Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05]
572 sequences; 22,032,815 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq394 104 2e-17
seq406 93.3 4e-14
>seq394
Length=603486
Score = 104 bits (114), Expect = 2e-17
Identities = 135/183 (74%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| ||||| |||||||| || ||||| | |||
Sbjct 13704 CCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGA 13763
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| | |||||| |||||||| || ||||| || ||||| || | || || || | |||
Sbjct 13764 TCAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 13822
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 13823 -TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 13881
Query 138603 AAA 138605
||
Sbjct 13882 GAA 13884
>seq406
Length=409633
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/207 (71%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||| |||| ||| | || | || | | |||||||| |||||||| |||||| |
Sbjct 106572 CCGCCACGCAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAC 106513
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| |||||| || || || || | |||| | |||||| |||||||||||
Sbjct 106512 AGGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCCGGAGGA 106453
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
||||| || ||||| || | || || |||| ||| || | ||||||| | || || |
Sbjct 106452 ATACCCTCCTTGTC-CTGGATCTTGGTCTTAACGTTG-TCGATGGTGTCGCTGGATTCGA 106395
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCA 138592
|||| | || | || || |||||||
Sbjct 106394 CCTCTAGAGTGATGGTCTTCCCAGTCA 106368
Score = 82.4 bits (90), Expect = 8e-11
Identities = 138/196 (70%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | ||||| ||||| || || || |||| |
Sbjct 107056 GACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCCTCAAGCTGCTTTCCGGCA 106997
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
| || ||||| || ||||| || || || || || || || || |||| || || |
Sbjct 106996 AAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTTATC-TTGGATTTTCGTCTTGAC 106938
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | |||||||| || | ||| | ||| || || || ||||| |
Sbjct 106937 GTTG-TCGATAGTGTCAGAGGACTCCACTTCCAGCGTGATCGTCTTCCCCGTAAGAGTCT 106879
Query 138599 TTACAAAAATCTGCAT 138614
| || || || |||||
Sbjct 106878 TAACGAATATTTGCAT 106863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496258851723840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |