Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq283 116 4e-21 seq406 114 1e-20 seq403 82.4 8e-11 >seq283 Length=1466191 Score = 116 bits (128), Expect = 4e-21 Identities = 356/542 (66%), Gaps = 9/542 (2%) Strand=Plus/Minus Query 154905 ACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGCCTTTTTG 154964 ||||||||||||||||| || || ||| | |||||| ||||||||||| || | Sbjct 590625 ACGCGTTTCATAAACAAGTCTGGAGTCCAGAGAGCGTAGAACAAATCACGAGCTCTAACT 590566 Query 154965 TCTTCAGCGCCCATGTT-TCGCTTTAAATTCAAAAAATCATATATGTCGGCGTGCCACGG 155023 || || ||| ||| | || | | ||| || ||| | | |||| |||||| || Sbjct 590565 TCCTCTTTGCCGTGGTTCTTGCGA-AGGTCCAAGAACTCAAAAACATCGGAGTGCCATGG 590507 Query 155024 CTCTAAATATACGGCCATCGCGCCTTTGCGTTTT---CCTCCTTGATCCACGTGACGCAC 155080 ||| ||||| | ||| | || ||| ||| || |||||||| || || | | | | Sbjct 590506 CTCCAAATAGATGGCAAAAGCACCTGGGCGCTTATTACCTCCTTGGTCTACATACCTCGC 590447 Query 155081 ACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGTGCCACG 155140 | || || || ||||| | || || | | || | | | ||||||||||||| Sbjct 590446 AGTGTTGTTATAGACGCGGAGCATGGGGACAATTCCATTAGAAGAACCGTTGGTGCCACC 590387 Query 155141 TATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCAAACCTCCG-CCGTATT 155199 || | ||| |||||| | | || || || | || | || ||| |||| || Sbjct 590386 GATGTAGGAGCCTGTAGCACGAATTCTGTGGACGTTGAGACCGATGCCACCGGCCGTCTT 590327 Query 155200 T-AGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTC 155258 |||| ||||||| |||| || || || || || |||| ||||| || | ||| Sbjct 590326 GGAGATCATTGCGCA-AGTCTTT-AACGTGTCATAGATGCCTTCAATGCTATCCGCCTTC 590269 Query 155259 AACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAATGTA 155318 | | || |||||| || | |||||| | || || || || ||||||||| Sbjct 590268 ATATCGACCAGGAAACAAGAGGCTAATTGGGCCTGCGGAGTACCAGCGTTAAATAATGTC 590209 Query 155319 GGACTAGCGTGTGTAAACATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCA 155378 || ||| ||||| || || | | | |||| |||||||||||||| ||| Sbjct 590208 GGCGAAGCATGTGTGAAGTACTTCTGAGACATCAAGTGATAAGTTTCGATGGCTTTTTCA 590149 Query 155379 ATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTGAATGCGCTCCGCA 155438 ||||| ||||||||| || | || || ||||||||||||||||| || |||||| Sbjct 590148 ATGTCTTCACCGTGTATGCCAACGGCAACCCGCATCAGCATGTGTTGTGGACGTTCCGCA 590089 Query 155439 AC 155440 || Sbjct 590088 AC 590087 >seq406 Length=409633 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | ||| || ||||| ||||||||||| || | | || || | || Sbjct 107303 AAGGACAAGGTGGAGCGTGGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATC 107244 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || | |||||| ||||| |||| || || |||||||| || |||||||| || || || Sbjct 107243 CTCCAACTGCTTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGCGGAATTCCCTCCTTATC 107184 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || |||||| || | |||||| || || ||||| | || | || Sbjct 107183 TTGAATCTTCGTCTTTACGTTGTCAATGGTATCAGAGGACTCGACTTCCAACGTAATCGT 107124 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| ||||| | |||||| |||||||| ||||| Sbjct 107123 CTTTCCGGTAAGAGTTTTCACGAAAATCTGCAT 107091 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || || |||||||| || | || || || | || Sbjct 107075 AAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATC 107016 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||||| |||||| ||||||| || |||||||| || || || || || || || Sbjct 107015 CTCAAGCTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTTATC 106956 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| ||||| ||| || || | || ||| || |||||||| | || | || Sbjct 106955 TTGGATTTTCGTCTTGACGTTGTCGATAGTGTCAGAGGACTCCACTTCCAGCGTGATCGT 106896 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| || || | ||| || ||||| ||||||||| Sbjct 106895 CTTCCCCGTAAGAGTCTTAACGAATATTTGCATT 106862 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || || |||| || || ||||| || ||||||||||| | | || || | || || Sbjct 106843 ACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTACGGCCATCCTCG 106784 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || |||||||| || |||| || || ||||||||||| ||||| || || || || || Sbjct 106783 AGTTGCTTGCCTGCGAAAATCAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 106724 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 || || ||| ||| || | || |||| || ||||| || | || | ||||||| Sbjct 106723 ATCTTCGTCTTGACATTGTCGATCGTGTCACTGGACTCCACCTCAAGGGTGATGGTCTTG 106664 Query 64415 CCGGTCAAAGTTTTTACGA 64433 || || | || || |||| Sbjct 106663 CCAGTAAGGGTCTTGACGA 106645 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| |||| | || || || || | || || || || |||||||| || || | Sbjct 106573 ACCGCCACGCAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGA 106514 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || |||| ||||||||||| || || | || | ||||||||||| ||||| Sbjct 106513 CAGGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCCGGAGG 106454 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || || | || || | || || || Sbjct 106453 AATACCCTCCTTGTCCTGGATCTTGGTCTTAACGTTGTCGATGGTGTCGCTGGATTCGAC 106394 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCA 64421 |||| ||| | |||||| || |||| Sbjct 106393 CTCTAGAGTGATGGTCTTCCCAGTCA 106368 >seq403 Length=471098 Score = 82.4 bits (90), Expect = 8e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | |||||| || || || |||||||| || | || ||||| |||| Sbjct 10629 AGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACCGTCC 10688 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| ||||| | || | |||||||||||||| || || || || || ||| Sbjct 10689 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCT 10748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499641227539680