Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq406 138 3e-27 seq283 100 7e-16 seq394 98.7 2e-15 >seq406 Length=409633 Score = 138 bits (152), Expect = 3e-27 Identities = 170/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || || | ||| || || ||||| || ||||||| | Sbjct 107089 CCACCACGGAGGCGAAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAG 107030 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || || || || || || | || ||||| || || || ||||| || || ||||| Sbjct 107029 AGTGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAAATGAGACGTTGCTGG---TCTGGC 106973 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| || || ||||| |||||||||| || ||||| || |||| || || || Sbjct 106972 GGGATCCCCTCCTTATCTTGGATTTTCGTCTTGACGTTGTCGATAGTGTCAGAGGACTCC 106913 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||||||||||||||| || |||||||| |||||||| |||||| Sbjct 106912 ACTTCCAGCGTGATCGTCTTCCCCGTAAGAGTCTTAACGAATATTTGCATT 106862 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | |||| ||||| || || |||||||| || || | Sbjct 107545 CCACCACGGAGACGGAGAACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAA 107486 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || || || || ||||| ||||| || ||| ||| Sbjct 107485 AGAGTGCGACCATCTTCCAGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGA 107426 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 ||||| || ||||| ||||| || | |||||||| || || | ||| ||| || Sbjct 107425 ATTCCCTCCTTATCTTGGATCTTGGTCTTCACGTTATCGATGGTGTCGGAGCTC---TCA 107369 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | |||||||| || ||||| |||||||||||||| |||||||| Sbjct 107368 ACTTCCAAGGTGATCGTTTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 107319 >seq283 Length=1466191 Score = 100 bits (110), Expect = 7e-16 Identities = 248/369 (67%), Gaps = 8/369 (2%) Strand=Plus/Minus Query 325964 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 326023 ||||| ||||| ||||| | | ||||| | ||||| | || | ||||| | Sbjct 332755 ACGATGGGCGTAATGAATTCGATTAAGAATTCCGGAATCCTCAACAGGCTCGGGAATTGG 332696 Query 326024 CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 326083 | |||| ||||| |||| || || || || | || ||| |||| ||||||| Sbjct 332695 GTCTGGAGGAAGTTAATGAGCAGTCCCTTGATATGGCTGCCATCATGATCCTGGTCGGTC 332636 Query 326084 ATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGA 326143 |||||||||| || ||||| |||||| | ||| || ||||| | || |||| Sbjct 332635 ATGATCATCAAGTGTCCGTATCGAAGCCCGCGCGTATCGGTGTACTCCTTTTTATGTTGA 332576 Query 326144 AGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACG-G 326201 || |||| ||| || || | ||| ||||||| ||| |||| || || | || | Sbjct 332575 AGTCCGATGAAGTTCTTGATGTTCTGA-ATTTCTTGGTTTTTCGAAAT-CTGGTCAAACG 332518 Query 326202 ATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGAC 326261 | |||||||||||||||| | ||||| ||||||||||| || ||| | ||| ||| Sbjct 332517 ACGCATCGCGGACGTTCAGCAACTTTCCTCGAAGAGGGAAGACACCAAACAAGTCGGGAC 332458 Query 326262 CGACCACGGACAGCCCTGCGATTGC--AAGTGTCGCTGCGGAATCCCCCTCCGTCAGAAT 326319 | || ||||| || || || || || | | ||||| || ||||| |||| || Sbjct 332457 CAACAACGGATCTTCCAGCCATGGCTAAACCTTTG--GCGGAGTCACCCTCGGTCAAGAT 332400 Query 326320 GAGAGTGCA 326328 || ||||| Sbjct 332399 CAGGGTGCA 332391 >seq394 Length=603486 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| | || || || || || | || || || ||||||||| Sbjct 13706 TTCTGGATGTTGTAGTCGCTCAAGGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGATC 13765 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 | |||||| || ||||| || || || |||||||| || | || ||||| || Sbjct 13766 AAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 13825 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 13826 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 13884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179645754607816