Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq406 114 1e-20 >seq406 Length=409633 Score = 114 bits (126), Expect = 1e-20 Identities = 121/157 (77%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| ||||| || ||||| ||| | |||| ||||||||||| |||||||| || || || Sbjct 107246 ATCCTCCAACTGCTTTCCGGCGAAAATCAGGCGTTGCTGGTCTGGCGGAATTCCCTCCTT 107187 Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 |||||||| | || || | || | || | ||| || || ||||||||||| | |||| Sbjct 107186 ATCTTGAA-TCTTCGTCTTTACGTTGTCAATGGTATCAGAGGACTCGACTTCCAACGTAA 107128 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || ||||| |||||||| || ||||| ||||| Sbjct 107127 TCGTCTTTCCGGTAAGAGTTTTCACGAAAATCTGCAT 107091 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || || || || || ||||| ||||| || || ||| Sbjct 107092 ATACCACCACGGAGGCGAAGAACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCG 107033 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| || | || ||||| || | || | ||||||||||| ||| Sbjct 107032 GAGAGTGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCTGGC 106973 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || || || |||||||| ||||| |||| || | || | ||||| || ||||| Sbjct 106972 GGGATCCCCTCCTTATCTTGGATTTTCGTCTTGA-CGTTGTCGATAGTGTCAGAGGACTC 106914 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | ||| || || || ||||| || || || |||||||| Sbjct 106913 CACTTCCAGCGTGATCGTCTTCCCCGTAAGAGTCTTAACGAATATTTGCAT 106863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451999968177120