Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq406 95.1 1e-14 seq394 93.3 5e-14 >seq406 Length=409633 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||||||||||| || ||||||||||| | ||||| || | || || Sbjct 107527 ACCAAGTGAAGGGTGCTCTCCTTCTGGATATTGTAATCCGAAAGAGTGCGACCATCTTCC 107468 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||||||||| || ||||| || ||||| || | ||| | | |||||| || | Sbjct 107467 AGCTGCTTACCAGCAAAGATGAGACGTTGCTGATCCGGTGGAATTCCCTCCTTATCTTGG 107408 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || || || | | | | ||||| |||| || || || | ||||| ||| Sbjct 107407 ATCTTGGTCTTCACGTTATCGATGGTGTCGGAGCTC---TCAACTTCCAAGGTGATCGTT 107351 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || ||||| || ||||| ||||| Sbjct 107350 TTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 107319 Score = 91.5 bits (100), Expect = 2e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| || || || | ||| || || |||| || |||||||| |||||||| Sbjct 106537 CTCCTTCTGAATGTTATAGTCGGACAGGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAA 106478 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | ||||||||||| | || | | |||||||||| || | || || | | ||| Sbjct 106477 GATCAAACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC-TGGATCTTGGTCTTAACGT 106419 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | | | |||||||| ||||| || || | |||||||| || || || Sbjct 106418 TGTCGATGGTGTCGCTGGATTCGACCTCTAGAGTGATGGTCTTCCCAGT 106370 >seq394 Length=603486 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || || || || | || || ||||||||||||||||| | Sbjct 13704 CCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGA 13763 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | | ||||||||||| | || | | |||||||||| ||| || |||| ||| | Sbjct 13764 TCAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 13822 Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 13823 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 13882 Query 42198 AAG 42200 ||| Sbjct 13883 AAG 13885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543208916028480