Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq406 118 1e-21 seq394 116 4e-21 seq403 114 1e-20 >seq406 Length=409633 Score = 118 bits (130), Expect = 1e-21 Identities = 144/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || || || | || || |||||||| ||||| || Sbjct 107054 CTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCCTCAAGCTGCTTTCCGGCAAA 106995 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||| | ||| | | |||||| || ||| ||| |||||| ||| Sbjct 106994 AATGAGACGTTGCTGGTCTGGCGGGATCCCCTCCTTATCTTGGATTTTCGTCTTGA-CGT 106936 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || ||||| |||| |||||| || || ||||| || || |||| Sbjct 106935 TGTCGATAGTGTCAGAGGACTCCACTTCCAGCGTGATCGTCTTCCCCGTAAGAGTCTTAA 106876 Query 46581 CAAAGATTTGCATT 46594 | || ||||||||| Sbjct 106875 CGAATATTTGCATT 106862 Score = 113 bits (124), Expect = 5e-20 Identities = 129/171 (75%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || || |||||||| || || || |||| || |||||||| || ||||| Sbjct 106537 CTCCTTCTGAATGTTATAGTCGGACAGGGTACGACCGTCCTCAAGCTGCTTTCCAGCGAA 106478 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | | |||||||||| |||||| |||| | ||| Sbjct 106477 GATCAAACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGTCTT-AACGT 106419 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | | |||||||| ||||| || || | |||||||| || || |||| Sbjct 106418 TGTCGATGGTGTCGCTGGATTCGACCTCTAGAGTGATGGTCTTCCCAGTCA 106368 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/200 (70%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||||||||| || || |||||||| | || || |||||||| || Sbjct 107515 GTGCTCTCCTTCTGGATATTGTAATCCGAAAGAGTGCGACCATCTTCCAGCTGCTTACCA 107456 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 || || || | || ||||| || | || | | |||||| || |||||| |||| Sbjct 107455 GCAAAGATGAGACGTTGCTGATCCGGTGGAATTCCCTCCTTATCTTGGATCTTGGTCTTC 107396 Query 46517 AGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGC 46573 | | | | ||||| |||| || || |||| ||||| ||||| || || || Sbjct 107395 ACGTTATCGATGGTGTCGGAGCTC---TCAACTTCCAAGGTGATCGTTTTTCCGGTGAGA 107339 Query 46574 GTTTTAACAAAGATTTGCAT 46593 || || || ||||| ||||| Sbjct 107338 GTCTTGACGAAGATCTGCAT 107319 >seq394 Length=603486 Score = 116 bits (128), Expect = 4e-21 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| | || || | || ||||||||||| || ||||| | Sbjct 13704 CCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGA 13763 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||| ||||||||||| | || | | |||||||||| |||||| |||||| ||| | Sbjct 13764 TCAAACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 13822 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || |||||||| || || || Sbjct 13823 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 13882 Query 46583 AAG 46585 ||| Sbjct 13883 AAG 13885 >seq403 Length=471098 Score = 114 bits (126), Expect = 1e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| || ||||| | || |||||| ||||| ||||||||||| || ||||| | Sbjct 10625 ACGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGACC 10684 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| ||||||||||| |||||||| ||||| ||||||||||||| ||| | | |||||| Sbjct 10685 GTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGCGGGATACCCTCCTT 10744 Query 46498 GTC 46500 ||| Sbjct 10745 GTC 10747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565234358545440