCAT 107091
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | ||| || | || | || || ||||| || ||||||||||||
Sbjct 106864 ATTCCACCACGAAGACGCAAGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCG 106805
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| |||||| ||| || ||||| || || ||| | || ||||| || ||||| ||
Sbjct 106804 GACAGAGTACGGCCATCCTCGAGTTGCTTGCCTGCGAAAATCAGACGTTGCTGGTCGGGG 106745
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| |||||| || | | || | ||||| |||| ||
Sbjct 106744 GGAATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATCGTGTCACTGGACTCC 106685
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370
|| || | ||| | || ||||| || || || || ||
Sbjct 106684 ACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGAC 106647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420131471138064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |