Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq283 152 1e-31 >seq283 Length=1466191 Score = 152 bits (168), Expect = 1e-31 Identities = 232/327 (71%), Gaps = 5/327 (2%) Strand=Plus/Plus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || || |||||| | || || ||||| |||||||| || || | ||||| || |||||| Sbjct 249105 CTTGTTGCCTTTGCAGCTGTTGAGGGTATCTTCTTTTCTGGGTCTTTCGCATCGATCTTC 249164 Query 42765 TGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823 ||||| ||| || ||| | |||||| || || |||||||| ||||| || ||| | Sbjct 249165 TGGCTGAAGAAGCGCGGTCT-GATGCCAGGCCTTACCTTCTCTAACGAGCTGATCTCGCG 249223 Query 42824 GGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA 42883 ||||| || || || | |||||||| ||| | || ||||| || |||| ||| Sbjct 249224 TGACGAAGGTCTCCACACTGACTTTGCTTGCTTGCTTTTCTC---TCATCTCAACCACCG 249280 Query 42884 GCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTT 42943 ||| ||| || ||| | ||||||||||||||| || |||||| |||| || Sbjct 249281 CCCCAGCAAGCAGGTCATCCAAGACATCATCACGGAGGCTGTCACCATCGAGCAGGAATT 249340 Query 42944 CCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTA 43003 ||| ||| | | || ||||| | || |||| |||||| | ||||||||| | || Sbjct 249341 CCTGACGGATGCCCTTCCCGTCGCACTTCTCGGTATGAACGCCAGACTCATGTGCCAATA 249400 Query 43004 CATCCAGTACGTCGCCGACCATCTCCT 43030 |||| | | ||||||||| | ||||| Sbjct 249401 CATCGAATTCGTCGCCGATCGCCTCCT 249427 Score = 116 bits (128), Expect = 7e-21 Identities = 526/825 (64%), Gaps = 33/825 (4%) Strand=Plus/Minus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| ||||| || ||||| || | |||||||| || ||| | ||| | | ||| Sbjct 591573 GTTGACCACTTGGAACTCACCGGCGAGCACGCGTCGGGAGTAAACGTTCGAGGTATACGG 591514 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||| | || ||| | ||| || ||||| ||||| ||||| ||||| |||| ||| Sbjct 591513 CTCAAAGCACTCGTTAAAGCCGAGGATCTGACTGGTGCTTGCAGTAGGCATAGGCGCCAC 591454 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 |||||| ||||| | || || ||| || | | ||||| | | ||| ||||| Sbjct 591453 CAGCAGGCTGTTTCGGACACCATGCTGAGCAATCTTGGCTTTGAGCGCATCCCAATCCCA 591394 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 || | | | ||| | || ||| |||||||||| | || || | ||||||| Sbjct 591393 CAAGTCAGT-AGG-CGTCCGGTT-------CCACATGTCATATTGAAGGATCCCCTTGGA 591343 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT--AC--AGC 244385 |||||| ||||||||||||| ||| |||||| || | | | || ||| Sbjct 591342 AACGGGGGAGCCCTCGTAGGTCTCGTACGGACCGAATTCCTTAGATAAATCGGACGAAGC 591283 Query 244386 TCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT 244445 || || || | | ||||||||| ||||| ||| |||||| | |||| Sbjct 591282 AGTC----AGAGCACCATGGTAGATGGTTTCGAAAATCTGGATGTTCAATTGCTTCGCCT 591227 Query 244446 TGCCGCAGGTG--AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCC 244503 | |||| | || || | || || | |||| | || || || || | || || Sbjct 591226 CG--GCAGATTCAAACGGCAAGCGCAAAGCAAGGAAGGCATCAGCAAGACCGTTAACACC 591169 Query 244504 GATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTT 244563 || | ||||| | || || |||| | | || || || |||||||| |||| Sbjct 591168 GAGAGCAATGGGACGATGACGGAGGTTGCTCTTCTTCGCCTCAGGGACGGGGTAGTAGTT 591109 Query 244564 GCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTG 244623 |||||| | |||||| || ||||| | | || ||||| ||| ||| Sbjct 591108 AATGTCGATGATCTTGTTCAGATTGCGAACAAGAACTCGTACGACATCGTGCAGTTTTCC 591049 Query 244624 AAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683 ||||||||||||| | | |||| ||| || || ||| |||||||| Sbjct 591048 AAAGTCGTACTCGCCACG---CGCGGC-------ATCAGCA-AATGTCGG-GAGGGCGAT 591001 Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743 | |||||||||||||| || ||||| || | | ||| | ||||||||||||||| Sbjct 591000 GGAAGCCAGGTTGCAGACAGCAACCTCGTCAGGAGCCGAGTATTCGACAATCTCGGTGCA 590941 Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803 |||||| || || || |||| || || || ||| ||| |||||| | || Sbjct 590940 AAGGTTAGAGCTGCGAATAGTTCCCAAGTTCTTCTGGTTGCTCTTTCTGTTGCAAGAATC 590881 Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863 |||||| ||||| ||||| || |||||| ||| | | | || | ||| || Sbjct 590880 CTTGTACAGCATAAAGGGGTTGCCCGTCTCGGTCTGCGATTCCAAGATAGCATACCAAAG 590821 Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTA 244908 | | ||| ||||| || || ||| || |||| ||| |||||| Sbjct 590820 CTTCTGAGCTTTGACGGTTCTACGACCCCTGCCTTCTTTCTCGTA 590776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944332447974720