Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq283 122 9e-23 seq406 105 7e-18 seq394 100 3e-16 seq403 96.9 3e-15 >seq283 Length=1466191 Score = 122 bits (134), Expect = 9e-23 Identities = 261/385 (68%), Gaps = 4/385 (1%) Strand=Plus/Minus Query 132718 ACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCC 132776 ||||| || | ||||| ||||| ||||||||||| ||||| || | || || | || Sbjct 249430 ACGAGGAGGCGATCGGCGACGAATTCGATGTATTGGCACATGAGTCTGGCG-TTCATACC 249372 Query 132777 CAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGT 132836 || || || || || || || || || || |||||||||| ||| || || || Sbjct 249371 GAGAAGTGCGACGGGAAGGGCATCCGTCAGGAATTCCTGCTCGATGGTGACAGCCTCCGT 249312 Query 132837 GACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCA 132896 || ||| || | | | | ||| || || || | ||| ||| | |||||| Sbjct 249311 GATGATGTCTTGGATGACCTGCTTGCTGGGGCGGTGGTTGAGATGAGAGAAAAGCAAGCA 249252 Query 132897 AGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCC 132956 ||||||||| || | || ||||| | || || || ||||| ||| || | ||| Sbjct 249251 AGCAAAGTCAGTGTGGAGACCTTCGTCACGCGAGATCAGCTCGTTAGAGAAGGTAAGGCC 249192 Query 132957 GGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGAC 133016 ||||| || ||||| || || ||||| || || | |||||| || |||||||||| Sbjct 249191 TGGCATCAGACCGCGCTTCTTCAGCCAGAAGATCGATGCGAAAGACCCAGAAAAGAAGAT 249132 Query 133017 GCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTTTGCTGGCGA 133075 ||||| || || || || || || || |||| |||| |||| || ||| || | || Sbjct 249131 ACCCTCAACAGCTGCAAAGGCAACAAGTCGCTGAGCGAAGGTGGACTCCTTGTCTTG-GA 249073 Query 133076 TCCAGCGCAGCGCCCATTCGGCCTT 133100 |||| || | ||||||| ||||| Sbjct 249072 TCCAACGGATAGCCCATTGAGCCTT 249048 >seq406 Length=409633 Score = 105 bits (116), Expect = 7e-18 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||||||||| || || || ||||| || || ||||| | || || ||| || | Sbjct 106862 AATGCAAATATTCGTTAAGACTCTTACGGGGAAGACGATCACGCTGGAAGTGGAGTCCTC 106921 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCC-GA 38359 |||| | | |||| | |||| ||||||| || || ||||| || |||||| || Sbjct 106922 TGACACTATCGACAACG--TCAAGACGAAAATCCAAGATAAGGAGGGGAT-CCCGCCAGA 106978 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| || || ||||||| || || || ||||| || || | || || ||| |||||| Sbjct 106979 CCAGCAACGTCTCATTTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACACTCTCCGACTA 107038 Query 38420 CAACATCCAAAAGGA 38434 ||||||||| ||||| Sbjct 107039 CAACATCCAGAAGGA 107053 Score = 98.7 bits (108), Expect = 1e-15 Identities = 157/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || ||||| |||||| | || || ||| | || Sbjct 107319 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAAACGATCACCTTGGAAGTTGAGAGCTCC 107378 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || |||| || || ||||||||||| | || | Sbjct 107379 GACACCATCGATAACG--TGAAGACCAAGATCCAAGATAAGGAGGGAATTCCACCGGATC 107436 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || ||||| | || || || |||||||| || | ||||| || || |||| Sbjct 107437 AGCAACGTCTCATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGCACTCTTTCGGATTACA 107496 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 | ||||| ||||| ||| || || || ||||| || ||| Sbjct 107497 ATATCCAGAAGGAGAGC-ACCCTTCACTTGGTTCTCCGT 107534 Score = 82.4 bits (90), Expect = 8e-11 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313 |||| || || || || ||||| ||||||||| | || || ||| ||| |||| || | Sbjct 106645 TCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTGGAGTCCAGTGACA-CGATC 106703 Query 38314 AAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | |||| || || | ||||| ||||| |||||| ||||||| || || || Sbjct 106704 GACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTG 106763 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 |||| ||| ||||| || || || || | || || || ||| ||||||||||| || Sbjct 106764 ATTTTCGCAGGCAAGCAACTCGAGGATGGCCGTACTCTGTCCGATTACAACATCCAGAAA 106823 Query 38433 GA 38434 || Sbjct 106824 GA 106825 Score = 82.4 bits (90), Expect = 8e-11 Identities = 151/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || || || || || | || |||||| || | Sbjct 107091 ATGCAGATTTTCGTGAAAACTCTTACCGGAAAGACGATTACGTTGGAAGTCGAGTCCTCT 107150 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| |||||| || || | || || ||||||||||| | |||| Sbjct 107151 GATACCATTGACAACG--TAAAGACGAAGATTCAAGATAAGGAGGGAATTCCGCCAGACC 107208 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || || |||| ||| || || ||| |||| || | || || || ||||||| Sbjct 107209 AGCAACGCCTGATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACTCTTTCTGACTACA 107268 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||| || || || | ||||| || | || || ||| Sbjct 107269 ACATTCAGAAAGAGTCCACGCTCCACCTTGTCCTTCGT 107306 >seq394 Length=603486 Score = 100 bits (110), Expect = 3e-16 Identities = 134/183 (73%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| ||||||| ||| | | ||||| | | Sbjct 13884 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 13825 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| || ||| | ||||| ||||| Sbjct 13824 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTT 13767 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || ||||| || || | || ||| | | ||||||||||||||| | Sbjct 13766 TGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACCTTGAGCGACTACAACATCCAGA 13707 Query 38431 AGG 38433 ||| Sbjct 13706 AGG 13704 >seq403 Length=471098 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || || ||||||| ||||| | || | ||| || || ||||| || Sbjct 10747 GACAAGGAGGGTATCCCGCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAG 10688 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||| ||| ||||||||||||||| ||||| ||||||| ||| | || ||| Sbjct 10687 GACGGTCGCACGCTCTCCGACTACAACATCCAGAAGGAGTCGACGCTCCATCTCGTCCTG 10628 Query 38457 CGT 38459 ||| Sbjct 10627 CGT 10625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500169223764480