Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq406 107 2e-18 seq394 96.9 3e-15 seq403 95.1 1e-14 >seq406 Length=409633 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || ||||||||||| | |||||| ||| || ||||| || ||||| | Sbjct 107510 CTCCTTCTGGATATTGTAATCCGAAAGAGTGCGACCATCTTCCAGCTGCTTACCAGCAAA 107451 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||| | || |||||||| || || || |||||||| || ||| || ||| | | Sbjct 107450 GATGAGACGTTGCTGATCCGGTGGAATTCCCTCCTTATCTTGGATCTTGGTCTTCACGTT 107391 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| |||||| | ||||| ||||| | ||| | |||||| ||||| ||||| || || Sbjct 107390 ATCGATGGTGTCGGAGCTCTCAACTTCCAAGGTGATCGTTTTTCCGGTGAGAGTCTTGAC 107331 Query 127102 AAAAATCTGCAT 127113 || |||||||| Sbjct 107330 GAAGATCTGCAT 107319 Score = 98.7 bits (108), Expect = 9e-16 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || ||||| || || ||| || || ||| || || ||||| |||||| Sbjct 106542 GTAGACTCCTTCTGAATGTTATAGTCGGACAGGGTACGACCGTCCTCAAGCTGCTTTCCA 106483 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| |||||||| || ||||| || |||||||||||| ||| || ||| Sbjct 106482 GCGAAGATCAAACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGTCTTA 106423 Query 127037 A-GTTGTTCGACGGTGTC 127053 | |||| |||| |||||| Sbjct 106422 ACGTTG-TCGATGGTGTC 106406 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| |||||||| ||||| ||||| || | || || ||| || | ||| ||||| Sbjct 107288 CGTGGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTACGGCCATCCTCCAACTGCTTTCC 107229 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 ||| | |||| || ||||| || || || || |||||||| || || ||| ||| Sbjct 107228 GGCGAAAATCAGGCGTTGCTGGTCTGGCGGAATTCCCTCCTTATCTTGAATCTTCGTCTT 107169 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | ||||| | | ||| || | ||||||||| | || | ||| || ||||| |||| Sbjct 107168 TACGTTGT-CAATGGTATCAGAGGACTCGACTTCCAACGTAATCGTCTTTCCGGTAAGAG 107110 Query 127095 TTTTTACAAAAATCTGCAT 127113 |||| || ||||||||||| Sbjct 107109 TTTTCACGAAAATCTGCAT 107091 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | ||||| || | || | || |||||||| || || ||||||||| Sbjct 106862 TCCACCACGAAGACGCAAGACAAGGTGAAGAGTGGACTCTTTCTGGATGTTGTAATCGGA 106803 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || || || ||| || || || || || ||| | |||| || ||||| ||||| || Sbjct 106802 CAGAGTACGGCCATCCTCGAGTTGCTTGCCTGCGAAAATCAGACGTTGCTGGTCGGGGGG 106743 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| || ||| ||||| | |||| ||||| | ||| || Sbjct 106742 AATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATCGTGTCACTGGACTCCAC 106683 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | ||| | || ||||| || || || || || Sbjct 106682 CTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGAC 106647 >seq394 Length=603486 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || || || ||| || ||||| || |||||| ||||| Sbjct 13706 TTCTGGATGTTGTAGTCGCTCAAGGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGATC 13765 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 || |||||||| || || || || |||||||||||| ||| || ||||| |||| || Sbjct 13766 AAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 13824 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | ||| || |||| ||| | || || || ||||| || || || || Sbjct 13825 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 13884 >seq403 Length=471098 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | ||| ||||| || || || ||||| ||| Sbjct 10614 CCACCACGAAGACGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 10673 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||||| || || ||||| ||||| ||| ||||||| |||||||| ||||| || Sbjct 10674 AGCGTGCGACCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGCGGG 10733 Query 127007 ATGCCCTCCTTGTCCGT 127023 || ||||||||||| || Sbjct 10734 ATACCCTCCTTGTCTGT 10750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497400169280