Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq394 104 2e-17 seq406 93.3 4e-14 >seq394 Length=603486 Score = 104 bits (114), Expect = 2e-17 Identities = 135/183 (74%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| ||||| |||||||| || ||||| | ||| Sbjct 13704 CCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGA 13763 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | | |||||| |||||||| || ||||| || ||||| || | || || || | ||| Sbjct 13764 TCAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 13822 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 13823 -TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 13881 Query 138603 AAA 138605 || Sbjct 13882 GAA 13884 >seq406 Length=409633 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||| ||| | || | || | | |||||||| |||||||| |||||| | Sbjct 106572 CCGCCACGCAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAC 106513 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||| || || || || | |||| | |||||| ||||||||||| Sbjct 106512 AGGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCCGGAGGA 106453 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| || | || || |||| ||| || | ||||||| | || || | Sbjct 106452 ATACCCTCCTTGTC-CTGGATCTTGGTCTTAACGTTG-TCGATGGTGTCGCTGGATTCGA 106395 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCA 138592 |||| | || | || || ||||||| Sbjct 106394 CCTCTAGAGTGATGGTCTTCCCAGTCA 106368 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| ||||| || || || |||| | Sbjct 107056 GACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCCTCAAGCTGCTTTCCGGCA 106997 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || ||||| || ||||| || || || || || || || || |||| || || | Sbjct 106996 AAAATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTTATC-TTGGATTTTCGTCTTGAC 106938 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | |||||||| || | ||| | ||| || || || ||||| | Sbjct 106937 GTTG-TCGATAGTGTCAGAGGACTCCACTTCCAGCGTGATCGTCTTCCCCGTAAGAGTCT 106879 Query 138599 TTACAAAAATCTGCAT 138614 | || || || ||||| Sbjct 106878 TAACGAATATTTGCAT 106863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496258851723840