Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq283 100 6e-16 >seq283 Length=1466191 Score = 100 bits (110), Expect = 6e-16 Identities = 288/439 (66%), Gaps = 8/439 (2%) Strand=Plus/Plus Query 243319 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 243378 ||||| ||||| | ||||| ||| |||| | ||||| |||||| ||| ||| Sbjct 249123 GTTGAGGGTATCTTCTTTTCTGGGTCTTTCGCATCGATCTTCTGGCTGAAGAAGCGCGGT 249182 Query 243379 GTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAA 243438 ||||||| ||||| | ||||||||| | ||| || ||||| || || ||| Sbjct 249183 CTGATGCCAGGCCTTACCTTCTCTAACGAGCTGATCTCGCGTGACGAAGGTCTCCACACT 249242 Query 243439 CAGTTCGGTGAGCTTATGTAT-TCAAAGCTCCAGAACAAGCTACCATTCGAAACGGTCAA 243497 | || | | |||| | | || | ||| ||| | | || | | ||||| Sbjct 249243 GACTTTGCTT-GCTTGCTTTTCTCTCATCTC---AACCACCGCCCCAGCAAGCAGGTCAT 249298 Query 243498 ACAA---ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCC 243554 ||| |||||||| || || || | ||| |||||||| | || || |||| Sbjct 249299 CCAAGACATCATCACGGAGGCTGTCACCATCGAGCAGGAATTCCTGACGGATGCCCTTCC 249358 Query 243555 ATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGA 243614 | ||| | || |||||| | ||||||| | || |||||||||||||| ||||| Sbjct 249359 CGTCGCACTTCTCGGTATGAACGCCAGACTCATGTGCCAATACATCGAATTCGTCGCCGA 249418 Query 243615 CCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTT 243674 ||| | || | | || || ||| ||| ||| | || ||||||| |||| || Sbjct 249419 TCGCCTCCTCGTTTCTCTCGGAAATGGCAAATACTACCATGCCCAGAACCCGTTTGATTT 249478 Query 243675 TATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTA 243734 ||||| |||||| || | ||||| || |||||||| || |||||||| ||||||| Sbjct 249479 CATGGACAACATTTCCCTACCCGGGAAGACGAACTTCTTTGAGAAGCGTGTTGGTGATTA 249538 Query 243735 TCAACGCCCTGGTGTGATG 243753 || ||||||| ||| Sbjct 249539 CCAGAAGGCTGGTGTCATG 249557 Score = 96.9 bits (106), Expect = 8e-15 Identities = 247/369 (67%), Gaps = 8/369 (2%) Strand=Plus/Minus Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 298144 ||||| ||||| ||||| | | ||||| | ||||| | || | ||||| | Sbjct 332755 ACGATGGGCGTAATGAATTCGATTAAGAATTCCGGAATCCTCAACAGGCTCGGGAATTGG 332696 Query 298145 CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 298204 | |||| ||||| |||| || || || || | || ||| |||| ||||||| Sbjct 332695 GTCTGGAGGAAGTTAATGAGCAGTCCCTTGATATGGCTGCCATCATGATCCTGGTCGGTC 332636 Query 298205 ATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGA 298264 |||||||||| || ||||| |||||| | ||| || ||||| | || |||| Sbjct 332635 ATGATCATCAAGTGTCCGTATCGAAGCCCGCGCGTATCGGTGTACTCCTTTTTATGTTGA 332576 Query 298265 AGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG-CCACGG 298322 || |||| ||| || || | ||| ||||||| ||| |||| || || | | | | Sbjct 332575 AGTCCGATGAAGTTCTTGATGTTCTG-AATTTCTTGGTTTTTCGAAAT-CTGGTCAAACG 332518 Query 298323 ATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGAC 298382 | ||||||||||| |||| | ||||| ||||||||||| || ||| | ||| ||| Sbjct 332517 ACGCATCGCGGACGTTCAGCAACTTTCCTCGAAGAGGGAAGACACCAAACAAGTCGGGAC 332458 Query 298383 CGACCACGGACAGCCCTGCGATTGC--AAGTGTCGCTGCGGAATCCCCCTCCGTCAGAAT 298440 | || ||||| || || || || || | | ||||| || ||||| |||| || Sbjct 332457 CAACAACGGATCTTCCAGCCATGGCTAAACCTTTG--GCGGAGTCACCCTCGGTCAAGAT 332400 Query 298441 GAGAGTGCA 298449 || ||||| Sbjct 332399 CAGGGTGCA 332391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102871917268200